RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 ALG6Q9Y672 507 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 USH1CQ9Y6N9 552 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 DUSP10Q9Y6W6 482 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 A0A1B0GUL6 1792 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 BCL9O00512 1426 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 DDX60Q8IY21 1712 aaKnown RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 MEGF6O75095 1541 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 ZNF142P52746 1687 aaPredicted RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 BCL9LQ86UU0 1499 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 PXDNQ92626 1479 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 LAMB1P07942 1786 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 CYP2D7A0A087X1C5 515 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 IQANK1A0A1B0GTG1 560 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 FAM205CA6NFA0 338 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 TTC36A6NLP5 189 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 DISP2A7MBM2 1401 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 USP17L5A8MUK1 530 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 VGLL3A8MV65 326 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 POTECB2RU33 542 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 RNF225M0QZC1 329 aaPredicted RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 M0R2N6 131 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 AGPSO00116 658 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 CLIC2O15247 247 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 DAPK3O43293 454 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 RAD51CO43502 376 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 MED7O43513 233 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 LZTS3O60299 673 aaPredicted RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 NMT2O60551 498 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZBED4O75132 1171 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 PHF2O75151 1096 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZC3H11AO75152 810 aaKnown RBP eCLIP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 ATP2C2O75185 946 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 CDH16O75309 829 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 PPFIA2O75334 1257 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF189O75820 626 aaPredicted RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 CIB2O75838 187 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 RNF8O76064 485 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 TOMM70O94826 608 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 UFL1O94874 794 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 STAMBPO95630 424 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 NTSR2O95665 410 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 ECEL1O95672 775 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 CFBP00751 764 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 ATP5BP06576 529 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 P4HBP07237 508 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 GLI1P08151 1106 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 MMEP08473 750 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 PLEKP08567 350 aaPredicted RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 CYP3A4P08684 503 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 NUDT17P0C025 328 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 PDHBP11177 359 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 SKIP12755 728 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 EEF2P13639 858 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 IL1R1P14778 569 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 ATF2P15336 505 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 CHN1P15882 459 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 KRT15P19012 456 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLC9A1P19634 815 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 RASA1P20936 1047 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 ABCB4P21439 1286 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 OSBPP22059 807 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 MAPK4P31152 587 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 SFNP31947 248 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 GTF2H1P32780 548 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 PCK1P35558 622 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 COILP38432 576 aaPredicted RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 MSH2P43246 934 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 NSFP46459 744 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 FMO5P49326 533 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 FNTAP49354 379 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 VAMP7P51809 220 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 PRELPP51888 382 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 CLNS1AP54105 237 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 PMS1P54277 932 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 HADHBP55084 474 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 GSCP56915 257 aaPredicted RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 PTENP60484 403 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 COPS2P61201 443 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 FKBP1AP62942 108 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 GTF2IP78347 998 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 IRX1P78414 480 aaPredicted RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 ARHGAP4P98171 946 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 CENPCQ03188 943 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 EN1Q05925 392 aaPredicted RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 ENPEPQ07075 957 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF543Q08ER8 600 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 KCNMA1Q12791 1236 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 BFSP1Q12934 665 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 PABPC4Q13310 644 aaKnown RBP eCLIP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 GRB10Q13322 594 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 ITGB3BPQ13352 177 aaPredicted RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 XRCC4Q13426 336 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 PICALMQ13492 652 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 COL9A3Q14050 684 aaPredicted RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 GIT2Q14161 759 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 SPARCL1Q14515 664 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLC29A2Q14542 456 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 PLS1Q14651 629 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 MESDQ14696 234 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 DRAP1Q14919 205 aaPredicted RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms