RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 PDRG1Q9NUG6 133 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 FAM105AQ9NUU6 356 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 TBC1D13Q9NVG8 400 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 VAV3Q9UKW4 847 aa13.16□□□□□ -0.3
NDUFS3-204ENST00000525378 WDFY4Q6ZS81 3184 aa13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 B4GALT3O60512 393 aa13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 OFD1O75665 1012 aa13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 CXCL14O95715 111 aa13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 GALTP07902 379 aa13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 QARSP47897 775 aaKnown RBP13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 KANK3Q6NY19 840 aa13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 FAM177A1Q8N128 213 aaPredicted RBP13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 VPS52Q8N1B4 723 aa13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 FEZF2Q8TBJ5 459 aa13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 OXER1Q8TDS5 423 aa13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 HAS1Q92839 578 aa13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 TMEM169Q96HH4 297 aa13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 POMKQ9H5K3 350 aa13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 BMP2KQ9NSY1 1161 aaPredicted RBP13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 DNAJB4Q9UDY4 337 aa13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 INPP5FQ9Y2H2 1132 aa13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 TRIOO75962 3097 aa13.15□□□□□ -0.3
NDUFS3-204ENST00000525378 PLXNA3P51805 1871 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 CCDC194A0A1B0GVG4 234 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 CCNT1O60563 726 aaKnown RBP13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 ZNF623O75123 536 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 WEE2P0C1S8 567 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 SKIP12755 728 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 PTPN21Q16825 1174 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 TPRNQ4KMQ1 711 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 NOMO2Q5JPE7 1267 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 EARS2Q5JPH6 523 aaKnown RBP13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 PPP4R3AQ6IN85 833 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 AGMOQ6ZNB7 445 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 NEK8Q86SG6 692 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 ZNF280BQ86YH2 543 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 POTEDQ86YR6 584 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 FBXL6Q8N531 539 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 C12orf76Q8N812 135 aaPredicted RBP13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 TMEM143Q96AN5 459 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 IGSF21Q96ID5 467 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 CEP170P1Q96L14 293 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 FAM20AQ96MK3 541 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 JPH2Q9BR39 696 aaPredicted RBP13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 VN1R3Q9BXE9 311 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 GBP3Q9H0R5 595 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 SLKQ9H2G2 1235 aaPredicted RBP13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 ADAM7Q9H2U9 754 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 DHX33Q9H6R0 707 aaKnown RBP13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 MINDY3Q9H8M7 445 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 AGPAT5Q9NUQ2 364 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 COL4A3BPQ9Y5P4 624 aa13.14□□□□□ -0.31
NDUFS3-204ENST00000525378 STK36Q9NRP7 1315 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 FAM205CA6NFA0 338 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 C2CD4DB7Z1M9 353 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 ZBTB39O15060 712 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 DDHD2O94830 711 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 CTDNEP1O95476 244 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 P4HBP07237 508 aaKnown RBP13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 CTSAP10619 480 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 EPCAMP16422 314 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 SLC11A1P49279 550 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 RAB27AP51159 221 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 AFF1P51825 1210 aaKnown RBP13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 POLGP54098 1239 aaPredicted RBP13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 VCPP55072 806 aaKnown RBP13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 ITIH3Q06033 890 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 TCF15Q12870 199 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 RARS2Q5T160 578 aaKnown RBP13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 GLB1LQ6UWU2 654 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 PIK3AP1Q6ZUJ8 805 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 DDX53Q86TM3 631 aaKnown RBP13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 SUGP1Q8IWZ8 645 aaKnown RBP13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 LXNQ9BS40 222 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 TSHZ2Q9NRE2 1034 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 RGL1Q9NZL6 768 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 TPCN1Q9ULQ1 816 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 PCDHB2Q9Y5E7 798 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 IRAK3Q9Y616 596 aa13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 MTCL1Q9Y4B5 1905 aaKnown RBP13.13□□□□□ -0.31
NDUFS3-204ENST00000525378 PFKFB2O60825 505 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 DKC1O60832 514 aaKnown RBP eCLIP13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 CDKL5O76039 1030 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 PDGFBP01127 241 aaPredicted RBP13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 SRGAP2CP0DJJ0 459 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 GCFC2P16383 781 aaKnown RBP13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 HOXA11P31270 313 aaPredicted RBP13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 RNASELQ05823 741 aaKnown RBP13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 SPIRE1Q08AE8 756 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 LAMTOR4Q0VGL1 99 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 CTTNQ14247 550 aaKnown RBP13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 BMS1Q14692 1282 aaKnown RBP13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 EPHA7Q15375 998 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 UBXN11Q5T124 520 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 NCAPH2Q6IBW4 605 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 CES5AQ6NT32 575 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 SRGAP1Q7Z6B7 1085 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 MRPL10Q7Z7H8 261 aaKnown RBP13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 ZBTB33Q86T24 672 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms