RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 XPNPEP1Q9NQW7 623 aa19.19■□□□□ 0.66
CCNC-213ENST00000523541 AGPAT5Q9NUQ2 364 aa19.19■□□□□ 0.66
CCNC-213ENST00000523541 LRWD1Q9UFC0 647 aa19.19■□□□□ 0.66
CCNC-213ENST00000523541 H3BQ06 376 aaPredicted RBP19.18■□□□□ 0.66
CCNC-213ENST00000523541 CD2BP2O95400 341 aaKnown RBP19.18■□□□□ 0.66
CCNC-213ENST00000523541 PTENP60484 403 aa19.18■□□□□ 0.66
CCNC-213ENST00000523541 PTGDRQ13258 359 aa19.18■□□□□ 0.66
CCNC-213ENST00000523541 PUS10Q3MIT2 529 aaKnown RBP19.18■□□□□ 0.66
CCNC-213ENST00000523541 TWF2Q6IBS0 349 aaKnown RBP19.18■□□□□ 0.66
CCNC-213ENST00000523541 THNSL1Q8IYQ7 743 aa19.18■□□□□ 0.66
CCNC-213ENST00000523541 LRRC43Q8N309 656 aa19.18■□□□□ 0.66
CCNC-213ENST00000523541 IGSF22Q8N9C0 903 aa19.18■□□□□ 0.66
CCNC-213ENST00000523541 RNF149Q8NC42 400 aa19.18■□□□□ 0.66
CCNC-213ENST00000523541 CNNM3Q8NE01 707 aa19.18■□□□□ 0.66
CCNC-213ENST00000523541 MICAL1Q8TDZ2 1067 aa19.18■□□□□ 0.66
CCNC-213ENST00000523541 PIGOQ8TEQ8 1089 aa19.18■□□□□ 0.66
CCNC-213ENST00000523541 PGBD4Q96DM1 585 aa19.18■□□□□ 0.66
CCNC-213ENST00000523541 PABPC5Q96DU9 382 aaKnown RBP19.18■□□□□ 0.66
CCNC-213ENST00000523541 PIN4Q9Y237 131 aaKnown RBP19.18■□□□□ 0.66
CCNC-213ENST00000523541 LZTS1Q9Y250 596 aa19.18■□□□□ 0.66
CCNC-213ENST00000523541 FSD2A1L4K1 749 aa19.17■□□□□ 0.66
CCNC-213ENST00000523541 MED24O75448 989 aa19.17■□□□□ 0.66
CCNC-213ENST00000523541 ITGB1P05556 798 aa19.17■□□□□ 0.66
CCNC-213ENST00000523541 PPM1AP35813 382 aa19.17■□□□□ 0.66
CCNC-213ENST00000523541 PLCB3Q01970 1234 aa19.17■□□□□ 0.66
CCNC-213ENST00000523541 LARP1BQ659C4 914 aaKnown RBP19.17■□□□□ 0.66
CCNC-213ENST00000523541 MCTP1Q6DN14 999 aa19.17■□□□□ 0.66
CCNC-213ENST00000523541 CCDC51Q96ER9 411 aa19.17■□□□□ 0.66
CCNC-213ENST00000523541 CWH43Q9H720 699 aa19.17■□□□□ 0.66
CCNC-213ENST00000523541 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.17■□□□□ 0.66
CCNC-213ENST00000523541 FAM105AQ9NUU6 356 aa19.17■□□□□ 0.66
CCNC-213ENST00000523541 PUF60Q9UHX1 559 aaKnown RBP19.17■□□□□ 0.66
CCNC-213ENST00000523541 TTC28Q96AY4 2481 aa19.17■□□□□ 0.66
CCNC-213ENST00000523541 CUL4AQ13619 759 aa19.16■□□□□ 0.66
CCNC-213ENST00000523541 LEXMQ3ZCV2 418 aa19.16■□□□□ 0.66
CCNC-213ENST00000523541 PTCRAQ6ISU1 281 aaPredicted RBP19.16■□□□□ 0.66
CCNC-213ENST00000523541 DTHD1Q6ZMT9 781 aa19.16■□□□□ 0.66
CCNC-213ENST00000523541 MRPL10Q7Z7H8 261 aaKnown RBP19.16■□□□□ 0.66
CCNC-213ENST00000523541 POF1BQ8WVV4 589 aa19.16■□□□□ 0.66
CCNC-213ENST00000523541 UBN1Q9NPG3 1134 aa19.16■□□□□ 0.66
CCNC-213ENST00000523541 RNF19AQ9NV58 838 aa19.16■□□□□ 0.66
CCNC-213ENST00000523541 FAM50BQ9Y247 325 aa19.16■□□□□ 0.66
CCNC-213ENST00000523541 PCDHB6Q9Y5E3 794 aa19.16■□□□□ 0.66
CCNC-213ENST00000523541 KIAA1671Q9BY89 1806 aa19.16■□□□□ 0.66
CCNC-213ENST00000523541 ERLIN2O94905 339 aa19.15■□□□□ 0.66
CCNC-213ENST00000523541 ATF7P17544 494 aaPredicted RBP19.15■□□□□ 0.66
CCNC-213ENST00000523541 PDCP20941 246 aa19.15■□□□□ 0.66
CCNC-213ENST00000523541 HOXA11P31270 313 aaPredicted RBP19.15■□□□□ 0.66
CCNC-213ENST00000523541 KRT17Q04695 432 aa19.15■□□□□ 0.66
CCNC-213ENST00000523541 CAMK1Q14012 370 aa19.15■□□□□ 0.66
CCNC-213ENST00000523541 GLB1LQ6UWU2 654 aa19.15■□□□□ 0.66
CCNC-213ENST00000523541 COLGALT1Q8NBJ5 622 aa19.15■□□□□ 0.66
CCNC-213ENST00000523541 MINDY3Q9H8M7 445 aa19.15■□□□□ 0.66
CCNC-213ENST00000523541 MUC3AQ02505 3323 aa19.14■□□□□ 0.65
CCNC-213ENST00000523541 FGF18O76093 207 aa19.14■□□□□ 0.65
CCNC-213ENST00000523541 CYP11B2P19099 503 aa19.14■□□□□ 0.65
CCNC-213ENST00000523541 CCT6AP40227 531 aaKnown RBP19.14■□□□□ 0.65
CCNC-213ENST00000523541 HYAL1Q12794 435 aa19.14■□□□□ 0.65
CCNC-213ENST00000523541 CLUL1Q15846 466 aa19.14■□□□□ 0.65
CCNC-213ENST00000523541 CTC1Q2NKJ3 1217 aa19.14■□□□□ 0.65
CCNC-213ENST00000523541 CLLU1OSQ5K130 101 aa19.14■□□□□ 0.65
CCNC-213ENST00000523541 KRT79Q5XKE5 535 aa19.14■□□□□ 0.65
CCNC-213ENST00000523541 ARL6IP4Q66PJ3 421 aaKnown RBP19.14■□□□□ 0.65
CCNC-213ENST00000523541 KCNT2Q6UVM3 1135 aa19.14■□□□□ 0.65
CCNC-213ENST00000523541 LRRC55Q6ZSA7 311 aa19.14■□□□□ 0.65
CCNC-213ENST00000523541 ZNF558Q96NG5 402 aa19.14■□□□□ 0.65
CCNC-213ENST00000523541 KANSL3Q9P2N6 904 aa19.14■□□□□ 0.65
CCNC-213ENST00000523541 HCSTQ9UBK5 93 aa19.14■□□□□ 0.65
CCNC-213ENST00000523541 STK39Q9UEW8 545 aa19.14■□□□□ 0.65
CCNC-213ENST00000523541 PCDHB2Q9Y5E7 798 aa19.14■□□□□ 0.65
CCNC-213ENST00000523541 CNTNAP2Q9UHC6 1331 aa19.14■□□□□ 0.65
CCNC-213ENST00000523541 ARHGEF35A5YM69 484 aa19.13■□□□□ 0.65
CCNC-213ENST00000523541 GLRA2P23416 452 aa19.13■□□□□ 0.65
CCNC-213ENST00000523541 SSTR3P32745 418 aaPredicted RBP19.13■□□□□ 0.65
CCNC-213ENST00000523541 ALDH7A1P49419 539 aaKnown RBP19.13■□□□□ 0.65
CCNC-213ENST00000523541 NDUFV1P49821 464 aa19.13■□□□□ 0.65
CCNC-213ENST00000523541 ATP2C1P98194 919 aaPredicted RBP19.13■□□□□ 0.65
CCNC-213ENST00000523541 CAPSQ13938 189 aa19.13■□□□□ 0.65
CCNC-213ENST00000523541 LONRF3Q496Y0 759 aa19.13■□□□□ 0.65
CCNC-213ENST00000523541 NOTUMQ6P988 496 aa19.13■□□□□ 0.65
CCNC-213ENST00000523541 PADI6Q6TGC4 694 aa19.13■□□□□ 0.65
CCNC-213ENST00000523541 BRAPQ7Z569 592 aa19.13■□□□□ 0.65
CCNC-213ENST00000523541 RBM23Q86U06 439 aaKnown RBP19.13■□□□□ 0.65
CCNC-213ENST00000523541 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.13■□□□□ 0.65
CCNC-213ENST00000523541 HELQQ8TDG4 1101 aa19.13■□□□□ 0.65
CCNC-213ENST00000523541 INTS4Q96HW7 963 aaKnown RBP19.13■□□□□ 0.65
CCNC-213ENST00000523541 PRIMPOLQ96LW4 560 aa19.13■□□□□ 0.65
CCNC-213ENST00000523541 C2orf40Q9H1Z8 148 aa19.13■□□□□ 0.65
CCNC-213ENST00000523541 SPG21Q9NZD8 308 aa19.13■□□□□ 0.65
CCNC-213ENST00000523541 DNM3Q9UQ16 869 aa19.13■□□□□ 0.65
CCNC-213ENST00000523541 FNDC1Q4ZHG4 1894 aaPredicted RBP19.13■□□□□ 0.65
CCNC-213ENST00000523541 INO80B-WBP1J3KQ70 363 aa19.12■□□□□ 0.65
CCNC-213ENST00000523541 SLC26A4O43511 780 aa19.12■□□□□ 0.65
CCNC-213ENST00000523541 USO1O60763 962 aaKnown RBP19.12■□□□□ 0.65
CCNC-213ENST00000523541 BMP15O95972 392 aa19.12■□□□□ 0.65
CCNC-213ENST00000523541 IL9P15248 144 aa19.12■□□□□ 0.65
CCNC-213ENST00000523541 NCLP19338 710 aaKnown RBP19.12■□□□□ 0.65
CCNC-213ENST00000523541 DNAJB1P25685 340 aa19.12■□□□□ 0.65
CCNC-213ENST00000523541 CA8P35219 290 aa19.12■□□□□ 0.65
CCNC-213ENST00000523541 NBR1Q14596 966 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms