RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 TAB2Q9NYJ8 693 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 CDV3Q9UKY7 258 aaKnown RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 SAR1BQ9Y6B6 198 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 LRRIQ3A6PVS8 624 aaPredicted RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 PYGLP06737 847 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 LDHBP07195 334 aaKnown RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 CD44P16070 742 aaKnown RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 KRT2P35908 639 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 MNAT1P51948 309 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 GTF2A2P52657 109 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 COPB1P53618 953 aaKnown RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 USP14P54578 494 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 KRT83P78385 493 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 CUL4BQ13620 913 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 ELOAQ14241 798 aaKnown RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 KRT31Q15323 416 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 TRIM68Q6AZZ1 485 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 HHIPL2Q6UWX4 724 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 CEP68Q76N32 757 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 RGL4Q8IZJ4 473 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 CMTR1Q8N1G2 835 aaKnown RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 TAB3Q8N5C8 712 aaPredicted RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 GIMAP7Q8NHV1 300 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 SYMPKQ92797 1274 aaKnown RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 CABS1Q96KC9 395 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 TCHPQ9BT92 498 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 ZNF700Q9H0M5 742 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 RNF41Q9H4P4 317 aaPredicted RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 HAUS4Q9H6D7 363 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 PLCB1Q9NQ66 1216 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 ATP8A2Q9NTI2 1148 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 RMND1Q9NWS8 449 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 CLEC11AQ9Y240 323 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 SNCAIPQ9Y6H5 919 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 COL2A1P02458 1487 aaPredicted RBP5.87□□□□□ -1.47
CKAP5-212ENST00000533413 KCNJ18B7U540 433 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 NEBLO76041 1014 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 PRPF6O94906 941 aaKnown RBP5.87□□□□□ -1.47
CKAP5-212ENST00000533413 ZNF24P17028 368 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 CASP1P29466 404 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 CTCFP49711 727 aaPredicted RBP5.87□□□□□ -1.47
CKAP5-212ENST00000533413 BCAMP50895 628 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 ERVK-24P63145 666 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 FKBP1BP68106 108 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 CACNB2Q08289 660 aaPredicted RBP5.87□□□□□ -1.47
CKAP5-212ENST00000533413 PAK1Q13153 545 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 KCNJ12Q14500 433 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 PKN1Q16512 942 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 SLC45A4Q5BKX6 768 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 MFSD14BQ5SR56 506 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 CCDC122Q5T0U0 273 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 FKBP1CQ5VVH2 108 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 APTXQ7Z2E3 356 aaKnown RBP5.87□□□□□ -1.47
CKAP5-212ENST00000533413 TPH2Q8IWU9 490 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 FANCBQ8NB91 859 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 OR8K1Q8NGG5 319 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 FAM76AQ8TAV0 307 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 HOOK2Q96ED9 719 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 BICD1Q96G01 975 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 CAPZA3Q96KX2 299 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 SRA1Q9HD15 236 aaKnown RBP5.87□□□□□ -1.47
CKAP5-212ENST00000533413 LIMA1Q9UHB6 759 aaKnown RBP5.87□□□□□ -1.47
CKAP5-212ENST00000533413 LUC7L2Q9Y383 392 aaKnown RBP5.87□□□□□ -1.47
CKAP5-212ENST00000533413 LAMA4Q16363 1823 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 EME2A4GXA9 379 aaPredicted RBP5.87□□□□□ -1.47
CKAP5-212ENST00000533413 PDLIM1O00151 329 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 KRT86O43790 486 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 COBLO75128 1261 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 NDUFA10O95299 355 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 TFRCP02786 760 aaKnown RBP5.87□□□□□ -1.47
CKAP5-212ENST00000533413 CAPN3P20807 821 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 ATP6V1E1P36543 226 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 ARHGAP25P42331 645 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 DPYDQ12882 1025 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 TNFAIP1Q13829 316 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 PDE1CQ14123 709 aaPredicted RBP5.87□□□□□ -1.47
CKAP5-212ENST00000533413 DLGAP5Q15398 846 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 ZNF174Q15697 407 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 ANKS3Q6ZW76 656 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 YTHDF3Q7Z739 585 aaKnown RBP5.87□□□□□ -1.47
CKAP5-212ENST00000533413 SLC44A2Q8IWA5 706 aaPredicted RBP5.87□□□□□ -1.47
CKAP5-212ENST00000533413 MAGEB6Q8N7X4 407 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 OR8H1Q8NGG4 311 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 NELFBQ8WX92 580 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 STAMQ92783 540 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 HHIPL1Q96JK4 782 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 PRM3Q9NNZ6 103 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 KCNQ5Q9NR82 932 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 METTL5Q9NRN9 209 aaKnown RBP5.87□□□□□ -1.47
CKAP5-212ENST00000533413 CREBZFQ9NS37 354 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 SPATS2LQ9NUQ6 558 aaKnown RBP5.87□□□□□ -1.47
CKAP5-212ENST00000533413 GTF2IRD1Q9UHL9 959 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 RWDD2AQ9UIY3 292 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 TRIM17Q9Y577 477 aa5.87□□□□□ -1.47
CKAP5-212ENST00000533413 DNMT3AQ9Y6K1 912 aaPredicted RBP5.87□□□□□ -1.47
CKAP5-212ENST00000533413 USP17L15C9J2P7 530 aa5.86□□□□□ -1.47
CKAP5-212ENST00000533413 USP17L10C9JJH3 530 aa5.86□□□□□ -1.47
CKAP5-212ENST00000533413 USP17L13C9JLJ4 530 aa5.86□□□□□ -1.47
CKAP5-212ENST00000533413 USP17L12C9JPN9 530 aa5.86□□□□□ -1.47
CKAP5-212ENST00000533413 USP17L11C9JVI0 530 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms