RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PRAMEF19Q5SWL8 479 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 WDR78Q5VTH9 848 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 ARMCX6Q7L4S7 300 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 SPRED2Q7Z698 418 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 DPP9Q86TI2 863 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 SHKBP1Q8TBC3 707 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 BAHD1Q8TBE0 780 aaPredicted RBP8.63□□□□□ -1.03
NEDD8-203ENST00000524927 DHRS1Q96LJ7 313 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 RIPOR3Q96MK2 946 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 BABAM1Q9NWV8 329 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 HYPKQ9NX55 129 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 PCDHB10Q9UN67 800 aa8.63□□□□□ -1.03
NEDD8-203ENST00000524927 DOCK2Q92608 1830 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 A0A0U1RQG5 324 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-203ENST00000524927 B2RBV5 119 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 PDPK1O15530 556 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 MBTPS2O43462 519 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 BMP3P12645 472 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 ACTN1P12814 892 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 CCNFP41002 786 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 ERVK-21P61565 698 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 CBX2Q14781 532 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-203ENST00000524927 GNPTABQ3T906 1256 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 SGO2Q562F6 1265 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 CDC42EP5Q6NZY7 148 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 FAM20CQ8IXL6 584 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 SHISA5Q8N114 240 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 MFSD2AQ8NA29 543 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 CYB5D2Q8WUJ1 264 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 RUBCNQ92622 972 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 VWCEQ96DN2 955 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 MYD88Q99836 296 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 HAUS7Q99871 368 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 AS3MTQ9HBK9 375 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 SLC5A4Q9NY91 659 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 TMOD4Q9NZQ9 345 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 MSRB2Q9Y3D2 182 aa8.62□□□□□ -1.03
NEDD8-203ENST00000524927 LOC730098B7Z3J9 87 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 STRNO43815 780 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 ENTPD3O75355 529 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 CCL23P55773 120 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 BACE1P56817 501 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 SLC7A5Q01650 507 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 SMAD4Q13485 552 aaKnown RBP8.61□□□□□ -1.03
NEDD8-203ENST00000524927 MAP7Q14244 749 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 NCAPHQ15003 741 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 PTPROQ16827 1216 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 UVSSAQ2YD98 709 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 CCSAPQ6IQ19 270 aaPredicted RBP8.61□□□□□ -1.03
NEDD8-203ENST00000524927 TMEM105Q8N8V8 129 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 KLHDC9Q8NEP7 349 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 MRPL38Q96DV4 380 aaKnown RBP8.61□□□□□ -1.03
NEDD8-203ENST00000524927 SLC6A18Q96N87 628 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 TGS1Q96RS0 853 aaKnown RBP8.61□□□□□ -1.03
NEDD8-203ENST00000524927 DBNDD2Q9BQY9 259 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 OSBPL5Q9H0X9 879 aaPredicted RBP8.61□□□□□ -1.03
NEDD8-203ENST00000524927 WNT8AQ9H1J5 351 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 KCNF1Q9H3M0 494 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 SEMA6CQ9H3T2 930 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 ADGRE2Q9UHX3 823 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 NUDCQ9Y266 331 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 CEP295Q9C0D2 2601 aa8.61□□□□□ -1.03
NEDD8-203ENST00000524927 UMODL1Q5DID0 1318 aa8.6□□□□□ -1.03
NEDD8-203ENST00000524927 ZNF236Q9UL36 1845 aa8.6□□□□□ -1.03
NEDD8-203ENST00000524927 CYSRT1A8MQ03 144 aa8.6□□□□□ -1.03
NEDD8-203ENST00000524927 PDGFBP01127 241 aaPredicted RBP8.6□□□□□ -1.03
NEDD8-203ENST00000524927 LTBRP36941 435 aa8.6□□□□□ -1.03
NEDD8-203ENST00000524927 NFKBIBQ15653 356 aa8.6□□□□□ -1.03
NEDD8-203ENST00000524927 KCNA10Q16322 511 aa8.6□□□□□ -1.03
NEDD8-203ENST00000524927 KIAA1211LQ6NV74 962 aa8.6□□□□□ -1.03
NEDD8-203ENST00000524927 LRSAM1Q6UWE0 723 aa8.6□□□□□ -1.03
NEDD8-203ENST00000524927 EP400NLQ6ZTU2 488 aa8.6□□□□□ -1.03
NEDD8-203ENST00000524927 FAM84BQ96KN1 310 aaPredicted RBP8.6□□□□□ -1.03
NEDD8-203ENST00000524927 DNAJC7Q99615 494 aa8.6□□□□□ -1.03
NEDD8-203ENST00000524927 FAM83CQ9BQN1 747 aa8.6□□□□□ -1.03
NEDD8-203ENST00000524927 RTKNQ9BST9 563 aa8.6□□□□□ -1.03
NEDD8-203ENST00000524927 CLDND1Q9NY35 253 aa8.6□□□□□ -1.03
NEDD8-203ENST00000524927 SMCHD1A6NHR9 2005 aa8.59□□□□□ -1.03
NEDD8-203ENST00000524927 FAM95CA0A1B0GW59 222 aa8.59□□□□□ -1.03
NEDD8-203ENST00000524927 C19orf81C9J6K1 198 aa8.59□□□□□ -1.03
NEDD8-203ENST00000524927 CLEC3AO75596 197 aa8.59□□□□□ -1.03
NEDD8-203ENST00000524927 CNMDO75829 334 aa8.59□□□□□ -1.03
NEDD8-203ENST00000524927 UBOX5O94941 541 aa8.59□□□□□ -1.03
NEDD8-203ENST00000524927 AKR1A1P14550 325 aa8.59□□□□□ -1.03
NEDD8-203ENST00000524927 MAP4P27816 1152 aaKnown RBP8.59□□□□□ -1.03
NEDD8-203ENST00000524927 CST5P28325 142 aaPredicted RBP8.59□□□□□ -1.03
NEDD8-203ENST00000524927 ADORA2AP29274 412 aa8.59□□□□□ -1.03
NEDD8-203ENST00000524927 GYG1P46976 350 aa8.59□□□□□ -1.03
NEDD8-203ENST00000524927 RASGRF1Q13972 1273 aa8.59□□□□□ -1.03
NEDD8-203ENST00000524927 BBS9Q3SYG4 887 aa8.59□□□□□ -1.03
NEDD8-203ENST00000524927 MTERF2Q49AM1 385 aa8.59□□□□□ -1.03
NEDD8-203ENST00000524927 CLEC10AQ8IUN9 316 aa8.59□□□□□ -1.03
NEDD8-203ENST00000524927 TMEM192Q8IY95 271 aa8.59□□□□□ -1.03
NEDD8-203ENST00000524927 PCSK9Q8NBP7 692 aaKnown RBP8.59□□□□□ -1.03
NEDD8-203ENST00000524927 MIPEPQ99797 713 aa8.59□□□□□ -1.03
NEDD8-203ENST00000524927 IDI2Q9BXS1 227 aa8.59□□□□□ -1.03
NEDD8-203ENST00000524927 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.59□□□□□ -1.03
NEDD8-203ENST00000524927 ZNF214Q9UL59 606 aaPredicted RBP8.59□□□□□ -1.03
NEDD8-203ENST00000524927 RFX7Q2KHR2 1363 aa8.59□□□□□ -1.03
NEDD8-203ENST00000524927 LCHNA4D1U4 455 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms