RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CCDC14Q49A88 953 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 RC3H1Q5TC82 1133 aaKnown RBP13.11□□□□□ -0.31
BDNF-218ENST00000533246 VCXQ9H320 206 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 IL17RBQ9NRM6 502 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 PPLO60437 1756 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 PALM3A6NDB9 673 aaPredicted RBP13.1□□□□□ -0.31
BDNF-218ENST00000533246 CLDN3O15551 220 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 SART1O43290 800 aaKnown RBP13.1□□□□□ -0.31
BDNF-218ENST00000533246 MYBL1P10243 752 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 MAGOHP61326 146 aaKnown RBP13.1□□□□□ -0.31
BDNF-218ENST00000533246 IRX4P78413 519 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 SEPT6Q14141 434 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 SUPT20HL1Q3ZLR7 823 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 FAM160B1Q5W0V3 765 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 OR6B2Q6IFH4 312 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 C1orf54Q8WWF1 131 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 INTS2Q9H0H0 1204 aaKnown RBP13.1□□□□□ -0.31
BDNF-218ENST00000533246 PCSK1NQ9UHG2 260 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 ZRANB2O95218 330 aaKnown RBP eCLIP13.1□□□□□ -0.31
BDNF-218ENST00000533246 COPB2P35606 906 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 PLA2G4FQ68DD2 849 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 AGBL1Q96MI9 1066 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 ELAC2Q9BQ52 826 aaKnown RBP13.1□□□□□ -0.31
BDNF-218ENST00000533246 RBM12Q9NTZ6 932 aaKnown RBP13.1□□□□□ -0.31
BDNF-218ENST00000533246 SPATA31A5Q5VU36 1347 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 SPATA31A7Q8IWB4 1347 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 HNRNPCP07910 306 aaKnown RBP eCLIP13.1□□□□□ -0.31
BDNF-218ENST00000533246 GALCP54803 685 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 GPC5P78333 572 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 APBA1Q02410 837 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 FAM47EQ6ZV65 393 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 CATSPER3Q86XQ3 398 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 TRIM50Q86XT4 487 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 CCNYQ8ND76 341 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 OR2W6PQ8NHA6 318 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 PIM2Q9P1W9 311 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 ARHGEF28Q8N1W1 1705 aaKnown RBP13.1□□□□□ -0.31
BDNF-218ENST00000533246 ZNF18P17022 549 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 ACOT2P49753 483 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 BAATQ14032 418 aaPredicted RBP13.1□□□□□ -0.31
BDNF-218ENST00000533246 VPS72Q15906 364 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 SLC27A3Q5K4L6 730 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 LGSNQ5TDP6 509 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 NUGGCQ68CJ6 796 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 CCDC62Q6P9F0 684 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 RNF10Q8N5U6 811 aaKnown RBP13.1□□□□□ -0.31
BDNF-218ENST00000533246 PPFIBP2Q8ND30 876 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 CDHR1Q96JP9 859 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 PRMT6Q96LA8 375 aaPredicted RBP13.1□□□□□ -0.31
BDNF-218ENST00000533246 RUNDC3BQ96NL0 473 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 CRAMP1Q96RY5 1269 aa13.1□□□□□ -0.31
BDNF-218ENST00000533246 EYA4O95677 639 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 MYCP01106 439 aaPredicted RBP13.09□□□□□ -0.31
BDNF-218ENST00000533246 HDLBPQ00341 1268 aaKnown RBP13.09□□□□□ -0.31
BDNF-218ENST00000533246 GUCY1A3Q02108 690 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 LRRC14Q15048 493 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 PPP6R3Q5H9R7 873 aaPredicted RBP13.09□□□□□ -0.31
BDNF-218ENST00000533246 THEMIS2Q5TEJ8 643 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 ALS2CLQ60I27 953 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 HEXIM2Q96MH2 286 aaKnown RBP13.09□□□□□ -0.31
BDNF-218ENST00000533246 FAM118BQ9BPY3 351 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 PSD3Q9NYI0 1048 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 A0A087X0T9 212 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 I3L4J1 428 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 EVI5O60447 810 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 STK10O94804 968 aaKnown RBP13.09□□□□□ -0.31
BDNF-218ENST00000533246 FAM228BP0C875 321 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 CARSP49589 748 aaKnown RBP13.09□□□□□ -0.31
BDNF-218ENST00000533246 YWHAEP62258 255 aaKnown RBP13.09□□□□□ -0.31
BDNF-218ENST00000533246 GRB10Q13322 594 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 SLC18A3Q16572 532 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 HIBCHQ6NVY1 386 aaPredicted RBP13.09□□□□□ -0.31
BDNF-218ENST00000533246 RHOT2Q8IXI1 618 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 CCDC197Q8NCU1 140 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 CYP2W1Q8TAV3 490 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 NLRP7Q8WX94 980 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 P3H4Q92791 437 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 PNKPQ96T60 521 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 KIFC3Q9BVG8 833 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 NOC2LQ9Y3T9 749 aaKnown RBP13.09□□□□□ -0.31
BDNF-218ENST00000533246 BMP6P22004 513 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 GSCP56915 257 aaPredicted RBP13.09□□□□□ -0.31
BDNF-218ENST00000533246 MTMR2Q13614 643 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 STRIP1Q5VSL9 837 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 GBP5Q96PP8 586 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 NUDT12Q9BQG2 462 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 NACA2Q9H009 215 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 NUB1Q9Y5A7 615 aa13.09□□□□□ -0.31
BDNF-218ENST00000533246 A0A0U1RQJ8 604 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 F5H423 210 aaPredicted RBP13.08□□□□□ -0.32
BDNF-218ENST00000533246 GYS1P13807 737 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 CA4P22748 312 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 PPP4CP60510 307 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 NFX1Q12986 1120 aaKnown RBP13.08□□□□□ -0.32
BDNF-218ENST00000533246 SH2D4BQ5SQS7 431 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 DCLK2Q8N568 766 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 LRRC8CQ8TDW0 803 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 TRIM11Q96F44 468 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 NUP85Q9BW27 656 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 MRPL47Q9HD33 250 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms