RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 PBX3P40426 434 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 CLCN3P51790 818 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 NLRP11P59045 1033 aaKnown RBP9.77□□□□□ -0.85
COPB1-210ENST00000533533 TPRNQ4KMQ1 711 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 EARS2Q5JPH6 523 aaKnown RBP9.77□□□□□ -0.85
COPB1-210ENST00000533533 MCTP1Q6DN14 999 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 EFCAB12Q6NXP0 572 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 TMC7Q7Z402 723 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 ZBTB33Q86T24 672 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 ECHDC2Q86YB7 292 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 HSCBQ8IWL3 235 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 ZNF710Q8N1W2 664 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 LINC01465Q8N7H1 131 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 MRPL43Q8N983 215 aaKnown RBP9.77□□□□□ -0.85
COPB1-210ENST00000533533 CASP10Q92851 521 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 GJA10Q969M2 543 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 MAP7D2Q96T17 732 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 IRF2BPLQ9H1B7 796 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 SPG21Q9NZD8 308 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 GABBR1Q9UBS5 961 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 NR2E1Q9Y466 385 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 CACNA1AO00555 2505 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 A0A0U1RQF3 1178 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 C2orf71A6NGG8 1288 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 MSH4O15457 936 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 GFRA3O60609 400 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 EOMESO95936 686 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 PDGFBP01127 241 aaPredicted RBP9.76□□□□□ -0.85
COPB1-210ENST00000533533 HSP90AA1P07900 732 aaKnown RBP9.76□□□□□ -0.85
COPB1-210ENST00000533533 NUBP1P53384 320 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 ITIH3Q06033 890 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 SMC1AQ14683 1233 aaKnown RBP9.76□□□□□ -0.85
COPB1-210ENST00000533533 CLLU1OSQ5K130 101 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 LRCH2Q5VUJ6 765 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 CES5AQ6NT32 575 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 LRRC71Q8N4P6 559 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 RNF169Q8NCN4 708 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 KREMEN2Q8NCW0 462 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 FBXO18Q8NFZ0 1043 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 ATOH1Q92858 354 aaPredicted RBP9.76□□□□□ -0.85
COPB1-210ENST00000533533 FAM167AQ96KS9 214 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 RIPOR3Q96MK2 946 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 NECTIN4Q96NY8 510 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 NAP1L4Q99733 375 aaKnown RBP9.76□□□□□ -0.85
COPB1-210ENST00000533533 TEKT3Q9BXF9 490 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 ADAM7Q9H2U9 754 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 TSHZ2Q9NRE2 1034 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 FAM86C1Q9NVL1 165 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 CDH22Q9UJ99 828 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 HCFC2Q9Y5Z7 792 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 CEP250Q9BV73 2442 aa9.76□□□□□ -0.85
COPB1-210ENST00000533533 WDR64B1ANS9 1081 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 C2CD4DB7Z1M9 353 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 K7ELQ4 463 aaPredicted RBP9.75□□□□□ -0.85
COPB1-210ENST00000533533 SLC37A4O43826 429 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 ZNF862O60290 1169 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 OATP04181 439 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 DARSP14868 501 aaKnown RBP9.75□□□□□ -0.85
COPB1-210ENST00000533533 GCFC2P16383 781 aaKnown RBP9.75□□□□□ -0.85
COPB1-210ENST00000533533 GPC3P51654 580 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 MTMR3Q13615 1198 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 Q4G0T1 1027 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 LARP1BQ659C4 914 aaKnown RBP9.75□□□□□ -0.85
COPB1-210ENST00000533533 ZNF598Q86UK7 904 aaKnown RBP9.75□□□□□ -0.85
COPB1-210ENST00000533533 UBALD2Q8IYN6 164 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 SLC39A11Q8N1S5 342 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 HELQQ8TDG4 1101 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 LENG9Q96B70 501 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 ZNF668Q96K58 619 aaPredicted RBP9.75□□□□□ -0.85
COPB1-210ENST00000533533 SNX27Q96L92 541 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 POMKQ9H5K3 350 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 DISC1Q9NRI5 854 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 NRBP2Q9NSY0 501 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 DACT1Q9NYF0 836 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 NOL7Q9UMY1 257 aaKnown RBP9.75□□□□□ -0.85
COPB1-210ENST00000533533 SORCS3Q9UPU3 1222 aa9.75□□□□□ -0.85
COPB1-210ENST00000533533 DCHS1Q96JQ0 3298 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 CYP3A7-CYP3A51PA0A087WV96 503 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 VPS37CA5D8V6 355 aaPredicted RBP9.74□□□□□ -0.85
COPB1-210ENST00000533533 NT5C1B-RDH14C9J2C7 533 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 H0Y858 1186 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 EDIL3O43854 480 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 CLASP2O75122 1294 aaKnown RBP9.74□□□□□ -0.85
COPB1-210ENST00000533533 BAG4O95429 457 aaKnown RBP9.74□□□□□ -0.85
COPB1-210ENST00000533533 BRD1O95696 1058 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 CYP3A7P24462 503 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 MCM7P33993 719 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 ALDH7A1P49419 539 aaKnown RBP9.74□□□□□ -0.85
COPB1-210ENST00000533533 BCAR1P56945 870 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 PRKCEQ02156 737 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 TBC1D8BQ0IIM8 1120 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 BMS1Q14692 1282 aaKnown RBP9.74□□□□□ -0.85
COPB1-210ENST00000533533 MOXD1Q6UVY6 613 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 MIER3Q7Z3K6 550 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 SLC5A5Q92911 643 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 TNFRSF25Q93038 417 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 TMEM169Q96HH4 297 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 SCLT1Q96NL6 688 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 MRPL9Q9BYD2 267 aaKnown RBP9.74□□□□□ -0.85
COPB1-210ENST00000533533 FOXP1Q9H334 677 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms