RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 DLL3Q9NYJ7 618 aa11.87□□□□□ -0.51
CPSF1-203ENST00000527916 WNT16Q9UBV4 365 aa11.87□□□□□ -0.51
CPSF1-203ENST00000527916 IRAK3Q9Y616 596 aa11.87□□□□□ -0.51
CPSF1-203ENST00000527916 R4GN57 208 aa11.87□□□□□ -0.51
CPSF1-203ENST00000527916 GPR179Q6PRD1 2367 aa11.87□□□□□ -0.51
CPSF1-203ENST00000527916 CFAP47Q6ZTR5 3102 aa11.86□□□□□ -0.51
CPSF1-203ENST00000527916 CPLX1O14810 134 aa11.86□□□□□ -0.51
CPSF1-203ENST00000527916 EDIL3O43854 480 aa11.86□□□□□ -0.51
CPSF1-203ENST00000527916 KRT37O76014 449 aa11.86□□□□□ -0.51
CPSF1-203ENST00000527916 NLRP5P59047 1200 aa11.86□□□□□ -0.51
CPSF1-203ENST00000527916 TBC1D8BQ0IIM8 1120 aa11.86□□□□□ -0.51
CPSF1-203ENST00000527916 KANK3Q6NY19 840 aa11.86□□□□□ -0.51
CPSF1-203ENST00000527916 GPR149Q86SP6 731 aa11.86□□□□□ -0.51
CPSF1-203ENST00000527916 CKAP2LQ8IYA6 745 aa11.86□□□□□ -0.51
CPSF1-203ENST00000527916 CNTNAP3BQ96NU0 1288 aa11.86□□□□□ -0.51
CPSF1-203ENST00000527916 MAP7D2Q96T17 732 aa11.86□□□□□ -0.51
CPSF1-203ENST00000527916 CNTNAP3Q9BZ76 1288 aa11.86□□□□□ -0.51
CPSF1-203ENST00000527916 ZBP1Q9H171 429 aa11.86□□□□□ -0.51
CPSF1-203ENST00000527916 VPS54Q9P1Q0 977 aa11.86□□□□□ -0.51
CPSF1-203ENST00000527916 MAFBQ9Y5Q3 323 aaPredicted RBP11.86□□□□□ -0.51
CPSF1-203ENST00000527916 CHD8Q9HCK8 2581 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 CACNA1IQ9P0X4 2223 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 NT5C1B-RDH14C9J2C7 533 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 M0R2N6 131 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 GPR32O75388 356 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 VTNP04004 478 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 CTSAP10619 480 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 TMOD1P28289 359 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 LETM2Q2VYF4 491 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 PRR16Q569H4 304 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 CLLU1OSQ5K130 101 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 SWSAP1Q6NVH7 229 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 C15orf39Q6ZRI6 1047 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 DDX53Q86TM3 631 aaKnown RBP11.85□□□□□ -0.51
CPSF1-203ENST00000527916 DAGLBQ8NCG7 672 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 HELQQ8TDG4 1101 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 SLC22A17Q8WUG5 538 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 AUTS2Q8WXX7 1259 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 BBXQ8WY36 941 aaPredicted RBP11.85□□□□□ -0.51
CPSF1-203ENST00000527916 LENG9Q96B70 501 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 RIT2Q99578 217 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 ZNF302Q9NR11 478 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 DACT1Q9NYF0 836 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 STK39Q9UEW8 545 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 PCDHA4Q9UN74 947 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 CEP131Q9UPN4 1083 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 PCDHA10Q9Y5I2 948 aa11.85□□□□□ -0.51
CPSF1-203ENST00000527916 CHD6Q8TD26 2715 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 CYP3A7-CYP3A51PA0A087WV96 503 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 A0A0U1RQF3 1178 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 DDX39AO00148 427 aaKnown RBP11.84□□□□□ -0.51
CPSF1-203ENST00000527916 MAGEB2O15479 319 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 ZC3H11AO75152 810 aaKnown RBP eCLIP11.84□□□□□ -0.51
CPSF1-203ENST00000527916 CDKL5O76039 1030 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 C22orf31O95567 290 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 PSAPP07602 524 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 CFHP08603 1231 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 ATP4AP20648 1035 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 EIF4BP23588 611 aaKnown RBP11.84□□□□□ -0.51
CPSF1-203ENST00000527916 CYP3A7P24462 503 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 NLRP11P59045 1033 aaKnown RBP11.84□□□□□ -0.51
CPSF1-203ENST00000527916 ANKRD1Q15327 319 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 RSPO4Q2I0M5 234 aaPredicted RBP11.84□□□□□ -0.51
CPSF1-203ENST00000527916 Q4G0T1 1027 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 ELMSAN1Q6PJG2 1045 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 CCDC60Q8IWA6 550 aaPredicted RBP11.84□□□□□ -0.51
CPSF1-203ENST00000527916 BLIDQ8IZY5 108 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 RIN2Q8WYP3 895 aaPredicted RBP11.84□□□□□ -0.51
CPSF1-203ENST00000527916 STAMQ92783 540 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 NXPE3Q969Y0 559 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 BORCS6Q96GS4 357 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 EMILIN2Q9BXX0 1053 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 TBC1D17Q9HA65 648 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 TCEAL9Q9UHQ7 104 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 AKT3Q9Y243 479 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 DENND4AQ7Z401 1863 aa11.84□□□□□ -0.51
CPSF1-203ENST00000527916 MAP1BP46821 2468 aaKnown RBP11.84□□□□□ -0.51
CPSF1-203ENST00000527916 FANCMQ8IYD8 2048 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 KRBA1A5PL33 1030 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 ZBTB42B2RXF5 422 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 MSH4O15457 936 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 PFKFB2O60825 505 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 SP9P0CG40 484 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 KLRC2P26717 231 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 SFNP31947 248 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 SCRN1Q12765 414 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 NPY5RQ15761 445 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 SPECC1Q5M775 1068 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 MOXD1Q6UVY6 613 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 ZNF598Q86UK7 904 aaKnown RBP11.83□□□□□ -0.52
CPSF1-203ENST00000527916 C1orf210Q8IVY1 113 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 GPR161Q8N6U8 529 aaKnown RBP11.83□□□□□ -0.52
CPSF1-203ENST00000527916 TBCKQ8TEA7 893 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 SLC5A5Q92911 643 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 IGSF21Q96ID5 467 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 SCLT1Q96NL6 688 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 LARP6Q9BRS8 491 aaKnown RBP11.83□□□□□ -0.52
CPSF1-203ENST00000527916 SLKQ9H2G2 1235 aaPredicted RBP11.83□□□□□ -0.52
CPSF1-203ENST00000527916 DPP7Q9UHL4 492 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 SIT1Q9Y3P8 196 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms