RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 COL4A4P53420 1690 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-205ENST00000514271 GOLGA8AA7E2F4 631 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 PLEKHA8P1O95397 391 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 TCP1P17987 556 aaKnown RBP8.08□□□□□ -1.12
CLIP1-205ENST00000514271 RGS2P41220 211 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 PRKCIP41743 596 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 SCTRP47872 440 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 CLK2P49760 499 aaKnown RBP8.08□□□□□ -1.12
CLIP1-205ENST00000514271 LIG3P49916 1009 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 LACTBP83111 547 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-205ENST00000514271 ITIH4Q14624 930 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 SAFBQ15424 915 aaKnown RBP eCLIP8.08□□□□□ -1.12
CLIP1-205ENST00000514271 SPDYAQ5MJ70 313 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 FAM83BQ5T0W9 1011 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 OLFML2BQ68BL8 750 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 PLEKHH3Q7Z736 793 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 RNF217Q8TC41 542 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 FAM136AQ96C01 138 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 HES6Q96HZ4 224 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 GPR88Q9GZN0 384 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 SIX2Q9NPC8 291 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 EXOC1Q9NV70 894 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 IVNS1ABPQ9Y6Y0 642 aa8.08□□□□□ -1.12
CLIP1-205ENST00000514271 NCANO14594 1321 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 A0A0A6YYK5 440 aaPredicted RBP8.07□□□□□ -1.12
CLIP1-205ENST00000514271 PDLIM1O00151 329 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 LAD1O00515 517 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 STK10O94804 968 aaKnown RBP8.07□□□□□ -1.12
CLIP1-205ENST00000514271 RXRAP19793 462 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 CCNE1P24864 410 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 HSD17B3P37058 310 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 PTGDRQ13258 359 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 TREML2Q5T2D2 321 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 XRRA1Q6P2D8 792 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 NFRKBQ6P4R8 1299 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 ZDHHC24Q6UX98 284 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 IRF2BP2Q7Z5L9 587 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 TMC3Q7Z5M5 1100 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 ANKS4BQ8N8V4 417 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 TRIM9Q9C026 710 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 SPATC1LQ9H0A9 340 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 ARHGEF3Q9NR81 526 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 TAB2Q9NYJ8 693 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 SEC63Q9UGP8 760 aaKnown RBP8.07□□□□□ -1.12
CLIP1-205ENST00000514271 MROH7Q68CQ1 1323 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 ZSCAN5CA6NGD5 496 aaPredicted RBP8.07□□□□□ -1.12
CLIP1-205ENST00000514271 DCDC2CA8MYV0 355 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 FLT3P36888 993 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 DRG2P55039 364 aaKnown RBP8.07□□□□□ -1.12
CLIP1-205ENST00000514271 ZRSR1Q15695 479 aaKnown RBP8.07□□□□□ -1.12
CLIP1-205ENST00000514271 RTN1Q16799 776 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 FBXO46Q6PJ61 603 aaPredicted RBP8.07□□□□□ -1.12
CLIP1-205ENST00000514271 C11orf96Q7Z7L8 435 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 POM121Q96HA1 1249 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 P2RX7Q99572 595 aaKnown RBP8.07□□□□□ -1.12
CLIP1-205ENST00000514271 KCTD10Q9H3F6 313 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 ACBD3Q9H3P7 528 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 ZSWIM4Q9H7M6 989 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 TLE6Q9H808 572 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 ACAD9Q9H845 621 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 PCDHA6Q9UN73 950 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 PCDHA8Q9Y5H6 950 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 MYH11P35749 1972 aa8.07□□□□□ -1.12
CLIP1-205ENST00000514271 PNMA6FA0A0J9YX94 578 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 ESYT2A0FGR8 921 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 STAM2O75886 525 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 GJB6O95452 261 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 ATP6V1G2O95670 118 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 KRT2P35908 639 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 STAT3P40763 770 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 PDCLQ13371 301 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 LHX8Q68G74 356 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 EPM2AIP1Q7L775 607 aaPredicted RBP8.06□□□□□ -1.12
CLIP1-205ENST00000514271 LRRC47Q8N1G4 583 aaKnown RBP8.06□□□□□ -1.12
CLIP1-205ENST00000514271 SH2D3CQ8N5H7 860 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 UTP4Q969X6 686 aaKnown RBP8.06□□□□□ -1.12
CLIP1-205ENST00000514271 PGM2Q96G03 612 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 AMNQ9BXJ7 453 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 SEZ6LQ9BYH1 1024 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 TMEM60Q9H2L4 133 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 MLXIPQ9HAP2 919 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 EHD2Q9NZN4 543 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 MAD2L2Q9UI95 211 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 NEU2Q9Y3R4 380 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 PLXNA1Q9UIW2 1896 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 RBM47A0AV96 593 aaKnown RBP8.06□□□□□ -1.12
CLIP1-205ENST00000514271 CYTH3O43739 400 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 NPEPPSP55786 919 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 GUCY1A3Q02108 690 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 EVX2Q03828 476 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 NEDD9Q14511 834 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 SLC5A9Q2M3M2 681 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 MFSD5Q6N075 450 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 NCSTNQ92542 709 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 DNAJC19Q96DA6 116 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 TRIM47Q96LD4 638 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 PNMA5Q96PV4 448 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 APBA2Q99767 749 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 NUDT12Q9BQG2 462 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 SLC26A6Q9BXS9 759 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms