RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 SFXN1Q9H9B4 322 aa5.91□□□□□ -1.46
SDC2-206ENST00000521590 WDR6Q9NNW5 1121 aaKnown RBP5.91□□□□□ -1.46
SDC2-206ENST00000521590 PGPEP1Q9NXJ5 209 aa5.91□□□□□ -1.46
SDC2-206ENST00000521590 KCNK4Q9NYG8 393 aa5.91□□□□□ -1.46
SDC2-206ENST00000521590 SYNPO2Q9UMS6 1093 aa5.91□□□□□ -1.46
SDC2-206ENST00000521590 IRAK3Q9Y616 596 aa5.91□□□□□ -1.46
SDC2-206ENST00000521590 NUMBLQ9Y6R0 609 aa5.91□□□□□ -1.46
SDC2-206ENST00000521590 URB1O60287 2271 aaKnown RBP5.91□□□□□ -1.46
SDC2-206ENST00000521590 APC2O95996 2303 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 TCRBV5S4A2TA0A5A2 114 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 C4orf47A7E2U8 309 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 TBKBP1A7MCY6 615 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 CHURC1-FNTBB4DL54 471 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 ITGB2P05107 769 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 LAG3P18627 525 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 RAP1GAPP47736 663 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 FNTBP49356 437 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 MARSP56192 900 aaKnown RBP5.9□□□□□ -1.46
SDC2-206ENST00000521590 RELBQ01201 579 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 GAS6Q14393 721 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 TUSC1Q2TAM9 212 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 CABP7Q86V35 215 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 ZNF513Q8N8E2 541 aaPredicted RBP5.9□□□□□ -1.46
SDC2-206ENST00000521590 RNF217Q8TC41 542 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 AUTS2Q8WXX7 1259 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 GLG1Q92896 1179 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 FGF14Q92915 247 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 CEP95Q96GE4 821 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 GMCL1Q96IK5 515 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 KCTD15Q96SI1 283 aaPredicted RBP5.9□□□□□ -1.46
SDC2-206ENST00000521590 USP26Q9BXU7 913 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 FTHL17Q9BXU8 183 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 CCDC8Q9H0W5 538 aaPredicted RBP5.9□□□□□ -1.46
SDC2-206ENST00000521590 ATP8A2Q9NTI2 1148 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 CUEDC1Q9NWM3 386 aaPredicted RBP5.9□□□□□ -1.46
SDC2-206ENST00000521590 MTMR4Q9NYA4 1195 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 PADI3Q9ULW8 664 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 SRPK3Q9UPE1 567 aa5.9□□□□□ -1.46
SDC2-206ENST00000521590 NBPF19A0A087WUL8 3843 aa5.9□□□□□ -1.47
SDC2-206ENST00000521590 COL5A1P20908 1838 aaPredicted RBP5.9□□□□□ -1.47
SDC2-206ENST00000521590 MYH6P13533 1939 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 SPTAN1Q13813 2472 aaKnown RBP5.89□□□□□ -1.47
SDC2-206ENST00000521590 ATG2BQ96BY7 2078 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 PYCARD-AS1I3L0S3 204 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 NCAM2O15394 837 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 SRGAP3O43295 1099 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 EPN2O95208 641 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 HOXC13P31276 330 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 SARSP49591 514 aaKnown RBP5.89□□□□□ -1.47
SDC2-206ENST00000521590 SP2Q02086 613 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 KRT17Q04695 432 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 ADCY1Q08828 1119 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 MTX1Q13505 466 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 TNNI3KQ59H18 835 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 INTS6LQ5JSJ4 861 aaKnown RBP5.89□□□□□ -1.47
SDC2-206ENST00000521590 XP32Q5T750 250 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 TCEAL6Q6IPX3 200 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 CTR9Q6PD62 1173 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 KCTD1Q719H9 257 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 LSM14AQ8ND56 463 aaKnown RBP5.89□□□□□ -1.47
SDC2-206ENST00000521590 LMBR1Q8WVP7 490 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 TCEAL3Q969E4 200 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 CHMP4CQ96CF2 233 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 LOXL4Q96JB6 756 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 MPHOSPH6Q99547 160 aaKnown RBP5.89□□□□□ -1.47
SDC2-206ENST00000521590 OCSTAMPQ9BR26 566 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 MKNK1Q9BUB5 465 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 RHOBTB2Q9BYZ6 727 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 ZBP1Q9H171 429 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 RANBP17Q9H2T7 1088 aaKnown RBP5.89□□□□□ -1.47
SDC2-206ENST00000521590 CHRDQ9H2X0 955 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 ZNF395Q9H8N7 513 aaPredicted RBP5.89□□□□□ -1.47
SDC2-206ENST00000521590 ARMT1Q9H993 441 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 SPG21Q9NZD8 308 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 LRFN2Q9ULH4 789 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 RAXQ9Y2V3 346 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 PCDHB7Q9Y5E2 793 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 SQORQ9Y6N5 450 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 FPGT-TNNI3KV9GXZ4 949 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 CLUHO75153 1309 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 PTPRCP08575 1304 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 ZBED9Q6R2W3 1325 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 NOTCH4Q99466 2003 aa5.89□□□□□ -1.47
SDC2-206ENST00000521590 DOPEY2Q9Y3R5 2298 aa5.88□□□□□ -1.47
SDC2-206ENST00000521590 FLNCQ14315 2725 aa5.88□□□□□ -1.47
SDC2-206ENST00000521590 B4DLN1 442 aa5.88□□□□□ -1.47
SDC2-206ENST00000521590 K7ESF4 209 aa5.88□□□□□ -1.47
SDC2-206ENST00000521590 MGEA5O60502 916 aa5.88□□□□□ -1.47
SDC2-206ENST00000521590 SORBS3O60504 671 aa5.88□□□□□ -1.47
SDC2-206ENST00000521590 PAPLNO95428 1278 aa5.88□□□□□ -1.47
SDC2-206ENST00000521590 LGALS2P05162 132 aa5.88□□□□□ -1.47
SDC2-206ENST00000521590 CELA2BP08218 269 aaPredicted RBP5.88□□□□□ -1.47
SDC2-206ENST00000521590 GNAT1P11488 350 aa5.88□□□□□ -1.47
SDC2-206ENST00000521590 PDE6AP16499 860 aa5.88□□□□□ -1.47
SDC2-206ENST00000521590 MCCP23508 829 aa5.88□□□□□ -1.47
SDC2-206ENST00000521590 CCR10P46092 362 aa5.88□□□□□ -1.47
SDC2-206ENST00000521590 CLCN4P51793 760 aa5.88□□□□□ -1.47
SDC2-206ENST00000521590 MRPL12P52815 198 aaKnown RBP5.88□□□□□ -1.47
SDC2-206ENST00000521590 FGD1P98174 961 aa5.88□□□□□ -1.47
SDC2-206ENST00000521590 SATB1Q01826 763 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms