RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 CCDC148Q8NFR7 591 aa11.52□□□□□ -0.57
CLP1-206ENST00000533905 TNFRSF25Q93038 417 aa11.52□□□□□ -0.57
CLP1-206ENST00000533905 PBXIP1Q96AQ6 731 aa11.52□□□□□ -0.57
CLP1-206ENST00000533905 FAM167AQ96KS9 214 aa11.52□□□□□ -0.57
CLP1-206ENST00000533905 SCLT1Q96NL6 688 aa11.52□□□□□ -0.57
CLP1-206ENST00000533905 POP1Q99575 1024 aaKnown RBP11.52□□□□□ -0.57
CLP1-206ENST00000533905 PHF20Q9BVI0 1012 aa11.52□□□□□ -0.57
CLP1-206ENST00000533905 EIF2AQ9BY44 585 aaKnown RBP11.52□□□□□ -0.57
CLP1-206ENST00000533905 UPF2Q9HAU5 1272 aaKnown RBP11.52□□□□□ -0.57
CLP1-206ENST00000533905 MARCH5Q9NX47 278 aa11.52□□□□□ -0.57
CLP1-206ENST00000533905 SPG21Q9NZD8 308 aa11.52□□□□□ -0.57
CLP1-206ENST00000533905 SUCLA2Q9P2R7 463 aaPredicted RBP11.52□□□□□ -0.57
CLP1-206ENST00000533905 DDX25Q9UHL0 483 aaKnown RBP11.52□□□□□ -0.57
CLP1-206ENST00000533905 LZTS1Q9Y250 596 aa11.52□□□□□ -0.57
CLP1-206ENST00000533905 ARID2Q68CP9 1835 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 DENND4AQ7Z401 1863 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.51□□□□□ -0.57
CLP1-206ENST00000533905 EIF5BO60841 1220 aaKnown RBP11.51□□□□□ -0.57
CLP1-206ENST00000533905 N4BP1O75113 896 aaKnown RBP11.51□□□□□ -0.57
CLP1-206ENST00000533905 EDN1P05305 212 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 SSBP05455 408 aaKnown RBP eCLIP11.51□□□□□ -0.57
CLP1-206ENST00000533905 GALTP07902 379 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 IGFBP6P24592 240 aaPredicted RBP11.51□□□□□ -0.57
CLP1-206ENST00000533905 CA8P35219 290 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 USP11P51784 963 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 JAK3P52333 1124 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 CYP4A11Q02928 519 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 SSRP1Q08945 709 aaKnown RBP11.51□□□□□ -0.57
CLP1-206ENST00000533905 XKR3Q5GH77 459 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 CDR2LQ86X02 465 aaPredicted RBP11.51□□□□□ -0.57
CLP1-206ENST00000533905 VPS52Q8N1B4 723 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 NECAB1Q8N987 351 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 SMG8Q8ND04 991 aaKnown RBP11.51□□□□□ -0.57
CLP1-206ENST00000533905 CCDC12Q8WUD4 166 aaPredicted RBP11.51□□□□□ -0.57
CLP1-206ENST00000533905 SLC22A17Q8WUG5 538 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 RABGGTAQ92696 567 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 TNPO1Q92973 898 aaKnown RBP11.51□□□□□ -0.57
CLP1-206ENST00000533905 DYDC2Q96IM9 177 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 B3GALT6Q96L58 329 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 NRBP2Q9NSY0 501 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 FAM105AQ9NUU6 356 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 MIOSQ9NXC5 875 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 TCEAL9Q9UHQ7 104 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 CEP131Q9UPN4 1083 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 USP20Q9Y2K6 914 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 HES2Q9Y543 173 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 PLXNA3P51805 1871 aa11.51□□□□□ -0.57
CLP1-206ENST00000533905 TTLL13PA6NNM8 815 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 JAK2O60674 1132 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 POMCP01189 267 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 ZSCAN20P17040 1043 aaPredicted RBP11.5□□□□□ -0.57
CLP1-206ENST00000533905 AKAP17AQ02040 695 aaKnown RBP11.5□□□□□ -0.57
CLP1-206ENST00000533905 SIGLEC14Q08ET2 396 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 CTTNQ14247 550 aaKnown RBP11.5□□□□□ -0.57
CLP1-206ENST00000533905 NONOQ15233 471 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLP1-206ENST00000533905 PTPN14Q15678 1187 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 TWF2Q6IBS0 349 aaKnown RBP11.5□□□□□ -0.57
CLP1-206ENST00000533905 TMC5Q6UXY8 1006 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 PIK3AP1Q6ZUJ8 805 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 BMP8AQ7Z5Y6 402 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 TMEM105Q8N8V8 129 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 KREMEN2Q8NCW0 462 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 BICD2Q8TD16 824 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 ASAP3Q8TDY4 903 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 IGSF21Q96ID5 467 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 CPB2Q96IY4 423 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 TBC1D32Q96NH3 1257 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 CDCA3Q99618 268 aaPredicted RBP11.5□□□□□ -0.57
CLP1-206ENST00000533905 LXNQ9BS40 222 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 SH3GLB2Q9NR46 395 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 CYP26B1Q9NR63 512 aa11.5□□□□□ -0.57
CLP1-206ENST00000533905 ZFHX4Q86UP3 3567 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 B4GALT5O43286 388 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 LILRB3O75022 631 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 DEXIO95424 95 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 CXCL14O95715 111 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 TMOD1P28289 359 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 SFNP31947 248 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 PPP2R5CQ13362 524 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 SMC1AQ14683 1233 aaKnown RBP11.49□□□□□ -0.57
CLP1-206ENST00000533905 AMHR2Q16671 573 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 NOMO2Q5JPE7 1267 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 NCAPH2Q6IBW4 605 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 CATSPER4Q7RTX7 472 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 ABI1Q8IZP0 508 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 FBXL6Q8N531 539 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 PRPF31Q8WWY3 499 aaKnown RBP11.49□□□□□ -0.57
CLP1-206ENST00000533905 PPP2R3CQ969Q6 453 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 ZNF274Q96GC6 653 aaPredicted RBP11.49□□□□□ -0.57
CLP1-206ENST00000533905 ZFP42Q96MM3 310 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 IPO9Q96P70 1041 aaKnown RBP11.49□□□□□ -0.57
CLP1-206ENST00000533905 GCOM2Q9BZD3 368 aaPredicted RBP11.49□□□□□ -0.57
CLP1-206ENST00000533905 DHX33Q9H6R0 707 aaKnown RBP11.49□□□□□ -0.57
CLP1-206ENST00000533905 NGRNQ9NPE2 291 aaKnown RBP11.49□□□□□ -0.57
CLP1-206ENST00000533905 AGPAT5Q9NUQ2 364 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 PCDHB2Q9Y5E7 798 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 COL4A3BPQ9Y5P4 624 aa11.49□□□□□ -0.57
CLP1-206ENST00000533905 CACNA1HO95180 2353 aa11.48□□□□□ -0.57
CLP1-206ENST00000533905 H0Y858 1186 aa11.48□□□□□ -0.57
CLP1-206ENST00000533905 NARSO43776 548 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms