RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 HOXA11P31270 313 aaPredicted RBP14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 NPEPPSP55786 919 aa14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 BCAR1P56945 870 aa14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 GIT2Q14161 759 aa14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 SMC1AQ14683 1233 aaKnown RBP14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 BMS1Q14692 1282 aaKnown RBP14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 EARS2Q5JPH6 523 aaKnown RBP14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 PIK3AP1Q6ZUJ8 805 aa14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 DDX53Q86TM3 631 aaKnown RBP14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 ZNF579Q8NAF0 562 aaKnown RBP14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 PRPF31Q8WWY3 499 aaKnown RBP14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 PGBD4Q96DM1 585 aa14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 CEP170P1Q96L14 293 aa14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 MFSD14AQ96MC6 490 aa14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 SH2D3AQ9BRG2 576 aa14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 FAM105AQ9NUU6 356 aa14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 PPP4R2Q9NY27 417 aa14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 MUTYHQ9UIF7 546 aa14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 COL4A3BPQ9Y5P4 624 aa14.15□□□□□ -0.14
TOP1MT-217ENST00000523417 CSPG5O95196 566 aa14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 GALTP07902 379 aa14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 XRCC6P12956 609 aaKnown RBP eCLIP14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 YWHABP31946 246 aaKnown RBP14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 AK2P54819 239 aa14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 RBM10P98175 930 aaKnown RBP14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 ITIH3Q06033 890 aa14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 NOMO2Q5JPE7 1267 aa14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 PLPP4Q5VZY2 271 aa14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 TWF2Q6IBS0 349 aaKnown RBP14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 GLB1LQ6UWU2 654 aa14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 CATSPER4Q7RTX7 472 aa14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 IFNLR1Q8IU57 520 aaPredicted RBP14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 KSR1Q8IVT5 923 aa14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 RNF169Q8NCN4 708 aa14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 TCP11Q8WWU5 503 aa14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 PSPC1Q8WXF1 523 aaKnown RBP14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 CASP10Q92851 521 aa14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 ENTPD7Q9NQZ7 604 aa14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 GJB4Q9NTQ9 266 aa14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 AGPAT5Q9NUQ2 364 aa14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 KANSL3Q9P2N6 904 aa14.14□□□□□ -0.15
TOP1MT-217ENST00000523417 KIAA1671Q9BY89 1806 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 INPPL1O15357 1258 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 CLASP2O75122 1294 aaKnown RBP14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 CXCL14O95715 111 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 AXLP30530 894 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 PBX3P40426 434 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 TECP42680 631 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 ZXDAP98168 799 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 LAMTOR4Q0VGL1 99 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 MXD4Q14582 209 aaPredicted RBP14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 ME3Q16798 604 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 TPRNQ4KMQ1 711 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 PLA2G4FQ68DD2 849 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 TRIM67Q6ZTA4 783 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 HFE2Q6ZVN8 426 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 FERMT3Q86UX7 667 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 CNNM3Q8NE01 707 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 GTF3C6Q969F1 213 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 TMEM169Q96HH4 297 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 IGSF21Q96ID5 467 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 LXNQ9BS40 222 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 ADAM7Q9H2U9 754 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 NRDE2Q9H7Z3 1164 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 UBN1Q9NPG3 1134 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 ANKEF1Q9NU02 776 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 TBC1D13Q9NVG8 400 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 RGL1Q9NZL6 768 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 PCDHA12Q9UN75 941 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 PIN4Q9Y237 131 aaKnown RBP14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 PCDHB2Q9Y5E7 798 aa14.13□□□□□ -0.15
TOP1MT-217ENST00000523417 WDR81Q562E7 1941 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 NEFLP07196 543 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 CTSAP10619 480 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 KRT2P35908 639 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 NR5A1Q13285 461 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 UBXN11Q5T124 520 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 AGMOQ6ZNB7 445 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 POTEDQ86YR6 584 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 VPS52Q8N1B4 723 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 TMEM143Q96AN5 459 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 DYDC2Q96IM9 177 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 NLRP4Q96MN2 994 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 NECTIN4Q96NY8 510 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 MTMR9Q96QG7 549 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 NFKBIZQ9BYH8 718 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 ZBP1Q9H171 429 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 MINDY3Q9H8M7 445 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 BRMS1Q9HCU9 246 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 HCFC2Q9Y5Z7 792 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 PLXNA4Q9HCM2 1894 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 CNTNAP2Q9UHC6 1331 aa14.12□□□□□ -0.15
TOP1MT-217ENST00000523417 MEIS3P2A8K0S8 358 aa14.11□□□□□ -0.15
TOP1MT-217ENST00000523417 NT5C1B-RDH14C9J2C7 533 aa14.11□□□□□ -0.15
TOP1MT-217ENST00000523417 ZBTB39O15060 712 aa14.11□□□□□ -0.15
TOP1MT-217ENST00000523417 MARCH6O60337 910 aa14.11□□□□□ -0.15
TOP1MT-217ENST00000523417 LILRB3O75022 631 aa14.11□□□□□ -0.15
TOP1MT-217ENST00000523417 ALDH2P05091 517 aa14.11□□□□□ -0.15
TOP1MT-217ENST00000523417 SRGAP2CP0DJJ0 459 aa14.11□□□□□ -0.15
TOP1MT-217ENST00000523417 NCLP19338 710 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms