RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 DENND3A2RUS2 1198 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 C9IYK1 514 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 POLR2DO15514 142 aaKnown RBP13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 NCK2O43639 380 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 GAS7O60861 476 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 VTNP04004 478 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 OATP04181 439 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 SLFN14P0C7P3 912 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 IBSPP21815 317 aaPredicted RBP13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 CLCN3P51790 818 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 JAK3P52333 1124 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 HYAL1Q12794 435 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 LONRF3Q496Y0 759 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 NAALADL2Q58DX5 795 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 EP400NLQ6ZTU2 488 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 SLC24A5Q71RS6 500 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 FAM228AQ86W67 206 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 GJD3Q8N144 294 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 LINC01465Q8N7H1 131 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 KHSRPQ92945 711 aaKnown RBP eCLIP13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 GJA10Q969M2 543 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 FAM20AQ96MK3 541 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 TEKT3Q9BXF9 490 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 RGS18Q9NS28 235 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 NRBP2Q9NSY0 501 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 CLDND1Q9NY35 253 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 PCDHB7Q9Y5E2 793 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 NLRC5Q86WI3 1866 aa13.68□□□□□ -0.22
CHRDL2-209ENST00000534276 CHMP2AO43633 222 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 PSMD10O75832 226 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 ITGB1P05556 798 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 MYL1P05976 194 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 SFNP31947 248 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 DEKP35659 375 aaKnown RBP13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 LTBRP36941 435 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 UBA7P41226 1012 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 PRKCEQ02156 737 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 TYRO3Q06418 890 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 DSC3Q14574 896 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 CTC1Q2NKJ3 1217 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 LRCH2Q5VUJ6 765 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 EFCAB12Q6NXP0 572 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 KCTD17Q8N5Z5 321 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 SPPL3Q8TCT6 385 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 MAP7D2Q96T17 732 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 UNC45AQ9H3U1 944 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 MAGEF1Q9HAY2 307 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 KCNMB3Q9NPA1 279 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 ANO10Q9NW15 660 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 CCDC39Q9UFE4 941 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 XIRP2A4UGR9 3374 aa13.67□□□□□ -0.22
CHRDL2-209ENST00000534276 ACTN4O43707 911 aaKnown RBP13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 CSPG5O95196 566 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 TDP2O95551 362 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 DNAJB1P25685 340 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 TMOD1P28289 359 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 NLRP11P59045 1033 aaKnown RBP13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 FAM189BP81408 668 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 ZRSR1Q15695 479 aaKnown RBP13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 STX1AQ16623 288 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 UGCGQ16739 394 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 SPECC1Q5M775 1068 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 NT5DC1Q5TFE4 455 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 POTEDQ86YR6 584 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 CEP57L1Q8IYX8 460 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 ZNF710Q8N1W2 664 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 LRRC71Q8N4P6 559 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 KLHL23Q8NBE8 558 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 RDM1Q8NG50 284 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 EPSTI1Q96J88 318 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 ADAMTS10Q9H324 1103 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 RAPGEFL1Q9UHV5 662 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 AKT3Q9Y243 479 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 EVPLQ92817 2033 aa13.66□□□□□ -0.22
CHRDL2-209ENST00000534276 SLC37A4O43826 429 aa13.65□□□□□ -0.22
CHRDL2-209ENST00000534276 GTF2F1P35269 517 aaKnown RBP eCLIP13.65□□□□□ -0.22
CHRDL2-209ENST00000534276 DLX2Q07687 328 aaPredicted RBP13.65□□□□□ -0.22
CHRDL2-209ENST00000534276 E2F4Q16254 413 aa13.65□□□□□ -0.22
CHRDL2-209ENST00000534276 FAM102BQ5T8I3 360 aa13.65□□□□□ -0.22
CHRDL2-209ENST00000534276 B3GNT9Q6UX72 402 aa13.65□□□□□ -0.22
CHRDL2-209ENST00000534276 USP49Q70CQ1 688 aa13.65□□□□□ -0.22
CHRDL2-209ENST00000534276 MIER3Q7Z3K6 550 aa13.65□□□□□ -0.22
CHRDL2-209ENST00000534276 TRIML1Q8N9V2 468 aa13.65□□□□□ -0.22
CHRDL2-209ENST00000534276 SPATA20Q8TB22 786 aa13.65□□□□□ -0.22
CHRDL2-209ENST00000534276 RBSNQ9H1K0 784 aa13.65□□□□□ -0.22
CHRDL2-209ENST00000534276 TMEM161AQ9NX61 479 aa13.65□□□□□ -0.22
CHRDL2-209ENST00000534276 SERTAD1Q9UHV2 236 aa13.65□□□□□ -0.22
CHRDL2-209ENST00000534276 PCDHA12Q9UN75 941 aa13.65□□□□□ -0.22
CHRDL2-209ENST00000534276 FAM50BQ9Y247 325 aa13.65□□□□□ -0.22
CHRDL2-209ENST00000534276 MYH9P35579 1960 aaKnown RBP13.65□□□□□ -0.22
CHRDL2-209ENST00000534276 LOXHD1Q8IVV2 1947 aa13.65□□□□□ -0.22
CHRDL2-209ENST00000534276 TBKBP1A7MCY6 615 aa13.64□□□□□ -0.23
CHRDL2-209ENST00000534276 PI4K2BG5E9Z4 385 aa13.64□□□□□ -0.23
CHRDL2-209ENST00000534276 EIF4BP23588 611 aaKnown RBP13.64□□□□□ -0.23
CHRDL2-209ENST00000534276 SSTR3P32745 418 aaPredicted RBP13.64□□□□□ -0.23
CHRDL2-209ENST00000534276 IRS1P35568 1242 aa13.64□□□□□ -0.23
CHRDL2-209ENST00000534276 TXKP42681 527 aa13.64□□□□□ -0.23
CHRDL2-209ENST00000534276 TBC1D8BQ0IIM8 1120 aa13.64□□□□□ -0.23
CHRDL2-209ENST00000534276 POSTNQ15063 836 aa13.64□□□□□ -0.23
CHRDL2-209ENST00000534276 TARBP2Q15633 366 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms