RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 CUL3Q13618 768 aa7.46□□□□□ -1.21
CTNND1-236ENST00000533667 TXNRD1Q16881 649 aa7.46□□□□□ -1.21
CTNND1-236ENST00000533667 CCDC144BQ3MJ40 725 aa7.46□□□□□ -1.21
CTNND1-236ENST00000533667 CIAPIN1Q6FI81 312 aa7.46□□□□□ -1.21
CTNND1-236ENST00000533667 CDKL3Q8IVW4 592 aaPredicted RBP7.46□□□□□ -1.21
CTNND1-236ENST00000533667 KIRREL3Q8IZU9 778 aa7.46□□□□□ -1.21
CTNND1-236ENST00000533667 KCTD17Q8N5Z5 321 aa7.46□□□□□ -1.21
CTNND1-236ENST00000533667 PSPC1Q8WXF1 523 aaKnown RBP7.46□□□□□ -1.21
CTNND1-236ENST00000533667 HSPH1Q92598 858 aa7.46□□□□□ -1.21
CTNND1-236ENST00000533667 NUP85Q9BW27 656 aa7.46□□□□□ -1.21
CTNND1-236ENST00000533667 MRPL46Q9H2W6 279 aaKnown RBP7.46□□□□□ -1.21
CTNND1-236ENST00000533667 NARFQ9UHQ1 456 aa7.46□□□□□ -1.21
CTNND1-236ENST00000533667 STAP1Q9ULZ2 295 aa7.46□□□□□ -1.21
CTNND1-236ENST00000533667 MINPP1Q9UNW1 487 aa7.46□□□□□ -1.21
CTNND1-236ENST00000533667 UBE4BO95155 1302 aa7.46□□□□□ -1.21
CTNND1-236ENST00000533667 CCDC22O60826 627 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 TRPA1O75762 1119 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 GNAT1P11488 350 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 COPS2P61201 443 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 STAT4Q14765 748 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 DRAP1Q14919 205 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-236ENST00000533667 LRIG3Q6UXM1 1119 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 DSTYKQ6XUX3 929 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 ARHGAP27Q6ZUM4 889 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 PRPF38AQ8NAV1 312 aaKnown RBP7.46□□□□□ -1.22
CTNND1-236ENST00000533667 NSUN6Q8TEA1 469 aaKnown RBP7.46□□□□□ -1.22
CTNND1-236ENST00000533667 TRIM62Q9BVG3 475 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 UBN1Q9NPG3 1134 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 ETAA1Q9NY74 926 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 PNPLA6Q8IY17 1366 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 CROCC2H7BZ55 1655 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 CFLARO15519 480 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 SRGAP2O75044 1071 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 GH2P01242 217 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 EEF1B2P24534 225 aaKnown RBP7.46□□□□□ -1.22
CTNND1-236ENST00000533667 SDC4P31431 198 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 COPB2P35606 906 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 SOX5P35711 763 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 CRKP46108 304 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 ARHGDIAP52565 204 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 ITPRIPL1Q6GPH6 555 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 GRAMD4Q6IC98 578 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 SLC30A9Q6PML9 568 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 SHC4Q6S5L8 630 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 SCARA5Q6ZMJ2 495 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 ELOA2Q8IYF1 753 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-236ENST00000533667 OR6B3Q8NGW1 331 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 NEDD1Q8NHV4 660 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 TUFT1Q9NNX1 390 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 KLHL8Q9P2G9 620 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-236ENST00000533667 A0A1B0GTH6 734 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 FRMD3A2A2Y4 597 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 E9PMD0 336 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 CHGBP05060 677 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 SRGAP2CP0DJJ0 459 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 BRAFP15056 766 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 ZNF18P17022 549 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 EEF1DP29692 281 aaKnown RBP7.46□□□□□ -1.22
CTNND1-236ENST00000533667 CDC27P30260 824 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 ELF1P32519 619 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 IFNA8P32881 189 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 GCLMP48507 274 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 SERPINB4P48594 390 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 GPC3P51654 580 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 PSMC5P62195 406 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 AP2B1P63010 937 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 EXOSC10Q01780 885 aaKnown RBP7.46□□□□□ -1.22
CTNND1-236ENST00000533667 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.46□□□□□ -1.22
CTNND1-236ENST00000533667 KSR1Q8IVT5 923 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 THEM5Q8N1Q8 247 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 OXER1Q8TDS5 423 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 PIGOQ8TEQ8 1089 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 USP33Q8TEY7 942 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 RMDN3Q96TC7 470 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 MTRQ99707 1265 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 ZNF341Q9BYN7 854 aa7.46□□□□□ -1.22
CTNND1-236ENST00000533667 CPDO75976 1380 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 PXDNLA1KZ92 1463 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 GSG1L2A8MUP6 293 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 AP3B1O00203 1094 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 PRR29P0C7W0 189 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 MCF2P10911 925 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 PCYT1AP49585 367 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 ARFIP2P53365 341 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 POLE2P56282 527 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 BEND6Q5SZJ8 279 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-236ENST00000533667 BEST2Q8NFU1 509 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 ABTB1Q969K4 478 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-236ENST00000533667 PLA2G12BQ9BX93 195 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 FOXP3Q9BZS1 431 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 KRT82Q9NSB4 513 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 ZDHHC9Q9Y397 364 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 USP31Q70CQ4 1352 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 CYP27B1O15528 508 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 EYA4O95677 639 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 FTLP02792 175 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-236ENST00000533667 YWHAHQ04917 246 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-236ENST00000533667 BYSLQ13895 437 aaKnown RBP7.45□□□□□ -1.22
CTNND1-236ENST00000533667 EPHA7Q15375 998 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 MAPRE2Q15555 327 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms