RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 XPNPEP1Q9NQW7 623 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 APEX2Q9UBZ4 518 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 DNAJC12Q9UKB3 198 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 N4BP1O75113 896 aaKnown RBP17.34■□□□□ 0.37
USH1C-204ENST00000526313 ADSSP30520 456 aa17.34■□□□□ 0.37
USH1C-204ENST00000526313 ALDH5A1P51649 535 aaPredicted RBP17.34■□□□□ 0.37
USH1C-204ENST00000526313 DLG4P78352 724 aa17.34■□□□□ 0.37
USH1C-204ENST00000526313 FSTL1Q12841 308 aa17.34■□□□□ 0.37
USH1C-204ENST00000526313 KIAA0753Q2KHM9 967 aa17.34■□□□□ 0.37
USH1C-204ENST00000526313 MIS18BP1Q6P0N0 1132 aa17.34■□□□□ 0.37
USH1C-204ENST00000526313 ERO1BQ86YB8 467 aa17.34■□□□□ 0.37
USH1C-204ENST00000526313 FMNL3Q8IVF7 1028 aa17.34■□□□□ 0.37
USH1C-204ENST00000526313 ANKRD35Q8N283 1001 aa17.34■□□□□ 0.37
USH1C-204ENST00000526313 RDH13Q8NBN7 331 aa17.34■□□□□ 0.37
USH1C-204ENST00000526313 SLC30A5Q8TAD4 765 aa17.34■□□□□ 0.37
USH1C-204ENST00000526313 MAFBQ9Y5Q3 323 aaPredicted RBP17.34■□□□□ 0.37
USH1C-204ENST00000526313 ZNF185O15231 689 aa17.33■□□□□ 0.37
USH1C-204ENST00000526313 PNMA6AP0CW24 399 aaPredicted RBP17.33■□□□□ 0.37
USH1C-204ENST00000526313 TCP1P17987 556 aaKnown RBP17.33■□□□□ 0.37
USH1C-204ENST00000526313 PPP3CAQ08209 521 aa17.33■□□□□ 0.37
USH1C-204ENST00000526313 EPC2Q52LR7 807 aa17.33■□□□□ 0.37
USH1C-204ENST00000526313 XKR3Q5GH77 459 aa17.33■□□□□ 0.37
USH1C-204ENST00000526313 PLEKHO2Q8TD55 490 aa17.33■□□□□ 0.37
USH1C-204ENST00000526313 FBXL18Q96ME1 805 aa17.33■□□□□ 0.37
USH1C-204ENST00000526313 OSBPL9Q96SU4 736 aa17.33■□□□□ 0.37
USH1C-204ENST00000526313 PACSIN1Q9BY11 444 aa17.33■□□□□ 0.37
USH1C-204ENST00000526313 SPATC1LQ9H0A9 340 aa17.33■□□□□ 0.37
USH1C-204ENST00000526313 CYP26B1Q9NR63 512 aa17.33■□□□□ 0.37
USH1C-204ENST00000526313 KCNH4Q9UQ05 1017 aa17.33■□□□□ 0.37
USH1C-204ENST00000526313 HYOU1Q9Y4L1 999 aa17.33■□□□□ 0.37
USH1C-204ENST00000526313 SYNGAP1Q96PV0 1343 aa17.33■□□□□ 0.37
USH1C-204ENST00000526313 IGKV6D-21A0A0A0MT36 114 aa17.33■□□□□ 0.36
USH1C-204ENST00000526313 SPDYE5A6NIY4 337 aa17.33■□□□□ 0.36
USH1C-204ENST00000526313 ANKRD63C9JTQ0 380 aa17.33■□□□□ 0.36
USH1C-204ENST00000526313 EVI5O60447 810 aa17.33■□□□□ 0.36
USH1C-204ENST00000526313 CNGA1P29973 690 aa17.33■□□□□ 0.36
USH1C-204ENST00000526313 CBX1P83916 185 aa17.33■□□□□ 0.36
USH1C-204ENST00000526313 PRKCEQ02156 737 aa17.33■□□□□ 0.36
USH1C-204ENST00000526313 DRAP1Q14919 205 aaPredicted RBP17.33■□□□□ 0.36
USH1C-204ENST00000526313 ENOX2Q16206 610 aaKnown RBP17.33■□□□□ 0.36
USH1C-204ENST00000526313 PHLDB3Q6NSJ2 640 aa17.33■□□□□ 0.36
USH1C-204ENST00000526313 ALKBH5Q6P6C2 394 aaKnown RBP17.33■□□□□ 0.36
USH1C-204ENST00000526313 ZSWIM2Q8NEG5 633 aa17.33■□□□□ 0.36
USH1C-204ENST00000526313 ARFGAP3Q9NP61 516 aa17.33■□□□□ 0.36
USH1C-204ENST00000526313 KMT5AQ9NQR1 393 aa17.33■□□□□ 0.36
USH1C-204ENST00000526313 TSKSQ9UJT2 592 aa17.33■□□□□ 0.36
USH1C-204ENST00000526313 INTUQ9ULD6 942 aa17.33■□□□□ 0.36
USH1C-204ENST00000526313 EMSYQ7Z589 1322 aa17.33■□□□□ 0.36
USH1C-204ENST00000526313 SOWAHBA6NEL2 793 aa17.32■□□□□ 0.36
USH1C-204ENST00000526313 DDX3XO00571 662 aaKnown RBP eCLIP17.32■□□□□ 0.36
USH1C-204ENST00000526313 BUB1O43683 1085 aa17.32■□□□□ 0.36
USH1C-204ENST00000526313 CNMDO75829 334 aa17.32■□□□□ 0.36
USH1C-204ENST00000526313 TBC1D8O95759 1140 aa17.32■□□□□ 0.36
USH1C-204ENST00000526313 ATP4AP20648 1035 aa17.32■□□□□ 0.36
USH1C-204ENST00000526313 ENPEPQ07075 957 aa17.32■□□□□ 0.36
USH1C-204ENST00000526313 WDR93Q6P2C0 686 aa17.32■□□□□ 0.36
USH1C-204ENST00000526313 ANKRD13AQ8IZ07 590 aa17.32■□□□□ 0.36
USH1C-204ENST00000526313 ZC3H15Q8WU90 426 aaKnown RBP17.32■□□□□ 0.36
USH1C-204ENST00000526313 VTI1AQ96AJ9 217 aa17.32■□□□□ 0.36
USH1C-204ENST00000526313 L3MBTL3Q96JM7 780 aaPredicted RBP17.32■□□□□ 0.36
USH1C-204ENST00000526313 DENND3A2RUS2 1198 aa17.32■□□□□ 0.36
USH1C-204ENST00000526313 CCDC169A6NNP5 214 aa17.32■□□□□ 0.36
USH1C-204ENST00000526313 PEX10O60683 326 aa17.32■□□□□ 0.36
USH1C-204ENST00000526313 SEC31AO94979 1220 aaKnown RBP17.32■□□□□ 0.36
USH1C-204ENST00000526313 SLC39A4Q6P5W5 647 aa17.32■□□□□ 0.36
USH1C-204ENST00000526313 TRMT1LQ7Z2T5 733 aaKnown RBP17.32■□□□□ 0.36
USH1C-204ENST00000526313 VPS36Q86VN1 386 aa17.32■□□□□ 0.36
USH1C-204ENST00000526313 COG1Q8WTW3 980 aa17.32■□□□□ 0.36
USH1C-204ENST00000526313 CAPZA3Q96KX2 299 aa17.32■□□□□ 0.36
USH1C-204ENST00000526313 ELP3Q9H9T3 547 aa17.32■□□□□ 0.36
USH1C-204ENST00000526313 MYH9P35579 1960 aaKnown RBP17.31■□□□□ 0.36
USH1C-204ENST00000526313 ADRB2P07550 413 aa17.31■□□□□ 0.36
USH1C-204ENST00000526313 MOGSQ13724 837 aa17.31■□□□□ 0.36
USH1C-204ENST00000526313 GADL1Q6ZQY3 521 aa17.31■□□□□ 0.36
USH1C-204ENST00000526313 USP50Q70EL3 339 aaPredicted RBP17.31■□□□□ 0.36
USH1C-204ENST00000526313 CYFIP1Q7L576 1253 aa17.31■□□□□ 0.36
USH1C-204ENST00000526313 KRT222Q8N1A0 295 aa17.31■□□□□ 0.36
USH1C-204ENST00000526313 CEP89Q96ST8 783 aa17.31■□□□□ 0.36
USH1C-204ENST00000526313 SYT17Q9BSW7 474 aa17.31■□□□□ 0.36
USH1C-204ENST00000526313 KIFC3Q9BVG8 833 aa17.31■□□□□ 0.36
USH1C-204ENST00000526313 ATP6V0A4Q9HBG4 840 aa17.31■□□□□ 0.36
USH1C-204ENST00000526313 ARHGAP28Q9P2N2 729 aa17.31■□□□□ 0.36
USH1C-204ENST00000526313 SEPT9Q9UHD8 586 aaPredicted RBP17.31■□□□□ 0.36
USH1C-204ENST00000526313 KCNG1Q9UIX4 513 aa17.31■□□□□ 0.36
USH1C-204ENST00000526313 ADGRA3Q8IWK6 1321 aa17.31■□□□□ 0.36
USH1C-204ENST00000526313 A0A0A6YYK5 440 aaPredicted RBP17.3■□□□□ 0.36
USH1C-204ENST00000526313 TARSL2A2RTX5 802 aaKnown RBP17.3■□□□□ 0.36
USH1C-204ENST00000526313 PALMO75781 387 aa17.3■□□□□ 0.36
USH1C-204ENST00000526313 RHOXF2BP0C7M4 288 aa17.3■□□□□ 0.36
USH1C-204ENST00000526313 YBX3P16989 372 aaKnown RBP eCLIP17.3■□□□□ 0.36
USH1C-204ENST00000526313 ABCD1P33897 745 aa17.3■□□□□ 0.36
USH1C-204ENST00000526313 SOX10P56693 466 aa17.3■□□□□ 0.36
USH1C-204ENST00000526313 CETN1Q12798 172 aa17.3■□□□□ 0.36
USH1C-204ENST00000526313 PPIL2Q13356 520 aa17.3■□□□□ 0.36
USH1C-204ENST00000526313 KIF22Q14807 665 aa17.3■□□□□ 0.36
USH1C-204ENST00000526313 BEND6Q5SZJ8 279 aaPredicted RBP17.3■□□□□ 0.36
USH1C-204ENST00000526313 MEI1Q5TIA1 1274 aa17.3■□□□□ 0.36
USH1C-204ENST00000526313 C9orf131Q5VYM1 1079 aa17.3■□□□□ 0.36
USH1C-204ENST00000526313 NFRKBQ6P4R8 1299 aa17.3■□□□□ 0.36
USH1C-204ENST00000526313 ZNF526Q8TF50 670 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms