RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 KIAA0895Q8NCT3 520 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 SPON1Q9HCB6 807 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 MAD2L2Q9UI95 211 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 PHF20L1A8MW92 1017 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 KLRC4O43908 158 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 HSD17B3P37058 310 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 SLC12A2P55011 1212 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 CCNA1P78396 465 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 DRP2Q13474 957 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 PPP4R3CPQ6ZMV5 832 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 DCAF4Q8WV16 495 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 NSMCE1Q8WV22 266 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 WRNIP1Q96S55 665 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 CALN1Q9BXU9 219 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 ISCUQ9H1K1 167 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 SLC40A1Q9NP59 571 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 PIM2Q9P1W9 311 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 GIPC1O14908 333 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 ACTN1P12814 892 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 YWHAGP61981 247 aaKnown RBP eCLIP11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 SKOR1P84550 965 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 ITPK1Q13572 414 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 NAALADL2Q58DX5 795 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 MICAL1Q8TDZ2 1067 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 ATP2A3Q93084 1043 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 DNAJC17Q9NVM6 304 aaKnown RBP11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 TTI1O43156 1089 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 CIB2O75838 187 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 PSAPP07602 524 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 PCK1P35558 622 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 FUT2Q10981 343 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 ORC2Q13416 577 aaPredicted RBP11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 CENPPQ6IPU0 288 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 PADI6Q6TGC4 694 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 ZNF662Q6ZS27 426 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 DAGLBQ8NCG7 672 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 CHMP6Q96FZ7 201 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 DYDC2Q96IM9 177 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 ZNF668Q96K58 619 aaPredicted RBP11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 SPZ1Q9BXG8 430 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 DNAJC12Q9UKB3 198 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 NPHP3-ACAD11A0A0J9YXS1 232 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 TLR3O15455 904 aaKnown RBP11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 NR3C1P04150 777 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 TBC1D16Q8TBP0 767 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.62□□□□□ -0.551e-7■■■■■ 78
PCDHGA1-202ENST00000517417 TNFRSF25Q93038 417 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 SEC16BQ96JE7 1060 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 MXD3Q9BW11 206 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 PACSIN1Q9BY11 444 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 ABCB11O95342 1321 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 A0A087X0T9 212 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 FAM228BP0C875 321 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 NT5C2P49902 561 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 GRB10Q13322 594 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 ZNF211Q13398 564 aaPredicted RBP11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 ZKSCAN8Q15776 578 aaPredicted RBP11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 ANKS1AQ92625 1134 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 ANKRD36BP1Q96IX9 119 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 SLITRK6Q9H5Y7 841 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 PFDN4Q9NQP4 134 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 KLHL14Q9P2G3 628 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 ZNF233A6NK53 670 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 SUN1O94901 812 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 SF3B3Q15393 1217 aaKnown RBP11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 SLC17A8Q8NDX2 589 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 NLRP7Q8WX94 980 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 TYW1Q9NV66 732 aaKnown RBP11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 TBK1Q9UHD2 729 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 COL5A2P05997 1499 aaPredicted RBP11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 COL18A1P39060 1754 aa11.62□□□□□ -0.55
PCDHGA1-202ENST00000517417 LRRD1A4D1F6 860 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 AGPSO00116 658 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 EPHB6O15197 1021 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 SLC16A4O15374 487 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 NTSR2O95665 410 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 PHBP35232 272 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 SARNPP82979 210 aaKnown RBP11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 ITKQ08881 620 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 MIIPQ5JXC2 388 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 SNRNP48Q6IEG0 339 aaKnown RBP11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 MAP7D3Q8IWC1 876 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 TRIM51Q9BSJ1 452 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 SCAF8Q9UPN6 1271 aaKnown RBP11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 RASGRF2O14827 1237 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 GCKP35557 465 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 PRR5LQ6MZQ0 368 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 RFX6Q8HWS3 928 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 RPS6KC1Q96S38 1066 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 MSTO1Q9BUK6 570 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 FAM49AQ9H0Q0 323 aaPredicted RBP11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 TMBIM4Q9HC24 238 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 DAGLAQ9Y4D2 1042 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 DNAJC24Q6P3W2 148 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 KLHL29Q96CT2 875 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 FAM20AQ96MK3 541 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 VCPKMTQ9H867 229 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 RGL1Q9NZL6 768 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms