RNA–Protein interactions for RNA: ENST00000508457.1

C4orf46-202, Transcript of chromosome 4 open reading frame 46, humanhuman

TSL 5 BASIC

Gene C4orf46, Length 3,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-202ENST00000508457 C5orf60A6NFR6 353 aa9.4□□□□□ -0.91
C4orf46-202ENST00000508457 IFIT3O14879 490 aaKnown RBP9.4□□□□□ -0.91
C4orf46-202ENST00000508457 ORC4O43929 436 aa9.4□□□□□ -0.91
C4orf46-202ENST00000508457 RRM1P23921 792 aa9.4□□□□□ -0.91
C4orf46-202ENST00000508457 ADORA1P30542 326 aa9.4□□□□□ -0.91
C4orf46-202ENST00000508457 IFIT5Q13325 482 aaKnown RBP9.4□□□□□ -0.91
C4orf46-202ENST00000508457 TRADDQ15628 312 aa9.4□□□□□ -0.91
C4orf46-202ENST00000508457 CNGA3Q16281 694 aa9.4□□□□□ -0.91
C4orf46-202ENST00000508457 PDCD4Q53EL6 469 aaKnown RBP9.4□□□□□ -0.91
C4orf46-202ENST00000508457 RSPH3Q86UC2 560 aa9.4□□□□□ -0.91
C4orf46-202ENST00000508457 SATL1Q86VE3 508 aa9.4□□□□□ -0.91
C4orf46-202ENST00000508457 NLRP10Q86W26 655 aa9.4□□□□□ -0.91
C4orf46-202ENST00000508457 ASAP3Q8TDY4 903 aa9.4□□□□□ -0.91
C4orf46-202ENST00000508457 TMEM237Q96Q45 408 aa9.4□□□□□ -0.91
C4orf46-202ENST00000508457 NUP88Q99567 741 aaPredicted RBP9.4□□□□□ -0.91
C4orf46-202ENST00000508457 ATP8A2Q9NTI2 1148 aa9.4□□□□□ -0.91
C4orf46-202ENST00000508457 TRNAU1APQ9NX07 287 aaKnown RBP9.4□□□□□ -0.91
C4orf46-202ENST00000508457 CYP39A1Q9NYL5 469 aa9.4□□□□□ -0.91
C4orf46-202ENST00000508457 SATB2Q9UPW6 733 aa9.4□□□□□ -0.91
C4orf46-202ENST00000508457 hCG_1642624A0A1W2PR95 340 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 CFAP69A5D8W1 941 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 H3BUI4 141 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 BBOX1O75936 387 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 ALDH2P05091 517 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 POLR3DP05423 398 aaPredicted RBP9.39□□□□□ -0.91
C4orf46-202ENST00000508457 CDK4P11802 303 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 COL6A1P12109 1028 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 ITGA6P23229 1130 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 ARL1P40616 181 aaPredicted RBP9.39□□□□□ -0.91
C4orf46-202ENST00000508457 PAFAH1B1P43034 410 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 CD300CQ08708 224 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 MYLK3Q32MK0 819 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 BBS9Q3SYG4 887 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 TMCO4Q5TGY1 634 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 UTS2BQ765I0 119 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 FASTKD5Q7L8L6 764 aaKnown RBP9.39□□□□□ -0.91
C4orf46-202ENST00000508457 MGARPQ8TDB4 240 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 CASKIN2Q8WXE0 1202 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 STARD8Q92502 1023 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 ZNF333Q96JL9 665 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 FSD1Q9BTV5 496 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 MTMR12Q9C0I1 747 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 C12orf4Q9NQ89 552 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 LARSQ9P2J5 1176 aaKnown RBP9.39□□□□□ -0.91
C4orf46-202ENST00000508457 RTCBQ9Y3I0 505 aaKnown RBP9.39□□□□□ -0.91
C4orf46-202ENST00000508457 MAP3K15Q6ZN16 1313 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.39□□□□□ -0.91
C4orf46-202ENST00000508457 TTI1O43156 1089 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 PGM3O95394 542 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 ZBED1O96006 694 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 GM2AP17900 193 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 STX17P56962 302 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 EN1Q05925 392 aaPredicted RBP9.39□□□□□ -0.91
C4orf46-202ENST00000508457 LRRC49Q8IUZ0 686 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 GPIHBP1Q8IV16 184 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.39□□□□□ -0.91
C4orf46-202ENST00000508457 LRRC43Q8N309 656 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 C12orf50Q8NA57 414 aaPredicted RBP9.39□□□□□ -0.91
C4orf46-202ENST00000508457 RNF169Q8NCN4 708 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 STKLD1Q8NE28 680 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 GSDMBQ8TAX9 411 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 GSDMAQ96QA5 445 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 CDCA7Q9BWT1 371 aaPredicted RBP9.39□□□□□ -0.91
C4orf46-202ENST00000508457 MTFR1LQ9H019 292 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 FAIMQ9NVQ4 179 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 DDX56Q9NY93 547 aaKnown RBP9.39□□□□□ -0.91
C4orf46-202ENST00000508457 TMCC3Q9ULS5 477 aa9.39□□□□□ -0.91
C4orf46-202ENST00000508457 ZSCAN5BA6NJL1 495 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 HEXIM1O94992 359 aaKnown RBP9.38□□□□□ -0.91
C4orf46-202ENST00000508457 ZKSCAN1P17029 563 aaPredicted RBP9.38□□□□□ -0.91
C4orf46-202ENST00000508457 MARCKSP29966 332 aaPredicted RBP9.38□□□□□ -0.91
C4orf46-202ENST00000508457 HOXD13P35453 343 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 SERPINB8P50452 374 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 PTPN12Q05209 780 aaKnown RBP9.38□□□□□ -0.91
C4orf46-202ENST00000508457 ARL13BQ3SXY8 428 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 ERFEQ4G0M1 354 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 TMEM259Q4ZIN3 620 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 MARK2Q7KZI7 788 aaKnown RBP9.38□□□□□ -0.91
C4orf46-202ENST00000508457 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.38□□□□□ -0.91
C4orf46-202ENST00000508457 PMEPA1Q969W9 287 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 KRT23Q9C075 422 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 TMBIM4Q9HC24 238 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 CCDC177Q9NQR7 707 aaPredicted RBP9.38□□□□□ -0.91
C4orf46-202ENST00000508457 SAP30BPQ9UHR5 308 aaKnown RBP9.38□□□□□ -0.91
C4orf46-202ENST00000508457 RCOR1Q9UKL0 485 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 HBS1LQ9Y450 684 aaKnown RBP9.38□□□□□ -0.91
C4orf46-202ENST00000508457 VHLP40337 213 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 DEPDC1Q5TB30 811 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 ZNF449Q6P9G9 518 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 RFX8Q6ZV50 586 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 FAM186BQ8IYM0 893 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 ST13P4Q8IZP2 240 aaPredicted RBP9.38□□□□□ -0.91
C4orf46-202ENST00000508457 NATD1Q8N6N6 113 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 GIPC2Q8TF65 315 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 CENPTQ96BT3 561 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 COQ7Q99807 217 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 XAB2Q9HCS7 855 aaKnown RBP9.38□□□□□ -0.91
C4orf46-202ENST00000508457 QPCTLQ9NXS2 382 aa9.38□□□□□ -0.91
C4orf46-202ENST00000508457 MAGEC2Q9UBF1 373 aaPredicted RBP9.38□□□□□ -0.91
C4orf46-202ENST00000508457 GTF3C4Q9UKN8 822 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms