RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 ZIM3Q96PE6 472 aa13.61□□□□□ -0.23
SDHA-216ENST00000514027 INTS2Q9H0H0 1204 aaKnown RBP13.61□□□□□ -0.23
SDHA-216ENST00000514027 PCIF1Q9H4Z3 704 aa13.61□□□□□ -0.23
SDHA-216ENST00000514027 HOMER2Q9NSB8 354 aa13.61□□□□□ -0.23
SDHA-216ENST00000514027 FEM1BQ9UK73 627 aa13.61□□□□□ -0.23
SDHA-216ENST00000514027 GRIN2DO15399 1336 aa13.61□□□□□ -0.23
SDHA-216ENST00000514027 LRRN2O75325 713 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 ZNF131P52739 623 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 GALCP54803 685 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 PPFIA1Q13136 1202 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 TBC1D10BQ4KMP7 808 aaPredicted RBP13.6□□□□□ -0.23
SDHA-216ENST00000514027 CPXCR1Q8N123 301 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 HOOK2Q96ED9 719 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 SH2D3AQ9BRG2 576 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 MXRA8Q9BRK3 442 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 MKNK1Q9BUB5 465 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 KLC4Q9NSK0 619 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 NOC2LQ9Y3T9 749 aaKnown RBP13.6□□□□□ -0.23
SDHA-216ENST00000514027 UBE4BO95155 1302 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 PGRMC1O00264 195 aaKnown RBP13.6□□□□□ -0.23
SDHA-216ENST00000514027 NFIBO00712 420 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 KIAA0754O94854 1291 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 KRT14P02533 472 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 ITGB5P18084 799 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 CAP2P40123 477 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 CEP85LQ5SZL2 805 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 CFAP58Q5T655 872 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 ALS2CLQ60I27 953 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 PADI6Q6TGC4 694 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 METTL13Q8N6R0 699 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 IL31RAQ8NI17 732 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 LMBR1Q8WVP7 490 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 PBKQ96KB5 322 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 ZNF341Q9BYN7 854 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 OSGEPQ9NPF4 335 aa13.6□□□□□ -0.23
SDHA-216ENST00000514027 RGS17Q9UGC6 210 aaPredicted RBP13.6□□□□□ -0.23
SDHA-216ENST00000514027 TISP43B9A030 160 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 ANXA13P27216 316 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 RXRBP28702 533 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 GCKP35557 465 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 RWDD2BP57060 319 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 BFSP1Q12934 665 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 NNTQ13423 1086 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 NFIL3Q16649 462 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 TTMPQ5BVD1 217 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 KCTD16Q68DU8 428 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 ARL8AQ96BM9 186 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 SH3GL2Q99962 352 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 STK33Q9BYT3 514 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 RABEP2Q9H5N1 569 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 KCNH7Q9NS40 1196 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 KCND2Q9NZV8 630 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 APEX2Q9UBZ4 518 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 CES2O00748 559 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 KRT13P13646 458 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 LMNB1P20700 586 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 TNIP1Q15025 636 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 SYCE1Q8N0S2 351 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 DAW1Q8N136 415 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 DDX47Q9H0S4 455 aaKnown RBP13.59□□□□□ -0.23
SDHA-216ENST00000514027 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.59□□□□□ -0.234e-6■■■■■ 74.5
SDHA-216ENST00000514027 COL20A1Q9P218 1284 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 NENFQ9UMX5 172 aa13.59□□□□□ -0.23
SDHA-216ENST00000514027 PSME4Q14997 1843 aa13.58□□□□□ -0.23
SDHA-216ENST00000514027 IGSF9BQ9UPX0 1349 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 KRIT1O00522 736 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 ALAS1P13196 640 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 MUTP22033 750 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 DLG4P78352 724 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 MAPK7Q13164 816 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 DGKZQ13574 1117 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 B4GALNT4Q76KP1 1039 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 SH2D3CQ8N5H7 860 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 CTNNBL1Q8WYA6 563 aaPredicted RBP13.58□□□□□ -0.24
SDHA-216ENST00000514027 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.58□□□□□ -0.243e-7■■■■□ 19.3
SDHA-216ENST00000514027 CAPS2Q9BXY5 557 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 DMAC2Q9NW81 257 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 DDX20Q9UHI6 824 aaKnown RBP13.58□□□□□ -0.24
SDHA-216ENST00000514027 COL4A5P29400 1685 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 A0A0A6YYK5 440 aaPredicted RBP13.58□□□□□ -0.24
SDHA-216ENST00000514027 TMEM150BA6NC51 233 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 MEFVO15553 781 aaPredicted RBP13.58□□□□□ -0.24
SDHA-216ENST00000514027 CAND2O75155 1236 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 RASSF9O75901 435 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 ICAM1P05362 532 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 SMTNP53814 917 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 ERVK-9P63128 1117 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 GNGT1P63211 74 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 ACTN3Q08043 901 aaPredicted RBP13.58□□□□□ -0.24
SDHA-216ENST00000514027 TLDC1Q6P9B6 456 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 NT5DC3Q86UY8 548 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 SPATS2Q86XZ4 545 aaKnown RBP13.58□□□□□ -0.24
SDHA-216ENST00000514027 TTLL6Q8N841 843 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 SLC35G2Q8TBE7 412 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 ACTRT1Q8TDG2 376 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 MICAL1Q8TDZ2 1067 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 THOC1Q96FV9 657 aaKnown RBP13.58□□□□□ -0.24
SDHA-216ENST00000514027 GMLQ99445 158 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 RIT2Q99578 217 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 GPR88Q9GZN0 384 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms