RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 DYDC2Q96IM9 177 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 SIKE1Q9BRV8 207 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 PACSIN1Q9BY11 444 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 SYNCQ9H7C4 482 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 DISC1Q9NRI5 854 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 METTL5Q9NRN9 209 aaKnown RBP10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 STARD13Q9Y3M8 1113 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 ATP6V0A2Q9Y487 856 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 STK24Q9Y6E0 443 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 ATAD5Q96QE3 1844 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 PXDNQ92626 1479 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 KIF13BQ9NQT8 1826 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 DDX3XO00571 662 aaKnown RBP eCLIP10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 RIPK2O43353 540 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 TLR2O60603 784 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 NAT1P18440 290 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 STX2P32856 288 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 SERPINB8P50452 374 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 NEK3P51956 506 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 PTENP60484 403 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 DR1Q01658 176 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 KCTD19Q17RG1 926 aaPredicted RBP10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 ACSBG2Q5FVE4 666 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 SH3D19Q5HYK7 790 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 C10orf76Q5T2E6 689 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 KRT28Q7Z3Y7 464 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 CCDC82Q8N4S0 544 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 ESR2Q92731 530 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 DHRS1Q96LJ7 313 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 RNF26Q9BY78 433 aaPredicted RBP10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 PITPNM3Q9BZ71 974 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 NT5C3AQ9H0P0 336 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 SEMA4AQ9H3S1 761 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 TIMMDC1Q9NPL8 285 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 ARHGEF38Q9NXL2 777 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 CEP72Q9P209 647 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 R3HDM2Q9Y2K5 976 aaKnown RBP10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 TIAM2Q8IVF5 1701 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 TRPM3Q9HCF6 1732 aaPredicted RBP10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 PHRF1Q9P1Y6 1649 aaKnown RBP10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 ATRNO75882 1429 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 SIPA1L3O60292 1781 aaPredicted RBP10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 PIM1P11309 404 aaPredicted RBP10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 PORP16435 677 aaPredicted RBP10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 TAC1P20366 129 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 IL15P40933 162 aaPredicted RBP10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 RCAN1P53805 252 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 PLTPP55058 493 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 CDR2Q01850 454 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 TMEM53Q6P2H8 277 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 DSTYKQ6XUX3 929 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 CYP4X1Q8N118 509 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 FBXO25Q8TCJ0 367 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 TNFRSF25Q93038 417 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 STMN2Q93045 179 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 GFM2Q969S9 779 aaKnown RBP10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 NACA2Q9H009 215 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 KCNK9Q9NPC2 374 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 BTBD7Q9P203 1132 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 TTC7AQ9ULT0 858 aaPredicted RBP10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 EFR3BQ9Y2G0 817 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 MYH3P11055 1940 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 A0A087X0T9 212 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 HTR3EA5X5Y0 456 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 CBX6O95503 412 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 FAM228BP0C875 321 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 HARSP12081 509 aaKnown RBP10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 HOXC9P31274 260 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 DSG1Q02413 1049 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 STRN3Q13033 797 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 PDIA6Q15084 440 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 PKN1Q16512 942 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 NAALADL2Q58DX5 795 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 PHLDB3Q6NSJ2 640 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 CCDC65Q8IXS2 484 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 CMTR1Q8N1G2 835 aaKnown RBP10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 ABTB2Q8N961 1025 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 UHMK1Q8TAS1 419 aaKnown RBP10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 NMD3Q96D46 503 aaKnown RBP10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 SERPINB12Q96P63 405 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 MLXIPLQ9NP71 852 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 PFDN4Q9NQP4 134 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 SAR1AQ9NR31 198 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 TUBA8Q9NY65 449 aaPredicted RBP10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 MTRF1LQ9UGC7 380 aaKnown RBP10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 ANGPTL2Q9UKU9 493 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 STXBP5LQ9Y2K9 1186 aa10.75□□□□□ -0.69
PDGFRA-207ENST00000509092 PRAMEF22A3QJZ6 481 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 KIAA0391O15091 583 aaKnown RBP10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 GH1P01241 217 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 MYL6BP14649 208 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 TXKP42681 527 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 HDAC4P56524 1084 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 MAP3K10Q02779 954 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 DCTN2Q13561 401 aaKnown RBP10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 DHX34Q14147 1143 aaKnown RBP10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 ADRM1Q16186 407 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 CLPPQ16740 277 aaPredicted RBP10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 COBLL1Q53SF7 1204 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms