RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 PHKBQ93100 1093 aa8.86□□□□□ -0.99
DEPDC1B-205ENST00000512078 GPRASP2Q96D09 838 aa8.86□□□□□ -0.99
DEPDC1B-205ENST00000512078 BBC3Q96PG8 261 aaPredicted RBP8.86□□□□□ -0.99
DEPDC1B-205ENST00000512078 PIDD1Q9HB75 910 aa8.86□□□□□ -0.99
DEPDC1B-205ENST00000512078 GPSM3Q9Y4H4 160 aa8.86□□□□□ -0.99
DEPDC1B-205ENST00000512078 PCNX2A6NKB5 2137 aa8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 EML5Q05BV3 1969 aa8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 NUP205Q92621 2012 aa8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 TRIM6-TRIM34B2RNG4 842 aa8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 GIPC1O14908 333 aa8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 GLUD1P00367 558 aa8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 ADH1AP07327 375 aa8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 PARP1P09874 1014 aaKnown RBP8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 PCP11498 1178 aaKnown RBP8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 ZSCAN20P17040 1043 aaPredicted RBP8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 SRSF5Q13243 272 aaKnown RBP8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 LURAP1LQ8IV03 231 aa8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 RNF169Q8NCN4 708 aa8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 CDHR1Q96JP9 859 aa8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 NT5C3AQ9H0P0 336 aa8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 AZI2Q9H6S1 392 aa8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 NRDE2Q9H7Z3 1164 aa8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 MRPL17Q9NRX2 175 aaKnown RBP8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 ZDHHC7Q9NXF8 308 aa8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 CDH7Q9ULB5 785 aa8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 NEUROG3Q9Y4Z2 214 aa8.85□□□□□ -0.99
DEPDC1B-205ENST00000512078 SHROOM3Q8TF72 1996 aa8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 ASCC3Q8N3C0 2202 aaKnown RBP8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 A0A0U1RQF3 1178 aa8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 EPN2O95208 641 aa8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 C1RP00736 705 aa8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 SSBP05455 408 aaKnown RBP eCLIP8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 KLRC1P26715 233 aa8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 TRAF1Q13077 416 aa8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 KIZQ2M2Z5 673 aa8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 VPS53Q5VIR6 699 aa8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 PLPPR4Q7Z2D5 763 aa8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 LONP2Q86WA8 852 aa8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 PROSER1Q86XN7 944 aa8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 LOXL4Q96JB6 756 aa8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 LRRCC1Q9C099 1032 aa8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 ARRDC1-AS1Q9H2J1 176 aa8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 KAT14Q9H8E8 782 aa8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 ASXL3Q9C0F0 2248 aa8.84□□□□□ -0.99
DEPDC1B-205ENST00000512078 COL1A2P08123 1366 aa8.84□□□□□ -1
DEPDC1B-205ENST00000512078 ZMYM6O95789 1325 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 EIF4E1BA6NMX2 242 aaKnown RBP8.83□□□□□ -1
DEPDC1B-205ENST00000512078 CHURC1-FNTBB4DL54 471 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 TEX28O15482 410 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 GPR32O75388 356 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 FSHRP23945 695 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 CXCL12P48061 93 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 SLC11A1P49279 550 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 FNTBP49356 437 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 SATB1Q01826 763 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 PLA2G2CQ5R387 149 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 RNF43Q68DV7 783 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 GLIS3Q8NEA6 775 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 RPS6KC1Q96S38 1066 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 PPP1R16BQ96T49 567 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 ZKSCAN3Q9BRR0 538 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 PHF20Q9BVI0 1012 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 PRKD2Q9BZL6 878 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 PLEKHA4Q9H4M7 779 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 TBC1D13Q9NVG8 400 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 DACH1Q9UI36 760 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 SSX2IPQ9Y2D8 614 aa8.83□□□□□ -1
DEPDC1B-205ENST00000512078 PAPSS2O95340 614 aaPredicted RBP8.82□□□□□ -1
DEPDC1B-205ENST00000512078 SOD2P04179 222 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 URODP06132 367 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 SLC26A2P50443 739 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 STAT5BP51692 787 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 COL28A1Q2UY09 1125 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 CCDC178Q5BJE1 867 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 TSHZ3Q63HK5 1081 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 C19orf48Q6RUI8 117 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 MFSD6Q6ZSS7 791 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 CEP68Q76N32 757 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 STAG2Q8N3U4 1231 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 GPATCH3Q96I76 525 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 HERC2P3Q9BVR0 1158 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 RXFP1Q9HBX9 757 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 JPH1Q9HDC5 661 aaPredicted RBP8.82□□□□□ -1
DEPDC1B-205ENST00000512078 HEBP1Q9NRV9 189 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 DNAJB4Q9UDY4 337 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 MSRB2Q9Y3D2 182 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 LAMA1P25391 3075 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 TDRD15B5MCY1 1934 aaKnown RBP8.82□□□□□ -1
DEPDC1B-205ENST00000512078 FREM2Q5SZK8 3169 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 MAN2B1O00754 1011 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 AXIN1O15169 862 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 SMARCA5O60264 1052 aaPredicted RBP8.82□□□□□ -1
DEPDC1B-205ENST00000512078 HBP1O60381 514 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 FGAP02671 866 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 CAPNS1P04632 268 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 MYBP10242 640 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 CEACAM1P13688 526 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 NT5C2P49902 561 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 AK2P54819 239 aa8.82□□□□□ -1
DEPDC1B-205ENST00000512078 SH3PXD2AQ5TCZ1 1133 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms