RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 NTSR2O95665 410 aa7.58□□□□□ -1.2
PABPC1-216ENST00000520868 C8BP07358 591 aa7.58□□□□□ -1.2
PABPC1-216ENST00000520868 PABPC1P11940 636 aaKnown RBP7.58□□□□□ -1.2
PABPC1-216ENST00000520868 EIF2S2P20042 333 aaKnown RBP7.58□□□□□ -1.2
PABPC1-216ENST00000520868 DLX2Q07687 328 aaPredicted RBP7.58□□□□□ -1.2
PABPC1-216ENST00000520868 IFRD2Q12894 506 aaPredicted RBP7.58□□□□□ -1.2
PABPC1-216ENST00000520868 CD300LDQ6UXZ3 194 aa7.58□□□□□ -1.2
PABPC1-216ENST00000520868 USP50Q70EL3 339 aaPredicted RBP7.58□□□□□ -1.2
PABPC1-216ENST00000520868 NIM1KQ8IY84 436 aa7.58□□□□□ -1.2
PABPC1-216ENST00000520868 LINC00482Q8N8I6 264 aa7.58□□□□□ -1.2
PABPC1-216ENST00000520868 ABHD8Q96I13 439 aa7.58□□□□□ -1.2
PABPC1-216ENST00000520868 CAPNS2Q96L46 248 aa7.58□□□□□ -1.2
PABPC1-216ENST00000520868 GPR101Q96P66 508 aaPredicted RBP7.58□□□□□ -1.2
PABPC1-216ENST00000520868 NTMQ9P121 344 aa7.58□□□□□ -1.2
PABPC1-216ENST00000520868 PCDHB4Q9Y5E5 795 aa7.58□□□□□ -1.2
PABPC1-216ENST00000520868 ARFGEF2Q9Y6D5 1785 aa7.57□□□□□ -1.2
PABPC1-216ENST00000520868 KRIT1O00522 736 aa7.57□□□□□ -1.2
PABPC1-216ENST00000520868 ANXA1P04083 346 aa7.57□□□□□ -1.2
PABPC1-216ENST00000520868 GTF2F1P35269 517 aaKnown RBP eCLIP7.57□□□□□ -1.2
PABPC1-216ENST00000520868 NKX3-2P78367 333 aa7.57□□□□□ -1.2
PABPC1-216ENST00000520868 NFE2L2Q16236 605 aa7.57□□□□□ -1.2
PABPC1-216ENST00000520868 MTERF2Q49AM1 385 aa7.57□□□□□ -1.2
PABPC1-216ENST00000520868 ERICH6BQ5W0A0 696 aa7.57□□□□□ -1.2
PABPC1-216ENST00000520868 CST9Q5W186 159 aa7.57□□□□□ -1.2
PABPC1-216ENST00000520868 PPP1R42Q7Z4L9 355 aa7.57□□□□□ -1.2
PABPC1-216ENST00000520868 PHOSPHO1Q8TCT1 267 aa7.57□□□□□ -1.2
PABPC1-216ENST00000520868 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.57□□□□□ -1.2
PABPC1-216ENST00000520868 OSBP2Q969R2 916 aa7.57□□□□□ -1.2
PABPC1-216ENST00000520868 PLEKHF1Q96S99 279 aa7.57□□□□□ -1.2
PABPC1-216ENST00000520868 UTP14AQ9BVJ6 771 aaKnown RBP7.57□□□□□ -1.2
PABPC1-216ENST00000520868 SPATA9Q9BWV2 254 aa7.57□□□□□ -1.2
PABPC1-216ENST00000520868 SNED1Q8TER0 1413 aa7.57□□□□□ -1.2
PABPC1-216ENST00000520868 COL4A5P29400 1685 aa7.57□□□□□ -1.2
PABPC1-216ENST00000520868 CCDC85CA6NKD9 419 aa7.56□□□□□ -1.2
PABPC1-216ENST00000520868 FOXD2O60548 495 aaPredicted RBP7.56□□□□□ -1.2
PABPC1-216ENST00000520868 TADA3O75528 432 aa7.56□□□□□ -1.2
PABPC1-216ENST00000520868 ECE1P42892 770 aa7.56□□□□□ -1.2
PABPC1-216ENST00000520868 CXCL9Q07325 125 aa7.56□□□□□ -1.2
PABPC1-216ENST00000520868 AIMP1Q12904 312 aaKnown RBP7.56□□□□□ -1.2
PABPC1-216ENST00000520868 KIZQ2M2Z5 673 aa7.56□□□□□ -1.2
PABPC1-216ENST00000520868 PARP10Q53GL7 1025 aa7.56□□□□□ -1.2
PABPC1-216ENST00000520868 FRMD5Q7Z6J6 570 aa7.56□□□□□ -1.2
PABPC1-216ENST00000520868 CARFQ8N187 725 aa7.56□□□□□ -1.2
PABPC1-216ENST00000520868 KYQ8NBH2 561 aa7.56□□□□□ -1.2
PABPC1-216ENST00000520868 GORASP1Q9BQQ3 440 aa7.56□□□□□ -1.2
PABPC1-216ENST00000520868 SPATA25Q9BR10 227 aa7.56□□□□□ -1.2
PABPC1-216ENST00000520868 C11orf84Q9BUA3 381 aaPredicted RBP7.56□□□□□ -1.2
PABPC1-216ENST00000520868 SMOC1Q9H4F8 434 aa7.56□□□□□ -1.2
PABPC1-216ENST00000520868 ADARB2Q9NS39 739 aaKnown RBP7.56□□□□□ -1.2
PABPC1-216ENST00000520868 GPRC5DQ9NZD1 345 aa7.56□□□□□ -1.2
PABPC1-216ENST00000520868 TSPYL4Q9UJ04 414 aa7.56□□□□□ -1.2
PABPC1-216ENST00000520868 ATP6V0A2Q9Y487 856 aa7.56□□□□□ -1.2
PABPC1-216ENST00000520868 ABCC4O15439 1325 aa7.55□□□□□ -1.2
PABPC1-216ENST00000520868 MAPK8IP3Q9UPT6 1336 aa7.55□□□□□ -1.2
PABPC1-216ENST00000520868 RAD17O75943 681 aa7.55□□□□□ -1.2
PABPC1-216ENST00000520868 CELF2O95319 508 aaKnown RBP7.55□□□□□ -1.2
PABPC1-216ENST00000520868 SARSP49591 514 aaKnown RBP7.55□□□□□ -1.2
PABPC1-216ENST00000520868 GMPSP49915 693 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-216ENST00000520868 GPR85P60893 370 aa7.55□□□□□ -1.2
PABPC1-216ENST00000520868 SF3A1Q15459 793 aaKnown RBP7.55□□□□□ -1.2
PABPC1-216ENST00000520868 PROSER3Q2NL68 480 aa7.55□□□□□ -1.2
PABPC1-216ENST00000520868 SLC10A5Q5PT55 438 aa7.55□□□□□ -1.2
PABPC1-216ENST00000520868 DPP8Q6V1X1 898 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-216ENST00000520868 LBX2Q6XYB7 198 aa7.55□□□□□ -1.2
PABPC1-216ENST00000520868 COPS6Q7L5N1 327 aa7.55□□□□□ -1.2
PABPC1-216ENST00000520868 TRIM48Q8IWZ4 208 aa7.55□□□□□ -1.2
PABPC1-216ENST00000520868 IFNL3Q8IZI9 196 aa7.55□□□□□ -1.2
PABPC1-216ENST00000520868 FAM26EQ8N5C1 309 aa7.55□□□□□ -1.2
PABPC1-216ENST00000520868 SUPT20HQ8NEM7 779 aa7.55□□□□□ -1.2
PABPC1-216ENST00000520868 TEPSINQ96N21 525 aa7.55□□□□□ -1.2
PABPC1-216ENST00000520868 IPO9Q96P70 1041 aaKnown RBP7.55□□□□□ -1.2
PABPC1-216ENST00000520868 GLIS2Q9BZE0 524 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-216ENST00000520868 DTLQ9NZJ0 730 aa7.55□□□□□ -1.2
PABPC1-216ENST00000520868 MYOTQ9UBF9 498 aa7.55□□□□□ -1.2
PABPC1-216ENST00000520868 NUB1Q9Y5A7 615 aa7.55□□□□□ -1.2
PABPC1-216ENST00000520868 IBTKQ9P2D0 1353 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-216ENST00000520868 ADAMTSL1Q8N6G6 1762 aa7.54□□□□□ -1.2
PABPC1-216ENST00000520868 TCRBV5S2A0A599 114 aa7.54□□□□□ -1.2
PABPC1-216ENST00000520868 MSCO60682 206 aa7.54□□□□□ -1.2
PABPC1-216ENST00000520868 BBOX1O75936 387 aa7.54□□□□□ -1.2
PABPC1-216ENST00000520868 RIPK4P57078 832 aa7.54□□□□□ -1.2
PABPC1-216ENST00000520868 SSRP1Q08945 709 aaKnown RBP7.54□□□□□ -1.2
PABPC1-216ENST00000520868 SMAD4Q13485 552 aaKnown RBP7.54□□□□□ -1.2
PABPC1-216ENST00000520868 SPATC1Q76KD6 591 aa7.54□□□□□ -1.2
PABPC1-216ENST00000520868 DDX46Q7L014 1031 aaKnown RBP7.54□□□□□ -1.2
PABPC1-216ENST00000520868 LRP10Q7Z4F1 713 aa7.54□□□□□ -1.2
PABPC1-216ENST00000520868 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.54□□□□□ -1.2
PABPC1-216ENST00000520868 TOE1Q96GM8 510 aaKnown RBP7.54□□□□□ -1.2
PABPC1-216ENST00000520868 CDC6Q99741 560 aa7.54□□□□□ -1.2
PABPC1-216ENST00000520868 KRTAP4-11Q9BYQ6 195 aa7.54□□□□□ -1.2
PABPC1-216ENST00000520868 VPS33BQ9H267 617 aa7.54□□□□□ -1.2
PABPC1-216ENST00000520868 CDIP1Q9H305 208 aa7.54□□□□□ -1.2
PABPC1-216ENST00000520868 PNNQ9H307 717 aaKnown RBP7.54□□□□□ -1.2
PABPC1-216ENST00000520868 SLC6A20Q9NP91 592 aa7.54□□□□□ -1.2
PABPC1-216ENST00000520868 USP40Q9NVE5 1235 aa7.54□□□□□ -1.2
PABPC1-216ENST00000520868 SPATA6Q9NWH7 488 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-216ENST00000520868 TRMT112Q9UI30 125 aaKnown RBP7.54□□□□□ -1.2
PABPC1-216ENST00000520868 LTBP1Q14766 1721 aa7.54□□□□□ -1.2
PABPC1-216ENST00000520868 RIC1Q4ADV7 1423 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 SHTN1A0MZ66 631 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms