RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 SCRN1Q12765 414 aa7.96□□□□□ -1.13
CLCN3-206ENST00000507875 CCDC92Q53HC0 331 aaPredicted RBP7.96□□□□□ -1.13
CLCN3-206ENST00000507875 ZC3H12AQ5D1E8 599 aaKnown RBP7.96□□□□□ -1.13
CLCN3-206ENST00000507875 ZNF227Q86WZ6 799 aa7.96□□□□□ -1.13
CLCN3-206ENST00000507875 APOBEC3FQ8IUX4 373 aaKnown RBP7.96□□□□□ -1.13
CLCN3-206ENST00000507875 NECAB1Q8N987 351 aa7.96□□□□□ -1.13
CLCN3-206ENST00000507875 PRMT6Q96LA8 375 aaPredicted RBP7.96□□□□□ -1.13
CLCN3-206ENST00000507875 TTC1Q99614 292 aa7.96□□□□□ -1.13
CLCN3-206ENST00000507875 NAP1L4Q99733 375 aaKnown RBP7.96□□□□□ -1.13
CLCN3-206ENST00000507875 LACRTQ9GZZ8 138 aa7.96□□□□□ -1.13
CLCN3-206ENST00000507875 IFT122Q9HBG6 1241 aa7.96□□□□□ -1.13
CLCN3-206ENST00000507875 CD248Q9HCU0 757 aa7.96□□□□□ -1.13
CLCN3-206ENST00000507875 LUC7LQ9NQ29 371 aaKnown RBP7.96□□□□□ -1.13
CLCN3-206ENST00000507875 PKD2L1Q9P0L9 805 aa7.96□□□□□ -1.13
CLCN3-206ENST00000507875 IGKV6D-41A0A0C4DH26 115 aa7.96□□□□□ -1.14
CLCN3-206ENST00000507875 RASSF10A6NK89 507 aa7.96□□□□□ -1.14
CLCN3-206ENST00000507875 GOLGA8AA7E2F4 631 aa7.96□□□□□ -1.14
CLCN3-206ENST00000507875 CPLX1O14810 134 aa7.96□□□□□ -1.14
CLCN3-206ENST00000507875 CYP2D6P10635 497 aa7.96□□□□□ -1.14
CLCN3-206ENST00000507875 TOP1P11387 765 aaKnown RBP7.96□□□□□ -1.14
CLCN3-206ENST00000507875 IFNAR1P17181 557 aa7.96□□□□□ -1.14
CLCN3-206ENST00000507875 ECE1P42892 770 aa7.96□□□□□ -1.14
CLCN3-206ENST00000507875 PLCD1P51178 756 aa7.96□□□□□ -1.14
CLCN3-206ENST00000507875 TFAP4Q01664 338 aa7.96□□□□□ -1.14
CLCN3-206ENST00000507875 POU5F1BQ06416 359 aa7.96□□□□□ -1.14
CLCN3-206ENST00000507875 CEP135Q66GS9 1140 aa7.96□□□□□ -1.14
CLCN3-206ENST00000507875 RCSD1Q6JBY9 416 aa7.96□□□□□ -1.14
CLCN3-206ENST00000507875 LYSMD3Q7Z3D4 306 aa7.96□□□□□ -1.14
CLCN3-206ENST00000507875 FAM43AQ8N2R8 423 aa7.96□□□□□ -1.14
CLCN3-206ENST00000507875 ENAHQ8N8S7 591 aaPredicted RBP7.96□□□□□ -1.14
CLCN3-206ENST00000507875 ANKRD42Q8N9B4 389 aa7.96□□□□□ -1.14
CLCN3-206ENST00000507875 NSUN7Q8NE18 718 aaKnown RBP7.96□□□□□ -1.14
CLCN3-206ENST00000507875 PPM1EQ8WY54 764 aa7.96□□□□□ -1.14
CLCN3-206ENST00000507875 WDR89Q96FK6 387 aaPredicted RBP7.96□□□□□ -1.14
CLCN3-206ENST00000507875 TCEANC2Q96MN5 208 aa7.96□□□□□ -1.14
CLCN3-206ENST00000507875 DDX4Q9NQI0 724 aaKnown RBP7.96□□□□□ -1.14
CLCN3-206ENST00000507875 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.96□□□□□ -1.14
CLCN3-206ENST00000507875 SAP30BPQ9UHR5 308 aaKnown RBP7.96□□□□□ -1.14
CLCN3-206ENST00000507875 CYP2D7A0A087X1C5 515 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 PMM2O15305 246 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 RFPL1O75677 317 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 TCEA3O75764 348 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 EPS15P42566 896 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 GMPSP49915 693 aaPredicted RBP7.95□□□□□ -1.14
CLCN3-206ENST00000507875 HTRA3P83110 453 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 PLAURQ03405 335 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 GRB10Q13322 594 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 PICALMQ13492 652 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 ATL3Q6DD88 541 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 CRACR2BQ8N4Y2 399 aaPredicted RBP7.95□□□□□ -1.14
CLCN3-206ENST00000507875 FAM184AQ8NB25 1140 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 NELL1Q92832 810 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 HPS1Q92902 700 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 ZSCAN16Q9H4T2 348 aaPredicted RBP7.95□□□□□ -1.14
CLCN3-206ENST00000507875 TDRD3Q9H7E2 651 aaKnown RBP7.95□□□□□ -1.14
CLCN3-206ENST00000507875 KAT14Q9H8E8 782 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 CNOT7Q9UIV1 285 aaKnown RBP7.95□□□□□ -1.14
CLCN3-206ENST00000507875 IPPQ9Y573 584 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 SOX18P35713 384 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 KCNC4Q03721 635 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 RPS26P11Q5JNZ5 115 aaPredicted RBP7.95□□□□□ -1.14
CLCN3-206ENST00000507875 ZCCHC8Q6NZY4 707 aaKnown RBP7.95□□□□□ -1.14
CLCN3-206ENST00000507875 NSMFQ6X4W1 530 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 TMEM179Q6ZVK1 233 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 TRIM22Q8IYM9 498 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 FANCBQ8NB91 859 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 CCDC47Q96A33 483 aaKnown RBP7.95□□□□□ -1.14
CLCN3-206ENST00000507875 DPH2Q9BQC3 489 aaPredicted RBP7.95□□□□□ -1.14
CLCN3-206ENST00000507875 RNF26Q9BY78 433 aaPredicted RBP7.95□□□□□ -1.14
CLCN3-206ENST00000507875 CRISPLD1Q9H336 500 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 NYAP2Q9P242 653 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 MTMR6Q9Y217 621 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 PCDHGB3Q9Y5G1 929 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 CNTNAP1P78357 1384 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 PASKQ96RG2 1323 aa7.95□□□□□ -1.14
CLCN3-206ENST00000507875 PRAMEF27A3QJZ7 478 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 DCDC2CA8MYV0 355 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 WNT10BO00744 389 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 SLC26A4O43511 780 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 RNASEH2AO75792 299 aaKnown RBP7.94□□□□□ -1.14
CLCN3-206ENST00000507875 FBXO21O94952 628 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 ITGBL1O95965 494 aaPredicted RBP7.94□□□□□ -1.14
CLCN3-206ENST00000507875 ASGR2P07307 311 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 PYGMP11217 842 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 SHMT1P34896 483 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 ADCYAP1R1P41586 468 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 SATB1Q01826 763 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 SPEM2Q0P670 501 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 MORC3Q14149 939 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 GRM4Q14833 912 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 DHCR24Q15392 516 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 PRSS53Q2L4Q9 553 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 PIK3R6Q5UE93 754 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 CHST3Q7LGC8 479 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 CTCFLQ8NI51 663 aaPredicted RBP7.94□□□□□ -1.14
CLCN3-206ENST00000507875 SLC6A18Q96N87 628 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 MRPL4Q9BYD3 311 aaKnown RBP7.94□□□□□ -1.14
CLCN3-206ENST00000507875 LRRC2Q9BYS8 371 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 PTPDC1A2A3K4 754 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 A6NNZ2 444 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms