RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 ZBP1Q9H171 429 aa20.68■□□□□ 0.9
SSSCA1-206ENST00000531405 ADAM7Q9H2U9 754 aa20.68■□□□□ 0.9
SSSCA1-206ENST00000531405 TBC1D13Q9NVG8 400 aa20.68■□□□□ 0.9
SSSCA1-206ENST00000531405 KCNJ14Q9UNX9 436 aa20.68■□□□□ 0.9
SSSCA1-206ENST00000531405 PLXNA3P51805 1871 aa20.68■□□□□ 0.9
SSSCA1-206ENST00000531405 C2CD4DB7Z1M9 353 aa20.67■□□□□ 0.9
SSSCA1-206ENST00000531405 PTPN5P54829 565 aa20.67■□□□□ 0.9
SSSCA1-206ENST00000531405 RARS2Q5T160 578 aaKnown RBP20.67■□□□□ 0.9
SSSCA1-206ENST00000531405 CES5AQ6NT32 575 aa20.67■□□□□ 0.9
SSSCA1-206ENST00000531405 CATSPER4Q7RTX7 472 aa20.67■□□□□ 0.9
SSSCA1-206ENST00000531405 ZNF579Q8NAF0 562 aaKnown RBP20.67■□□□□ 0.9
SSSCA1-206ENST00000531405 FEZF2Q8TBJ5 459 aa20.67■□□□□ 0.9
SSSCA1-206ENST00000531405 TRAIPQ9BWF2 469 aa20.67■□□□□ 0.9
SSSCA1-206ENST00000531405 GBP3Q9H0R5 595 aa20.67■□□□□ 0.9
SSSCA1-206ENST00000531405 NRDE2Q9H7Z3 1164 aa20.67■□□□□ 0.9
SSSCA1-206ENST00000531405 FAM105AQ9NUU6 356 aa20.67■□□□□ 0.9
SSSCA1-206ENST00000531405 DNAJB4Q9UDY4 337 aa20.67■□□□□ 0.9
SSSCA1-206ENST00000531405 NR2E1Q9Y466 385 aa20.67■□□□□ 0.9
SSSCA1-206ENST00000531405 CYP46A1Q9Y6A2 500 aa20.67■□□□□ 0.9
SSSCA1-206ENST00000531405 ZFHX2Q9C0A1 2572 aaPredicted RBP20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 B4GALT3O60512 393 aa20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 DTNBO60941 627 aa20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 EPCAMP16422 314 aa20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 NPEPPSP55786 919 aa20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 PSMC5P62195 406 aa20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 ITIH3Q06033 890 aa20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 LETM2Q2VYF4 491 aa20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 NOMO2Q5JPE7 1267 aa20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 MOXD1Q6UVY6 613 aa20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 GLB1LQ6UWU2 654 aa20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 KREMEN2Q8NCW0 462 aa20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 ZNF274Q96GC6 653 aaPredicted RBP20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 IGSF21Q96ID5 467 aa20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 INO80BQ9C086 356 aaPredicted RBP20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 SMOC2Q9H3U7 446 aa20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 IFT122Q9HBG6 1241 aa20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 CYP26B1Q9NR63 512 aa20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 VAV3Q9UKW4 847 aa20.66■□□□□ 0.9
SSSCA1-206ENST00000531405 OFD1O75665 1012 aa20.65■□□□□ 0.9
SSSCA1-206ENST00000531405 GALTP07902 379 aa20.65■□□□□ 0.9
SSSCA1-206ENST00000531405 RNASELQ05823 741 aaKnown RBP20.65■□□□□ 0.9
SSSCA1-206ENST00000531405 KRT25Q7Z3Z0 450 aa20.65■□□□□ 0.9
SSSCA1-206ENST00000531405 NECTIN4Q96NY8 510 aa20.65■□□□□ 0.9
SSSCA1-206ENST00000531405 VN1R3Q9BXE9 311 aa20.65■□□□□ 0.9
SSSCA1-206ENST00000531405 SLKQ9H2G2 1235 aaPredicted RBP20.65■□□□□ 0.9
SSSCA1-206ENST00000531405 BMP2KQ9NSY1 1161 aaPredicted RBP20.65■□□□□ 0.9
SSSCA1-206ENST00000531405 FAM86C1Q9NVL1 165 aa20.65■□□□□ 0.9
SSSCA1-206ENST00000531405 WRAP73Q9P2S5 460 aaPredicted RBP20.65■□□□□ 0.9
SSSCA1-206ENST00000531405 BRD1O95696 1058 aa20.64■□□□□ 0.89
SSSCA1-206ENST00000531405 CTSAP10619 480 aa20.64■□□□□ 0.89
SSSCA1-206ENST00000531405 SKIP12755 728 aa20.64■□□□□ 0.89
SSSCA1-206ENST00000531405 AVPR2P30518 371 aa20.64■□□□□ 0.89
SSSCA1-206ENST00000531405 SLC11A1P49279 550 aa20.64■□□□□ 0.89
SSSCA1-206ENST00000531405 BMS1Q14692 1282 aaKnown RBP20.64■□□□□ 0.89
SSSCA1-206ENST00000531405 GALNT17Q6IS24 598 aa20.64■□□□□ 0.89
SSSCA1-206ENST00000531405 DDX53Q86TM3 631 aaKnown RBP20.64■□□□□ 0.89
SSSCA1-206ENST00000531405 ZNF280BQ86YH2 543 aa20.64■□□□□ 0.89
SSSCA1-206ENST00000531405 TMEM87AQ8NBN3 555 aa20.64■□□□□ 0.89
SSSCA1-206ENST00000531405 TMEM143Q96AN5 459 aa20.64■□□□□ 0.89
SSSCA1-206ENST00000531405 PRRX2Q99811 253 aa20.64■□□□□ 0.89
SSSCA1-206ENST00000531405 AGPAT5Q9NUQ2 364 aa20.64■□□□□ 0.89
SSSCA1-206ENST00000531405 PCDHB2Q9Y5E7 798 aa20.64■□□□□ 0.89
SSSCA1-206ENST00000531405 COL4A3BPQ9Y5P4 624 aa20.64■□□□□ 0.89
SSSCA1-206ENST00000531405 WDR87Q6ZQQ6 2873 aa20.64■□□□□ 0.89
SSSCA1-206ENST00000531405 DMDP11532 3685 aa20.64■□□□□ 0.89
SSSCA1-206ENST00000531405 ZNF623O75123 536 aa20.63■□□□□ 0.89
SSSCA1-206ENST00000531405 MTHFRP42898 656 aa20.63■□□□□ 0.89
SSSCA1-206ENST00000531405 QARSP47897 775 aaKnown RBP20.63■□□□□ 0.89
SSSCA1-206ENST00000531405 RAB27AP51159 221 aa20.63■□□□□ 0.89
SSSCA1-206ENST00000531405 AFF1P51825 1210 aaKnown RBP20.63■□□□□ 0.89
SSSCA1-206ENST00000531405 POLGP54098 1239 aaPredicted RBP20.63■□□□□ 0.89
SSSCA1-206ENST00000531405 PPP2R5CQ13362 524 aa20.63■□□□□ 0.89
SSSCA1-206ENST00000531405 CPLX2Q6PUV4 134 aaKnown RBP20.63■□□□□ 0.89
SSSCA1-206ENST00000531405 SLC22A17Q8WUG5 538 aa20.63■□□□□ 0.89
SSSCA1-206ENST00000531405 RIPOR3Q96MK2 946 aa20.63■□□□□ 0.89
SSSCA1-206ENST00000531405 JPH2Q9BR39 696 aaPredicted RBP20.63■□□□□ 0.89
SSSCA1-206ENST00000531405 PHF20Q9BVI0 1012 aa20.63■□□□□ 0.89
SSSCA1-206ENST00000531405 MINDY3Q9H8M7 445 aa20.63■□□□□ 0.89
SSSCA1-206ENST00000531405 KCNMB3Q9NPA1 279 aa20.63■□□□□ 0.89
SSSCA1-206ENST00000531405 GJB4Q9NTQ9 266 aa20.63■□□□□ 0.89
SSSCA1-206ENST00000531405 SORCS3Q9UPU3 1222 aa20.63■□□□□ 0.89
SSSCA1-206ENST00000531405 MTCL1Q9Y4B5 1905 aaKnown RBP20.63■□□□□ 0.89
SSSCA1-206ENST00000531405 CCDC194A0A1B0GVG4 234 aa20.62■□□□□ 0.89
SSSCA1-206ENST00000531405 ASGR2P07307 311 aa20.62■□□□□ 0.89
SSSCA1-206ENST00000531405 SRGAP2CP0DJJ0 459 aa20.62■□□□□ 0.89
SSSCA1-206ENST00000531405 MTMR3Q13615 1198 aa20.62■□□□□ 0.89
SSSCA1-206ENST00000531405 AGMOQ6ZNB7 445 aa20.62■□□□□ 0.89
SSSCA1-206ENST00000531405 PRPF31Q8WWY3 499 aaKnown RBP20.62■□□□□ 0.89
SSSCA1-206ENST00000531405 SLC7A3Q8WY07 619 aa20.62■□□□□ 0.89
SSSCA1-206ENST00000531405 CEP170P1Q96L14 293 aa20.62■□□□□ 0.89
SSSCA1-206ENST00000531405 PDRG1Q9NUG6 133 aa20.62■□□□□ 0.89
SSSCA1-206ENST00000531405 DZANK1Q9NVP4 752 aa20.62■□□□□ 0.89
SSSCA1-206ENST00000531405 IRAK3Q9Y616 596 aa20.62■□□□□ 0.89
SSSCA1-206ENST00000531405 DDHD2O94830 711 aa20.61■□□□□ 0.89
SSSCA1-206ENST00000531405 SSBP05455 408 aaKnown RBP eCLIP20.61■□□□□ 0.89
SSSCA1-206ENST00000531405 SCRN1Q12765 414 aa20.61■□□□□ 0.89
SSSCA1-206ENST00000531405 PTPN14Q15678 1187 aa20.61■□□□□ 0.89
SSSCA1-206ENST00000531405 KIAA1841Q6NSI8 718 aa20.61■□□□□ 0.89
SSSCA1-206ENST00000531405 TMC5Q6UXY8 1006 aa20.61■□□□□ 0.89
SSSCA1-206ENST00000531405 NEK8Q86SG6 692 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms