RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 CD207Q9UJ71 328 aa13.46□□□□□ -0.25
SSBP3-210ENST00000525990 INPP5FQ9Y2H2 1132 aa13.46□□□□□ -0.25
SSBP3-210ENST00000525990 PLXNA3P51805 1871 aa13.46□□□□□ -0.26
SSBP3-210ENST00000525990 HOXA2O43364 376 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 DKC1O60832 514 aaKnown RBP eCLIP13.45□□□□□ -0.26
SSBP3-210ENST00000525990 EOMESO95936 686 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 SPATA31C1P0DKV0 1188 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 HOXA11P31270 313 aaPredicted RBP13.45□□□□□ -0.26
SSBP3-210ENST00000525990 RFC5P40937 340 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 PLCB3Q01970 1234 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 UBE3AQ05086 875 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 SMAD4Q13485 552 aaKnown RBP13.45□□□□□ -0.26
SSBP3-210ENST00000525990 SMAD2Q15796 467 aaKnown RBP13.45□□□□□ -0.26
SSBP3-210ENST00000525990 PUS10Q3MIT2 529 aaKnown RBP13.45□□□□□ -0.26
SSBP3-210ENST00000525990 UBXN11Q5T124 520 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 AGMOQ6ZNB7 445 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 FAM43BQ6ZT52 329 aaPredicted RBP13.45□□□□□ -0.26
SSBP3-210ENST00000525990 SLC39A11Q8N1S5 342 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 C8orf76Q96K31 380 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 MTRQ99707 1265 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 TCF25Q9BQ70 676 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 JPH2Q9BR39 696 aaPredicted RBP13.45□□□□□ -0.26
SSBP3-210ENST00000525990 LRFN3Q9BTN0 628 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 GBP3Q9H0R5 595 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 TLE6Q9H808 572 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 ENTPD7Q9NQZ7 604 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 CHST12Q9NRB3 414 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 TBC1D13Q9NVG8 400 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 DNAJB4Q9UDY4 337 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 CDH22Q9UJ99 828 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 C2orf16Q68DN1 1984 aa13.45□□□□□ -0.26
SSBP3-210ENST00000525990 C19orf67A6NJJ6 358 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 PI4K2BG5E9Z4 385 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 NCK2O43639 380 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 ZC3H11AO75152 810 aaKnown RBP eCLIP13.44□□□□□ -0.26
SSBP3-210ENST00000525990 MED24O75448 989 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 CD2BP2O95400 341 aaKnown RBP13.44□□□□□ -0.26
SSBP3-210ENST00000525990 RARRES1P49788 294 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 BCAR1P56945 870 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 CDC42EP1Q00587 391 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 CAPSQ13938 189 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 KCNC3Q14003 757 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 ZNF174Q15697 407 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 DUSP6Q16828 381 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 LLGL2Q6P1M3 1020 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 MAEAQ7L5Y9 396 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 OTUD6AQ7L8S5 288 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 ADHFE1Q8IWW8 467 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 SMRP1Q8NCR6 262 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 AUTS2Q8WXX7 1259 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 CPB2Q96IY4 423 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 TRAIPQ9BWF2 469 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 APOL5Q9BWW9 433 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 EIF2AQ9BY44 585 aaKnown RBP13.44□□□□□ -0.26
SSBP3-210ENST00000525990 INO80BQ9C086 356 aaPredicted RBP13.44□□□□□ -0.26
SSBP3-210ENST00000525990 NRDE2Q9H7Z3 1164 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 GPRC5CQ9NQ84 441 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 SPG21Q9NZD8 308 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 PCDHB2Q9Y5E7 798 aa13.44□□□□□ -0.26
SSBP3-210ENST00000525990 TRIP11Q15643 1979 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 TSPAN1O60635 241 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 USO1O60763 962 aaKnown RBP13.43□□□□□ -0.26
SSBP3-210ENST00000525990 OFD1O75665 1012 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 LYPLA2O95372 231 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 GLRA2P23416 452 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 TECP42680 631 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 CSPP1Q1MSJ5 1256 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 POTEGQ6S5H5 508 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 SRGAP1Q7Z6B7 1085 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 CDR2LQ86X02 465 aaPredicted RBP13.43□□□□□ -0.26
SSBP3-210ENST00000525990 CATSPER3Q86XQ3 398 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 ZNF280BQ86YH2 543 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 FBXO18Q8NFZ0 1043 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 FEZF2Q8TBJ5 459 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 TCP11Q8WWU5 503 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 PPP2R3CQ969Q6 453 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 LLPHQ9BRT6 129 aaKnown RBP13.43□□□□□ -0.26
SSBP3-210ENST00000525990 VN1R3Q9BXE9 311 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 C1QTNF1Q9BXJ1 281 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 RNF39Q9H2S5 420 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 LZTS1Q9Y250 596 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 USP15Q9Y4E8 981 aaPredicted RBP13.43□□□□□ -0.26
SSBP3-210ENST00000525990 HES2Q9Y543 173 aa13.43□□□□□ -0.26
SSBP3-210ENST00000525990 DENND4AQ7Z401 1863 aa13.42□□□□□ -0.26
SSBP3-210ENST00000525990 B4GALT5O43286 388 aa13.42□□□□□ -0.26
SSBP3-210ENST00000525990 ZNF623O75123 536 aa13.42□□□□□ -0.26
SSBP3-210ENST00000525990 DDHD2O94830 711 aa13.42□□□□□ -0.26
SSBP3-210ENST00000525990 EYA4O95677 639 aa13.42□□□□□ -0.26
SSBP3-210ENST00000525990 ARL2P36404 184 aa13.42□□□□□ -0.26
SSBP3-210ENST00000525990 PTENP60484 403 aa13.42□□□□□ -0.26
SSBP3-210ENST00000525990 MBTD1Q05BQ5 628 aa13.42□□□□□ -0.26
SSBP3-210ENST00000525990 COASYQ13057 564 aa13.42□□□□□ -0.26
SSBP3-210ENST00000525990 SAFBQ15424 915 aaKnown RBP eCLIP13.42□□□□□ -0.26
SSBP3-210ENST00000525990 ECM1Q16610 540 aa13.42□□□□□ -0.26
SSBP3-210ENST00000525990 AMHR2Q16671 573 aa13.42□□□□□ -0.26
SSBP3-210ENST00000525990 NOMO2Q5JPE7 1267 aa13.42□□□□□ -0.26
SSBP3-210ENST00000525990 TTC38Q5R3I4 469 aa13.42□□□□□ -0.26
SSBP3-210ENST00000525990 GLB1LQ6UWU2 654 aa13.42□□□□□ -0.26
SSBP3-210ENST00000525990 TMC7Q7Z402 723 aa13.42□□□□□ -0.26
SSBP3-210ENST00000525990 SMG8Q8ND04 991 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms