RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 MENTQ9BUN1 341 aa5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 MTFR1LQ9H019 292 aa5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 CHMP4BQ9H444 224 aaKnown RBP5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 MAN1C1Q9NR34 630 aa5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 SH3GLB2Q9NR46 395 aa5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 LRP2BPQ9P2M1 347 aa5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 FTSJ1Q9UET6 329 aa5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 FEZ2Q9UHY8 353 aaPredicted RBP5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 DNAJC8O75937 253 aaPredicted RBP5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 PF4V1P10720 104 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 HOXC12P31275 282 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 ADD2P35612 726 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 CCT5P48643 541 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 ZNF143P52747 638 aaPredicted RBP5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 AK2P54819 239 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 TMPRSS15P98073 1019 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 APBA1Q02410 837 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 WASHC5Q12768 1159 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 NFATC3Q12968 1075 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 SEPT2Q15019 361 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 DHCR24Q15392 516 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 SEPT7Q16181 437 aaKnown RBP5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 FAM209AQ5JX71 171 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 E4F1Q66K89 784 aaPredicted RBP5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 TRMT10BQ6PF06 316 aaKnown RBP5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 TEPPQ6URK8 271 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 NLRP10Q86W26 655 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 CCDC103Q8IW40 242 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 CBARPQ8N350 705 aaPredicted RBP5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 NKAIN3Q8N8D7 197 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 GIMAP8Q8ND71 665 aaPredicted RBP5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 RCBTB1Q8NDN9 531 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 TNIP3Q96KP6 325 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 INTS7Q9NVH2 962 aaKnown RBP5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 DTLQ9NZJ0 730 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 RCAN3Q9UKA8 241 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 PNMA8BQ9ULN7 279 aaPredicted RBP5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 ZNF652Q9Y2D9 606 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 TCAF1Q9Y4C2 921 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 PCDHA2Q9Y5H9 948 aa5.09□□□□□ -1.59
SMARCA5-202ENST00000508573 TCRBV5S2A0A599 114 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 NEMP1O14524 444 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 CLGNO14967 610 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 MEFVO15553 781 aaPredicted RBP5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 BRINP1O60477 761 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 ZNF623O75123 536 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 LRG1P02750 347 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 SNRPB2P08579 225 aaKnown RBP5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 GLULP15104 373 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 HOXC13P31276 330 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 ID4P47928 161 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 KCNJ6P48051 423 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 EPHB4P54760 987 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 LSAMPQ13449 338 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 TRIM14Q14142 442 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 NCAPHQ15003 741 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 CHRNA2Q15822 529 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 ABCB5Q2M3G0 1257 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 SLC10A6Q3KNW5 377 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 SV2CQ496J9 727 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 STEAP3Q658P3 488 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 FAM180BQ6P0A1 224 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 TMC5Q6UXY8 1006 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 SLC41A1Q8IVJ1 513 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 NDUFAF2Q8N183 169 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 PPM1KQ8N3J5 372 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 DNERQ8NFT8 737 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 TTC17Q96AE7 1141 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 CDHR1Q96JP9 859 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 MYD88Q99836 296 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 BARX1Q9HBU1 254 aaPredicted RBP5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 SMYD2Q9NRG4 433 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 SAP30BPQ9UHR5 308 aaKnown RBP5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 FBXL7Q9UJT9 491 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 ANKRD6Q9Y2G4 727 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 PCDHB4Q9Y5E5 795 aa5.08□□□□□ -1.6
SMARCA5-202ENST00000508573 A0A1B0GVC2 190 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 hCG_1642624A0A1W2PR95 340 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 FZD9O00144 591 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 TADA3O75528 432 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 NPTXRO95502 500 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 LCP1P13796 627 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 POU3F2P20265 443 aaPredicted RBP5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 CAPN3P20807 821 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 OAS2P29728 719 aaKnown RBP5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 MAPK9P45984 424 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 STT3AP46977 705 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 USP14P54578 494 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 ADCY1Q08828 1119 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 GTF2H3Q13889 308 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 SF1Q15637 639 aaKnown RBP5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 NBPF8Q3BBV2 869 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 SLFN13Q68D06 897 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 LMBRD2Q68DH5 695 aaPredicted RBP5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 HSCBQ8IWL3 235 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 KLHL36Q8N4N3 616 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 CPA6Q8N4T0 437 aa5.07□□□□□ -1.6
SMARCA5-202ENST00000508573 KREMEN2Q8NCW0 462 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms