RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 DIS3L2Q8IYB7 885 aaKnown RBP12.22□□□□□ -0.45
RNF4-212ENST00000509258 NLRP7Q8WX94 980 aa12.22□□□□□ -0.45
RNF4-212ENST00000509258 RSPH1Q8WYR4 309 aa12.22□□□□□ -0.45
RNF4-212ENST00000509258 FAM20AQ96MK3 541 aa12.22□□□□□ -0.45
RNF4-212ENST00000509258 ZNF558Q96NG5 402 aa12.22□□□□□ -0.45
RNF4-212ENST00000509258 LXNQ9BS40 222 aa12.22□□□□□ -0.45
RNF4-212ENST00000509258 MINDY3Q9H8M7 445 aa12.22□□□□□ -0.45
RNF4-212ENST00000509258 CYP26B1Q9NR63 512 aa12.22□□□□□ -0.45
RNF4-212ENST00000509258 SUCLA2Q9P2R7 463 aaPredicted RBP12.22□□□□□ -0.45
RNF4-212ENST00000509258 B4GALT3O60512 393 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 HOXB8P17481 243 aaPredicted RBP12.21□□□□□ -0.45
RNF4-212ENST00000509258 TECP42680 631 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 PTPN5P54829 565 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 KRT17Q04695 432 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 SIGLEC14Q08ET2 396 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 KCNC3Q14003 757 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 EPHA7Q15375 998 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 LONRF3Q496Y0 759 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 ANKRD54Q6NXT1 300 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 KCNT2Q6UVM3 1135 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 RHPN2Q8IUC4 686 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 FBXL6Q8N531 539 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 LPPQ93052 612 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 TMEM143Q96AN5 459 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 DHX33Q9H6R0 707 aaKnown RBP12.21□□□□□ -0.45
RNF4-212ENST00000509258 IFT122Q9HBG6 1241 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 XPNPEP1Q9NQW7 623 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 DACT1Q9NYF0 836 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 MYO10Q9HD67 2058 aa12.21□□□□□ -0.45
RNF4-212ENST00000509258 CACNA1HO95180 2353 aa12.2□□□□□ -0.46
RNF4-212ENST00000509258 TBX3O15119 743 aa12.2□□□□□ -0.46
RNF4-212ENST00000509258 SLITRK3O94933 977 aa12.2□□□□□ -0.46
RNF4-212ENST00000509258 P4HBP07237 508 aaKnown RBP12.2□□□□□ -0.46
RNF4-212ENST00000509258 DNM2P50570 870 aa12.2□□□□□ -0.46
RNF4-212ENST00000509258 PTPN21Q16825 1174 aa12.2□□□□□ -0.46
RNF4-212ENST00000509258 TMC7Q7Z402 723 aa12.2□□□□□ -0.46
RNF4-212ENST00000509258 RNF169Q8NCN4 708 aa12.2□□□□□ -0.46
RNF4-212ENST00000509258 PRSS33Q8NF86 280 aa12.2□□□□□ -0.46
RNF4-212ENST00000509258 HELQQ8TDG4 1101 aa12.2□□□□□ -0.46
RNF4-212ENST00000509258 NLRP4Q96MN2 994 aa12.2□□□□□ -0.46
RNF4-212ENST00000509258 MTMR9Q96QG7 549 aa12.2□□□□□ -0.46
RNF4-212ENST00000509258 JPH2Q9BR39 696 aaPredicted RBP12.2□□□□□ -0.46
RNF4-212ENST00000509258 MRPL9Q9BYD2 267 aaKnown RBP12.2□□□□□ -0.46
RNF4-212ENST00000509258 INO80BQ9C086 356 aaPredicted RBP12.2□□□□□ -0.46
RNF4-212ENST00000509258 SPG21Q9NZD8 308 aa12.2□□□□□ -0.46
RNF4-212ENST00000509258 PLXNA3P51805 1871 aa12.2□□□□□ -0.46
RNF4-212ENST00000509258 C2orf16Q68DN1 1984 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 A0A0U1RQF3 1178 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 POTEMA6NI47 508 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 HIDE1A8MVS5 230 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 DKC1O60832 514 aaKnown RBP eCLIP12.19□□□□□ -0.46
RNF4-212ENST00000509258 SKIP12755 728 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 XBP1P17861 261 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 YWHABP31946 246 aaKnown RBP12.19□□□□□ -0.46
RNF4-212ENST00000509258 AFF1P51825 1210 aaKnown RBP12.19□□□□□ -0.46
RNF4-212ENST00000509258 SMC1AQ14683 1233 aaKnown RBP12.19□□□□□ -0.46
RNF4-212ENST00000509258 EMC2Q15006 297 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 TPRNQ4KMQ1 711 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 LLGL2Q6P1M3 1020 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 SYCE2Q6PIF2 218 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 ZBTB33Q86T24 672 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 TMEM173Q86WV6 379 aaPredicted RBP12.19□□□□□ -0.46
RNF4-212ENST00000509258 C4orf19Q8IY42 314 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 PRPF31Q8WWY3 499 aaKnown RBP12.19□□□□□ -0.46
RNF4-212ENST00000509258 WASF1Q92558 559 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 CASP10Q92851 521 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 CEP170P1Q96L14 293 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 NECTIN4Q96NY8 510 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 EIF2AK1Q9BQI3 630 aaKnown RBP12.19□□□□□ -0.46
RNF4-212ENST00000509258 GCOM2Q9BZD3 368 aaPredicted RBP12.19□□□□□ -0.46
RNF4-212ENST00000509258 S1PR5Q9H228 398 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 LIMCH1Q9UPQ0 1083 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 MYH11P35749 1972 aa12.19□□□□□ -0.46
RNF4-212ENST00000509258 DOCK6Q96HP0 2047 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 CD2BP2O95400 341 aaKnown RBP12.18□□□□□ -0.46
RNF4-212ENST00000509258 EOMESO95936 686 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 ATP2B1P20020 1258 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 SFPQP23246 707 aaKnown RBP eCLIP12.18□□□□□ -0.46
RNF4-212ENST00000509258 TXKP42681 527 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 PHKA2P46019 1235 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 ALDH7A1P49419 539 aaKnown RBP12.18□□□□□ -0.46
RNF4-212ENST00000509258 LAMTOR4Q0VGL1 99 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 NBR1Q14596 966 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 CALCRLQ16602 461 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 XKR9Q5GH70 373 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 UBXN11Q5T124 520 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 IER5LQ5T953 404 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 CES5AQ6NT32 575 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 TPH2Q8IWU9 490 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 EXOC8Q8IYI6 725 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 SLC39A11Q8N1S5 342 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 TMEM87AQ8NBN3 555 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 ASAP3Q8TDY4 903 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 BCL7CQ8WUZ0 217 aaPredicted RBP12.18□□□□□ -0.46
RNF4-212ENST00000509258 ASIC4Q96FT7 647 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 HSD17B14Q9BPX1 270 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 TTC12Q9H892 705 aaPredicted RBP12.18□□□□□ -0.46
RNF4-212ENST00000509258 CHST12Q9NRB3 414 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 NR2E1Q9Y466 385 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 COL4A3BPQ9Y5P4 624 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms