RNA–Protein interactions for RNA: ENST00000531206.5

CDC27-207, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-207ENST00000531206 CLEC1BQ9P126 229 aa3.61□□□□□ -1.83
CDC27-207ENST00000531206 GPR34Q9UPC5 381 aa3.61□□□□□ -1.83
CDC27-207ENST00000531206 CGNL1Q0VF96 1302 aa3.61□□□□□ -1.83
CDC27-207ENST00000531206 SHISA3A0PJX4 238 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 TGM5O43548 720 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 KIF20AO95235 890 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 EDN3P14138 238 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 TACR1P25103 407 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 GPR3P46089 330 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 IREB2P48200 963 aaKnown RBP3.6□□□□□ -1.83
CDC27-207ENST00000531206 KLF1Q13351 362 aaPredicted RBP3.6□□□□□ -1.83
CDC27-207ENST00000531206 BTBD16Q32M84 506 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 CST9Q5W186 159 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 CAVIN1Q6NZI2 390 aaKnown RBP3.6□□□□□ -1.83
CDC27-207ENST00000531206 MTFR2Q6P444 385 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 PPARGC1BQ86YN6 1023 aaKnown RBP3.6□□□□□ -1.83
CDC27-207ENST00000531206 GPR161Q8N6U8 529 aaKnown RBP3.6□□□□□ -1.83
CDC27-207ENST00000531206 FAM13CQ8NE31 585 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 ARMC2Q8NEN0 867 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 OR2I1PQ8NGU4 316 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 AFG1LQ8WV93 481 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 RUBCNQ92622 972 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 HTRA1Q92743 480 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 ELF4Q99607 663 aaPredicted RBP3.6□□□□□ -1.83
CDC27-207ENST00000531206 TCP11L1Q9NUJ3 509 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 CGGBP1Q9UFW8 167 aaPredicted RBP3.6□□□□□ -1.83
CDC27-207ENST00000531206 AP4E1Q9UPM8 1137 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 MAPRE3Q9UPY8 281 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 ACEP12821 1306 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 UTRNP46939 3433 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 DDX60Q8IY21 1712 aaKnown RBP3.6□□□□□ -1.83
CDC27-207ENST00000531206 CACNA1SQ13698 1873 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 ARHGAP6O43182 974 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 DYNC1LI2O43237 492 aaPredicted RBP3.6□□□□□ -1.83
CDC27-207ENST00000531206 NDUFS2O75306 463 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 ADH1CP00326 375 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 AHSGP02765 367 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 NME1P15531 152 aaKnown RBP3.6□□□□□ -1.83
CDC27-207ENST00000531206 SDHBP21912 280 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 MAOBP27338 520 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 ATP6V1E1P36543 226 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 KCNJ1P48048 391 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 CNN3Q15417 329 aaKnown RBP3.6□□□□□ -1.83
CDC27-207ENST00000531206 TAF11Q15544 211 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 TBCCQ15814 346 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 TSTQ16762 297 aaKnown RBP3.6□□□□□ -1.83
CDC27-207ENST00000531206 INF2Q27J81 1249 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 RNF219Q5W0B1 726 aaPredicted RBP3.6□□□□□ -1.83
CDC27-207ENST00000531206 NXNQ6DKJ4 435 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 SAPCD2Q86UD0 394 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 ADGRG2Q8IZP9 1017 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 MIER2Q8N344 545 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 C17orf53Q8N3J3 647 aaPredicted RBP3.6□□□□□ -1.83
CDC27-207ENST00000531206 CEP120Q8N960 986 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 RAPGEF4Q8WZA2 1011 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 PAWRQ96IZ0 340 aaKnown RBP3.6□□□□□ -1.83
CDC27-207ENST00000531206 RNF38Q9H0F5 515 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 CCDC86Q9H6F5 360 aaKnown RBP3.6□□□□□ -1.83
CDC27-207ENST00000531206 IPPKQ9H8X2 491 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 CATSPERZQ9NTU4 200 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 CCNL1Q9UK58 526 aaPredicted RBP3.6□□□□□ -1.83
CDC27-207ENST00000531206 FBXL5Q9UKA1 691 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 TMCC3Q9ULS5 477 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 AKT3Q9Y243 479 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 CD163L1Q9NR16 1453 aa3.6□□□□□ -1.83
CDC27-207ENST00000531206 TRAV20A0A0B4J274 112 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 CCDC154A6NI56 674 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 CD3EP07766 207 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 KPNA1P52294 538 aaPredicted RBP3.59□□□□□ -1.83
CDC27-207ENST00000531206 JAM2P57087 298 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 KRT17Q04695 432 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 MPP2Q14168 576 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 KCNAB1Q14722 419 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 STARD3Q14849 445 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 VWA3BQ502W6 1294 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 GPR158Q5T848 1215 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 TRIM68Q6AZZ1 485 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 FAM117BQ6P1L5 589 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 USP49Q70CQ1 688 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 NLRP13Q86W25 1043 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 RHOT1Q8IXI2 618 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 LRRC47Q8N1G4 583 aaKnown RBP3.59□□□□□ -1.83
CDC27-207ENST00000531206 KCTD6Q8NC69 237 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 LILRB1Q8NHL6 650 aaPredicted RBP3.59□□□□□ -1.83
CDC27-207ENST00000531206 MCRS1Q96EZ8 462 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 ALG1Q9BT22 464 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 DHX36Q9H2U1 1008 aaKnown RBP3.59□□□□□ -1.83
CDC27-207ENST00000531206 BCAS3Q9H6U6 928 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 IL21RQ9HBE5 538 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 SACM1LQ9NTJ5 587 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 MRPS18AQ9NVS2 196 aaKnown RBP3.59□□□□□ -1.83
CDC27-207ENST00000531206 GFOD1Q9NXC2 390 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 KIF17Q9P2E2 1029 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 KCND3Q9UK17 655 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 FBXO2Q9UK22 296 aaPredicted RBP3.59□□□□□ -1.83
CDC27-207ENST00000531206 RNF112Q9ULX5 631 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 APOBEC2Q9Y235 224 aaKnown RBP3.59□□□□□ -1.83
CDC27-207ENST00000531206 PAXBP1Q9Y5B6 917 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 RGPD2P0DJD1 1756 aa3.59□□□□□ -1.83
CDC27-207ENST00000531206 KLHL33A6NCF5 533 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms