RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PTGDRQ13258 359 aa36.75■■■■□ 3.47
SSSCA1-205ENST00000527920 NFKBIZQ9BYH8 718 aa36.75■■■■□ 3.47
SSSCA1-205ENST00000527920 RAB34Q9BZG1 259 aa36.75■■■■□ 3.47
SSSCA1-205ENST00000527920 FAM105AQ9NUU6 356 aa36.75■■■■□ 3.47
SSSCA1-205ENST00000527920 H3BQV1 296 aa36.74■■■■□ 3.47
SSSCA1-205ENST00000527920 MCTP1Q6DN14 999 aa36.74■■■■□ 3.47
SSSCA1-205ENST00000527920 IGSF22Q8N9C0 903 aa36.74■■■■□ 3.47
SSSCA1-205ENST00000527920 COLGALT1Q8NBJ5 622 aa36.74■■■■□ 3.47
SSSCA1-205ENST00000527920 RNF169Q8NCN4 708 aa36.74■■■■□ 3.47
SSSCA1-205ENST00000527920 MCPH1Q8NEM0 835 aa36.74■■■■□ 3.47
SSSCA1-205ENST00000527920 ADAMTS19Q8TE59 1207 aa36.74■■■■□ 3.47
SSSCA1-205ENST00000527920 MRPL9Q9BYD2 267 aaKnown RBP36.74■■■■□ 3.47
SSSCA1-205ENST00000527920 EIF4ENIF1Q9NRA8 985 aaKnown RBP36.74■■■■□ 3.47
SSSCA1-205ENST00000527920 MYO7AQ13402 2215 aa36.74■■■■□ 3.47
SSSCA1-205ENST00000527920 KCNQ1P51787 676 aa36.73■■■■□ 3.47
SSSCA1-205ENST00000527920 POTEGQ6S5H5 508 aa36.73■■■■□ 3.47
SSSCA1-205ENST00000527920 PABPC5Q96DU9 382 aaKnown RBP36.73■■■■□ 3.47
SSSCA1-205ENST00000527920 LRWD1Q9UFC0 647 aa36.73■■■■□ 3.47
SSSCA1-205ENST00000527920 USO1O60763 962 aaKnown RBP36.72■■■■□ 3.47
SSSCA1-205ENST00000527920 NCOR1O75376 2440 aa36.72■■■■□ 3.47
SSSCA1-205ENST00000527920 HOXA11P31270 313 aaPredicted RBP36.72■■■■□ 3.47
SSSCA1-205ENST00000527920 CUL4AQ13619 759 aa36.72■■■■□ 3.47
SSSCA1-205ENST00000527920 LRRC55Q6ZSA7 311 aa36.72■■■■□ 3.47
SSSCA1-205ENST00000527920 ASAP3Q8TDY4 903 aa36.72■■■■□ 3.47
SSSCA1-205ENST00000527920 HCSTQ9UBK5 93 aa36.72■■■■□ 3.47
SSSCA1-205ENST00000527920 DNAJB1P25685 340 aa36.71■■■■□ 3.47
SSSCA1-205ENST00000527920 CAPSQ13938 189 aa36.71■■■■□ 3.47
SSSCA1-205ENST00000527920 POF1BQ8WVV4 589 aa36.71■■■■□ 3.47
SSSCA1-205ENST00000527920 PPP2R3CQ969Q6 453 aa36.71■■■■□ 3.47
SSSCA1-205ENST00000527920 A0A087WWV3 80 aa36.7■■■■□ 3.47
SSSCA1-205ENST00000527920 FGF18O76093 207 aa36.7■■■■□ 3.47
SSSCA1-205ENST00000527920 ERLIN2O94905 339 aa36.7■■■■□ 3.47
SSSCA1-205ENST00000527920 GLRA2P23416 452 aa36.7■■■■□ 3.47
SSSCA1-205ENST00000527920 AXLP30530 894 aa36.7■■■■□ 3.47
SSSCA1-205ENST00000527920 LEXMQ3ZCV2 418 aa36.7■■■■□ 3.47
SSSCA1-205ENST00000527920 HELQQ8TDG4 1101 aa36.7■■■■□ 3.47
SSSCA1-205ENST00000527920 CCDC51Q96ER9 411 aa36.7■■■■□ 3.47
SSSCA1-205ENST00000527920 POLR3FQ9H1D9 316 aaPredicted RBP36.7■■■■□ 3.47
SSSCA1-205ENST00000527920 LZTS1Q9Y250 596 aa36.7■■■■□ 3.47
SSSCA1-205ENST00000527920 PPM1AP35813 382 aa36.69■■■■□ 3.46
SSSCA1-205ENST00000527920 CCT6AP40227 531 aaKnown RBP36.69■■■■□ 3.46
SSSCA1-205ENST00000527920 PLCB3Q01970 1234 aa36.69■■■■□ 3.46
SSSCA1-205ENST00000527920 THNSL1Q8IYQ7 743 aa36.69■■■■□ 3.46
SSSCA1-205ENST00000527920 PGBD4Q96DM1 585 aa36.69■■■■□ 3.46
SSSCA1-205ENST00000527920 ZNF558Q96NG5 402 aa36.69■■■■□ 3.46
SSSCA1-205ENST00000527920 UHRF1Q96T88 793 aaPredicted RBP36.69■■■■□ 3.46
SSSCA1-205ENST00000527920 PCDHB2Q9Y5E7 798 aa36.69■■■■□ 3.46
SSSCA1-205ENST00000527920 CTC1Q2NKJ3 1217 aa36.68■■■■□ 3.46
SSSCA1-205ENST00000527920 LARP1BQ659C4 914 aaKnown RBP36.68■■■■□ 3.46
SSSCA1-205ENST00000527920 KCNT2Q6UVM3 1135 aa36.68■■■■□ 3.46
SSSCA1-205ENST00000527920 GLB1LQ6UWU2 654 aa36.68■■■■□ 3.46
SSSCA1-205ENST00000527920 MRPL10Q7Z7H8 261 aaKnown RBP36.68■■■■□ 3.46
SSSCA1-205ENST00000527920 ARHGEF35A5YM69 484 aa36.67■■■■□ 3.46
SSSCA1-205ENST00000527920 CARNS1A5YM72 827 aa36.67■■■■□ 3.46
SSSCA1-205ENST00000527920 TSPAN1O60635 241 aa36.67■■■■□ 3.46
SSSCA1-205ENST00000527920 KCNA5P22460 613 aa36.67■■■■□ 3.46
SSSCA1-205ENST00000527920 ATP2C1P98194 919 aaPredicted RBP36.67■■■■□ 3.46
SSSCA1-205ENST00000527920 MBTD1Q05BQ5 628 aa36.67■■■■□ 3.46
SSSCA1-205ENST00000527920 HYAL1Q12794 435 aa36.67■■■■□ 3.46
SSSCA1-205ENST00000527920 ATG2AQ2TAZ0 1938 aa36.67■■■■□ 3.46
SSSCA1-205ENST00000527920 CYP11B2P19099 503 aa36.66■■■■□ 3.46
SSSCA1-205ENST00000527920 NCBP1Q09161 790 aaKnown RBP36.66■■■■□ 3.46
SSSCA1-205ENST00000527920 UBXN11Q5T124 520 aa36.66■■■■□ 3.46
SSSCA1-205ENST00000527920 PDE12Q6L8Q7 609 aaKnown RBP36.66■■■■□ 3.46
SSSCA1-205ENST00000527920 PADI6Q6TGC4 694 aa36.66■■■■□ 3.46
SSSCA1-205ENST00000527920 DTHD1Q6ZMT9 781 aa36.66■■■■□ 3.46
SSSCA1-205ENST00000527920 MUC3AQ02505 3323 aa36.66■■■■□ 3.46
SSSCA1-205ENST00000527920 INO80B-WBP1J3KQ70 363 aa36.65■■■■□ 3.46
SSSCA1-205ENST00000527920 ECM1Q16610 540 aa36.65■■■■□ 3.46
SSSCA1-205ENST00000527920 AMHR2Q16671 573 aa36.65■■■■□ 3.46
SSSCA1-205ENST00000527920 NOTUMQ6P988 496 aa36.65■■■■□ 3.46
SSSCA1-205ENST00000527920 CNNM3Q8NE01 707 aa36.65■■■■□ 3.46
SSSCA1-205ENST00000527920 SNX29Q8TEQ0 813 aa36.65■■■■□ 3.46
SSSCA1-205ENST00000527920 GPRC5CQ9NQ84 441 aa36.65■■■■□ 3.46
SSSCA1-205ENST00000527920 TLR9Q9NR96 1032 aa36.65■■■■□ 3.46
SSSCA1-205ENST00000527920 CNTNAP2Q9UHC6 1331 aa36.64■■■■□ 3.46
SSSCA1-205ENST00000527920 IRS1P35568 1242 aa36.64■■■■□ 3.46
SSSCA1-205ENST00000527920 PUS10Q3MIT2 529 aaKnown RBP36.64■■■■□ 3.46
SSSCA1-205ENST00000527920 KRT79Q5XKE5 535 aa36.64■■■■□ 3.46
SSSCA1-205ENST00000527920 MRPS27Q92552 414 aaKnown RBP36.64■■■■□ 3.46
SSSCA1-205ENST00000527920 LPPQ93052 612 aa36.64■■■■□ 3.46
SSSCA1-205ENST00000527920 SPG21Q9NZD8 308 aa36.64■■■■□ 3.46
SSSCA1-205ENST00000527920 PUF60Q9UHX1 559 aaKnown RBP36.64■■■■□ 3.46
SSSCA1-205ENST00000527920 TNFRSF10AO00220 468 aa36.63■■■■□ 3.45
SSSCA1-205ENST00000527920 IL17AQ16552 155 aa36.63■■■■□ 3.45
SSSCA1-205ENST00000527920 NOMO2Q5JPE7 1267 aa36.63■■■■□ 3.45
SSSCA1-205ENST00000527920 CDCA2Q69YH5 1023 aaPredicted RBP36.63■■■■□ 3.45
SSSCA1-205ENST00000527920 KIAA1024Q9UPX6 916 aa36.63■■■■□ 3.45
SSSCA1-205ENST00000527920 OFD1O75665 1012 aa36.62■■■■□ 3.45
SSSCA1-205ENST00000527920 NCLP19338 710 aaKnown RBP36.62■■■■□ 3.45
SSSCA1-205ENST00000527920 ARL6IP4Q66PJ3 421 aaKnown RBP36.62■■■■□ 3.45
SSSCA1-205ENST00000527920 AGMOQ6ZNB7 445 aa36.62■■■■□ 3.45
SSSCA1-205ENST00000527920 BRAPQ7Z569 592 aa36.62■■■■□ 3.45
SSSCA1-205ENST00000527920 BHMT2Q9H2M3 363 aa36.62■■■■□ 3.45
SSSCA1-205ENST00000527920 DDX19AQ9NUU7 478 aaKnown RBP36.62■■■■□ 3.45
SSSCA1-205ENST00000527920 CLDND1Q9NY35 253 aa36.62■■■■□ 3.45
SSSCA1-205ENST00000527920 MEIS3P2A8K0S8 358 aa36.61■■■■□ 3.45
SSSCA1-205ENST00000527920 FSCN2O14926 492 aa36.61■■■■□ 3.45
SSSCA1-205ENST00000527920 PDCP20941 246 aa36.61■■■■□ 3.45
SSSCA1-205ENST00000527920 PPP4R3CPQ6ZMV5 832 aa36.61■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms