RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	GJC2	Q5T442	439 aa	Predicted RBP	11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	BORCS6	Q96GS4	357 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	MMP19	Q99542	508 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	PTPN18	Q99952	460 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	KCND2	Q9NZV8	630 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	ADAMTS1	Q9UHI8	967 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	CDC23	Q9UJX2	597 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	PNMA2	Q9UL42	364 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	CAPN6	Q9Y6Q1	641 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	SCN4A	P35499	1836 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	MYH10	P35580	1976 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	CDK17	Q00537	523 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	CBWD6	Q4V339	395 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	CBWD3	Q5JTY5	395 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	CBWD5	Q5RIA9	395 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	DPY19L2P1	Q6NXN4	242 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	HAUS6	Q7Z4H7	955 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	FBXO16	Q8IX29	292 aa	Predicted RBP	11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	C4orf19	Q8IY42	314 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	EXOC4	Q96A65	974 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	CAPZA3	Q96KX2	299 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	SPAG5	Q96R06	1193 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	USP20	Q9Y2K6	914 aa		11.46	□□□□□ -0.57
CDK18-222	ENST00000515494	GOLGA8IP	A6NC78	632 aa		11.46	□□□□□ -0.58
CDK18-222	ENST00000515494	GOLGA8J	A6NMD2	632 aa		11.46	□□□□□ -0.58
CDK18-222	ENST00000515494	PPP1R37	O75864	691 aa		11.46	□□□□□ -0.58
CDK18-222	ENST00000515494	MOCS3	O95396	460 aa		11.46	□□□□□ -0.58
CDK18-222	ENST00000515494	MAGEA1	P43355	309 aa		11.46	□□□□□ -0.58
CDK18-222	ENST00000515494	DLG4	P78352	724 aa		11.46	□□□□□ -0.58
CDK18-222	ENST00000515494	KLHDC7A	Q5VTJ3	777 aa		11.46	□□□□□ -0.58
CDK18-222	ENST00000515494	CEP170P1	Q96L14	293 aa		11.46	□□□□□ -0.58
CDK18-222	ENST00000515494	PSMB7	Q99436	277 aa		11.46	□□□□□ -0.58
CDK18-222	ENST00000515494	DBR1	Q9UK59	544 aa	Known RBP	11.46	□□□□□ -0.58
CDK18-222	ENST00000515494	BUB1	O43683	1085 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	PLS3	P13797	630 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	ZNF157	P51786	506 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	JAK3	P52333	1124 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	SLC9C1	Q4G0N8	1177 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	BSND	Q8WZ55	320 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	COPS5	Q92905	334 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	GPRASP2	Q96D09	838 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	JPH1	Q9HDC5	661 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK18-222	ENST00000515494		A0A087X0T9	212 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	EFCAB8	A8MWE9	144 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	FAM228B	P0C875	321 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	ACTR2	P61160	394 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	KLHL30	Q0D2K2	578 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	ASTE1	Q2TB18	679 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	GNPTAB	Q3T906	1256 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	IQCD	Q96DY2	449 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	STRA6	Q9BX79	667 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	METTL14	Q9HCE5	456 aa	Known RBP	11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	PDGFC	Q9NRA1	345 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	SLC9A2	Q9UBY0	812 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	FBXO40	Q9UH90	709 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	CPA4	Q9UI42	421 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	FRMD4B	Q9Y2L6	1034 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	MCM3AP	O60318	1980 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	ZNF185	O15231	689 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	CETP	P11597	493 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	SPRYD7	Q5W111	196 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	GBP6	Q6ZN66	633 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	STXBP4	Q6ZWJ1	553 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	PACSIN1	Q9BY11	444 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	ARFGAP3	Q9NP61	516 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK18-222	ENST00000515494	MYO6	Q9UM54	1294 aa		11.45	□□□□□ -0.58
CDK18-222	ENST00000515494		H0YHG0	523 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	SLC16A3	O15427	465 aa	Known RBP	11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	SCP2	P22307	547 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	MARK3	P27448	753 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	SFN	P31947	248 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	CHMP4BP1	P59074	171 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	SARNP	P82979	210 aa	Known RBP	11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	SAMD3	Q8N6K7	520 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	ELMO3	Q96BJ8	720 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	FAM84A	Q96KN4	292 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	SLC24A3	Q9HC58	644 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	SIX2	Q9NPC8	291 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	DMAC2	Q9NW81	257 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	SASH3	O75995	380 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	LYPLA2	O95372	231 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	ARIH2	O95376	493 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	NAP1L1	P55209	391 aa	Known RBP	11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	AMPD2	Q01433	879 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	PTK2	Q05397	1052 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	ASIC2	Q16515	512 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	ZNF746	Q6NUN9	644 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	PLCD4	Q9BRC7	762 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	MYO1A	Q9UBC5	1043 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	EIF3J	O75822	258 aa	Known RBP	11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	NEBL	O76041	1014 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	ITGBL1	O95965	494 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	SERPING1	P05155	500 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	FMO5	P49326	533 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	DNA2	P51530	1060 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	GTF2A2	P52657	109 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	GSC	P56915	257 aa	Predicted RBP	11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms