RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 PPP1R11O60927 126 aaPredicted RBP5.15□□□□□ -1.59
NIPBL-206ENST00000509429 MTRF1O75570 445 aaKnown RBP5.15□□□□□ -1.59
NIPBL-206ENST00000509429 MYCLP1P12525 358 aaPredicted RBP5.15□□□□□ -1.59
NIPBL-206ENST00000509429 ATF3P18847 181 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 CCNCP24863 283 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 ZNF76P36508 570 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 NSUN2Q08J23 767 aaKnown RBP eCLIP5.15□□□□□ -1.59
NIPBL-206ENST00000509429 TRAF1Q13077 416 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 SERINC3Q13530 473 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 SMC1AQ14683 1233 aaKnown RBP5.15□□□□□ -1.59
NIPBL-206ENST00000509429 CCDC178Q5BJE1 867 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 ARMC4Q5T2S8 1044 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 ANO1Q5XXA6 986 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 PPP4R3AQ6IN85 833 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 CFAP161Q6P656 301 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 KCNV1Q6PIU1 500 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 MAMDC4Q6UXC1 1216 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 CYP26C1Q6V0L0 522 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 RASGRP2Q7LDG7 609 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 RALYLQ86SE5 291 aaKnown RBP5.15□□□□□ -1.59
NIPBL-206ENST00000509429 MCF2L2Q86YR7 1114 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 LRRC49Q8IUZ0 686 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 ANKRD18AQ8IVF6 992 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 CCDC144CPQ8IYA2 1237 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 IFNL2Q8IZJ0 200 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 OR8H2Q8N162 312 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 ZNF713Q8N859 430 aaPredicted RBP5.15□□□□□ -1.59
NIPBL-206ENST00000509429 TRIML1Q8N9V2 468 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 NACC2Q96BF6 587 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 ZBTB9Q96C00 473 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 CEP95Q96GE4 821 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 ASB16Q96NS5 453 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 CLIC6Q96NY7 704 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 FCRL3Q96P31 734 aaPredicted RBP5.15□□□□□ -1.59
NIPBL-206ENST00000509429 GBP4Q96PP9 640 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 BAG1Q99933 345 aaPredicted RBP5.15□□□□□ -1.59
NIPBL-206ENST00000509429 UNC45AQ9H3U1 944 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 PRKRIP1Q9H875 184 aaPredicted RBP5.15□□□□□ -1.59
NIPBL-206ENST00000509429 PLEKHA5Q9HAU0 1116 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 METTL5Q9NRN9 209 aaKnown RBP5.15□□□□□ -1.59
NIPBL-206ENST00000509429 PDRG1Q9NUG6 133 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 ZNHIT6Q9NWK9 470 aaKnown RBP5.15□□□□□ -1.59
NIPBL-206ENST00000509429 SLC30A1Q9Y6M5 507 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 TOP2BQ02880 1626 aa5.15□□□□□ -1.59
NIPBL-206ENST00000509429 A0A0B4J203 849 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 A6NCN8 305 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 H0Y8X5 98 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 STXBP3O00186 592 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 RAD17O75943 681 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 CDKL5O76039 1030 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 RHOBTB3O94955 611 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 SCGB1D2O95969 90 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 F13A1P00488 732 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 FGRP09769 529 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 HARSP12081 509 aaKnown RBP5.14□□□□□ -1.59
NIPBL-206ENST00000509429 IMPDH2P12268 514 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 GLULP15104 373 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 ATF7P17544 494 aaPredicted RBP5.14□□□□□ -1.59
NIPBL-206ENST00000509429 KCNA6P17658 529 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 BTF3P20290 206 aaKnown RBP5.14□□□□□ -1.59
NIPBL-206ENST00000509429 ADD2P35612 726 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 CCNFP41002 786 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 CDKN1CP49918 316 aaPredicted RBP5.14□□□□□ -1.59
NIPBL-206ENST00000509429 EPHB1P54762 984 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 KIF22Q14807 665 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 GRM7Q14831 915 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 LRRC41Q15345 812 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 PUM3Q15397 648 aaKnown RBP5.14□□□□□ -1.59
NIPBL-206ENST00000509429 ZC3H12BQ5HYM0 836 aaKnown RBP5.14□□□□□ -1.59
NIPBL-206ENST00000509429 IRGCQ6NXR0 463 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 FIP1L1Q6UN15 594 aaKnown RBP5.14□□□□□ -1.59
NIPBL-206ENST00000509429 GRASPQ7Z6J2 395 aaPredicted RBP5.14□□□□□ -1.59
NIPBL-206ENST00000509429 RBM12BQ8IXT5 1001 aaKnown RBP5.14□□□□□ -1.59
NIPBL-206ENST00000509429 ANKRD42Q8N9B4 389 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 TMEM87AQ8NBN3 555 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 GPR150Q8NGU9 434 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 ANKRD49Q8WVL7 239 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 RTF1Q92541 710 aaKnown RBP5.14□□□□□ -1.59
NIPBL-206ENST00000509429 RNF34Q969K3 372 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 DHRS1Q96LJ7 313 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 ZSWIM3Q96MP5 696 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 TIGD1Q96MW7 591 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 BBC3Q96PG8 261 aaPredicted RBP5.14□□□□□ -1.59
NIPBL-206ENST00000509429 NACA2Q9H009 215 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 IRAK4Q9NWZ3 460 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 EPS15L1Q9UBC2 864 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 KIF3AQ9Y496 699 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 SNX5Q9Y5X3 404 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 PRDM2Q13029 1718 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 CLIP1P30622 1438 aa5.14□□□□□ -1.59
NIPBL-206ENST00000509429 CCDC66A2RUB6 948 aa5.13□□□□□ -1.59
NIPBL-206ENST00000509429 AKR1B10O60218 316 aa5.13□□□□□ -1.59
NIPBL-206ENST00000509429 CLASP2O75122 1294 aaKnown RBP5.13□□□□□ -1.59
NIPBL-206ENST00000509429 CDC45O75419 566 aa5.13□□□□□ -1.59
NIPBL-206ENST00000509429 ARIH2O95376 493 aa5.13□□□□□ -1.59
NIPBL-206ENST00000509429 NTRK1P04629 796 aa5.13□□□□□ -1.59
NIPBL-206ENST00000509429 PROZP22891 400 aa5.13□□□□□ -1.59
NIPBL-206ENST00000509429 MAPK8P45983 427 aa5.13□□□□□ -1.59
NIPBL-206ENST00000509429 GSCP56915 257 aaPredicted RBP5.13□□□□□ -1.59
NIPBL-206ENST00000509429 TTC31Q49AM3 519 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms