RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 ZSWIM4Q9H7M6 989 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 ELP3Q9H9T3 547 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 A1CFQ9NQ94 594 aaKnown RBP7.57□□□□□ -1.2
CSMD1-211ENST00000523062 TPSG1Q9NRR2 321 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 CYP39A1Q9NYL5 469 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 TBC1D7Q9P0N9 293 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 SEL1LQ9UBV2 794 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 ODF2LQ9ULJ1 636 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 KCNH4Q9UQ05 1017 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 A0A0G2JMZ2 1700 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 POLR2AP24928 1970 aaKnown RBP7.57□□□□□ -1.2
CSMD1-211ENST00000523062 UBE4BO95155 1302 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 WDR64B1ANS9 1081 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 B4DLN1 442 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 PES1O00541 588 aaKnown RBP7.56□□□□□ -1.2
CSMD1-211ENST00000523062 MAFGO15525 162 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 GNA14O95837 355 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 GYPCP04921 128 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 GUCY2CP25092 1073 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 TERF1P54274 439 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 ADKP55263 362 aaKnown RBP7.56□□□□□ -1.2
CSMD1-211ENST00000523062 RBL2Q08999 1139 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 GOLGA8FQ08AF8 430 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 RAD51AP2Q09MP3 1159 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 GOLGA8DPQ0D2H9 430 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 LRP8Q14114 963 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 MAN2A1Q16706 1144 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 BMT2Q1RMZ1 405 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 EDRF1Q3B7T1 1238 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 GNPTABQ3T906 1256 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 CCDC40Q4G0X9 1142 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 EAPPQ56P03 285 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-211ENST00000523062 EFHC2Q5JST6 749 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 TREML2Q5T2D2 321 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 ZNF746Q6NUN9 644 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-211ENST00000523062 DLK2Q6UY11 383 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 STXBP4Q6ZWJ1 553 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 C1orf186Q6ZWK4 172 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 CHSY3Q70JA7 882 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 EPM2AIP1Q7L775 607 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-211ENST00000523062 CYP2U1Q7Z449 544 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 PNMA8AQ86V59 439 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-211ENST00000523062 VSIG10LQ86VR7 867 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 RIOX2Q8IUF8 465 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 TMEM139Q8IV31 216 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 NELFCDQ8IXH7 590 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 ZC3H3Q8IXZ2 948 aaKnown RBP7.56□□□□□ -1.2
CSMD1-211ENST00000523062 BANK1Q8NDB2 785 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 GLIS3Q8NEA6 775 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 DNERQ8NFT8 737 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 ZNF507Q8TCN5 953 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 PIGOQ8TEQ8 1089 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 SCFD1Q8WVM8 642 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 PRIMPOLQ96LW4 560 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 CCDC43Q96MW1 224 aaKnown RBP7.56□□□□□ -1.2
CSMD1-211ENST00000523062 INPP4AQ96PE3 977 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-211ENST00000523062 IWS1Q96ST2 819 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 NOC4LQ9BVI4 516 aaKnown RBP7.56□□□□□ -1.2
CSMD1-211ENST00000523062 FGFBP2Q9BYJ0 223 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 OLFML3Q9NRN5 406 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 DBR1Q9UK59 544 aaKnown RBP7.56□□□□□ -1.2
CSMD1-211ENST00000523062 AGTPBP1Q9UPW5 1226 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 SAMM50Q9Y512 469 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 COL11A1P12107 1806 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-211ENST00000523062 PTPRFP10586 1907 aa7.56□□□□□ -1.2
CSMD1-211ENST00000523062 SCN4AP35499 1836 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 LOXHD1Q8IVV2 1947 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 GOLGA6L9A6NEM1 432 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 TRAF5O00463 557 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 EIF3DO15371 548 aaKnown RBP eCLIP7.55□□□□□ -1.2
CSMD1-211ENST00000523062 ZSCAN12O43309 604 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 CALUO43852 315 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-211ENST00000523062 DKC1O60832 514 aaKnown RBP eCLIP7.55□□□□□ -1.2
CSMD1-211ENST00000523062 TUBB4AP04350 444 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 TNNT1P13805 278 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 CASP14P31944 242 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 QARSP47897 775 aaKnown RBP7.55□□□□□ -1.2
CSMD1-211ENST00000523062 ZNF131P52739 623 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 PSMC5P62195 406 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 TBC1D8BQ0IIM8 1120 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 PTPN14Q15678 1187 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 KNOP1Q1ED39 458 aaKnown RBP7.55□□□□□ -1.2
CSMD1-211ENST00000523062 MIIPQ5JXC2 388 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 E4F1Q66K89 784 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-211ENST00000523062 FASTKD5Q7L8L6 764 aaKnown RBP7.55□□□□□ -1.2
CSMD1-211ENST00000523062 SMAP1Q8IYB5 467 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-211ENST00000523062 RETREG2Q8NC44 543 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 ABHD17AQ96GS6 310 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 CLMNQ96JQ2 1002 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 PPP1R13BQ96KQ4 1090 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 C16orf45Q96MC5 204 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-211ENST00000523062 ERGIC2Q96RQ1 377 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 SENP7Q9BQF6 1050 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 NUP58Q9BVL2 599 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 TIPINQ9BVW5 301 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 PLVAPQ9BX97 442 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 KCTD10Q9H3F6 313 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 MRPL44Q9H9J2 332 aaKnown RBP7.55□□□□□ -1.2
CSMD1-211ENST00000523062 PARVGQ9HBI0 331 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 HMX1Q9NP08 348 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms