RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 DDX11Q96FC9 970 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 RIOK1Q9BRS2 568 aaKnown RBP8.03□□□□□ -1.12
NR1I3-224ENST00000507215 ANTXR1Q9H6X2 564 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 PIH1D3Q9NQM4 214 aaKnown RBP8.03□□□□□ -1.12
NR1I3-224ENST00000507215 ATP8A2Q9NTI2 1148 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 MCM9Q9NXL9 1143 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 SYNPO2Q9UMS6 1093 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 NOP58Q9Y2X3 529 aaKnown RBP8.03□□□□□ -1.12
NR1I3-224ENST00000507215 XIRP2A4UGR9 3374 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 MYH8P13535 1937 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 PARP14Q460N5 1801 aa8.03□□□□□ -1.12
NR1I3-224ENST00000507215 PNMA6EA0A0J9YXQ4 647 aa8.02□□□□□ -1.13
NR1I3-224ENST00000507215 SURF6O75683 361 aaKnown RBP8.02□□□□□ -1.13
NR1I3-224ENST00000507215 SUPT20HL2P0C7V6 817 aa8.02□□□□□ -1.13
NR1I3-224ENST00000507215 SSTR4P31391 388 aa8.02□□□□□ -1.13
NR1I3-224ENST00000507215 OAZ1P54368 228 aa8.02□□□□□ -1.13
NR1I3-224ENST00000507215 HSP90AB4PQ58FF6 505 aa8.02□□□□□ -1.13
NR1I3-224ENST00000507215 SLC6A19Q695T7 634 aa8.02□□□□□ -1.13
NR1I3-224ENST00000507215 GK5Q6ZS86 529 aa8.02□□□□□ -1.13
NR1I3-224ENST00000507215 C16orf59Q7L2K0 433 aa8.02□□□□□ -1.13
NR1I3-224ENST00000507215 FAM181AQ8N9Y4 354 aa8.02□□□□□ -1.13
NR1I3-224ENST00000507215 MIPEPQ99797 713 aa8.02□□□□□ -1.13
NR1I3-224ENST00000507215 TGIF2Q9GZN2 237 aa8.02□□□□□ -1.13
NR1I3-224ENST00000507215 KCNH6Q9H252 994 aa8.02□□□□□ -1.13
NR1I3-224ENST00000507215 HIPK3Q9H422 1215 aa8.02□□□□□ -1.13
NR1I3-224ENST00000507215 EHMT1Q9H9B1 1298 aa8.02□□□□□ -1.13
NR1I3-224ENST00000507215 DBNLQ9UJU6 430 aaKnown RBP8.02□□□□□ -1.13
NR1I3-224ENST00000507215 ZHX1Q9UKY1 873 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-224ENST00000507215 ZNF214Q9UL59 606 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-224ENST00000507215 SLC4A7Q9Y6M7 1214 aa8.02□□□□□ -1.13
NR1I3-224ENST00000507215 MYO5AQ9Y4I1 1855 aaKnown RBP8.01□□□□□ -1.13
NR1I3-224ENST00000507215 DNAJC25-GNG10A0A024R161 153 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 KIF28PB7ZC32 967 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 ATE1O95260 518 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 CD4P01730 458 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 PGK2P07205 417 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 ACTN1P12814 892 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 RFC2P35250 354 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 CD97P48960 835 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 RARSP54136 660 aaKnown RBP8.01□□□□□ -1.13
NR1I3-224ENST00000507215 ACVR2BQ13705 512 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 SPICE1Q8N0Z3 855 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 PRPF38AQ8NAV1 312 aaKnown RBP8.01□□□□□ -1.13
NR1I3-224ENST00000507215 SLC43A3Q8NBI5 491 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 CHST13Q8NET6 341 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 PHOSPHO2Q8TCD6 241 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.01□□□□□ -1.13
NR1I3-224ENST00000507215 PPP1R13LQ8WUF5 828 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 SLC9A7Q96T83 725 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 SLF1Q9BQI6 1058 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 LRFN3Q9BTN0 628 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 LRRC4CQ9HCJ2 640 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 DCP1AQ9NPI6 582 aaPredicted RBP8.01□□□□□ -1.13
NR1I3-224ENST00000507215 KLHL3Q9UH77 587 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 Q9Y3F1 56 aa8.01□□□□□ -1.13
NR1I3-224ENST00000507215 CTDP1Q9Y5B0 961 aaPredicted RBP8.01□□□□□ -1.13
NR1I3-224ENST00000507215 COL11A1P12107 1806 aaPredicted RBP8.01□□□□□ -1.13
NR1I3-224ENST00000507215 SLC22A31A6NKX4 558 aa8□□□□□ -1.13
NR1I3-224ENST00000507215 ZBED4O75132 1171 aa8□□□□□ -1.13
NR1I3-224ENST00000507215 SNAI1O95863 264 aaPredicted RBP8□□□□□ -1.13
NR1I3-224ENST00000507215 FOSL1P15407 271 aa8□□□□□ -1.13
NR1I3-224ENST00000507215 ATP2A2P16615 1042 aaKnown RBP8□□□□□ -1.13
NR1I3-224ENST00000507215 TAL1P17542 331 aaPredicted RBP8□□□□□ -1.13
NR1I3-224ENST00000507215 ERCC5P28715 1186 aaPredicted RBP8□□□□□ -1.13
NR1I3-224ENST00000507215 MCM4P33991 863 aa8□□□□□ -1.13
NR1I3-224ENST00000507215 ATP8B2P98198 1209 aa8□□□□□ -1.13
NR1I3-224ENST00000507215 MSMPQ1L6U9 139 aa8□□□□□ -1.13
NR1I3-224ENST00000507215 CCDC144BQ3MJ40 725 aa8□□□□□ -1.13
NR1I3-224ENST00000507215 TMEM67Q5HYA8 995 aa8□□□□□ -1.13
NR1I3-224ENST00000507215 SLC9C2Q5TAH2 1124 aa8□□□□□ -1.13
NR1I3-224ENST00000507215 SNRNP48Q6IEG0 339 aaKnown RBP8□□□□□ -1.13
NR1I3-224ENST00000507215 MFSD2AQ8NA29 543 aa8□□□□□ -1.13
NR1I3-224ENST00000507215 FAM13CQ8NE31 585 aa8□□□□□ -1.13
NR1I3-224ENST00000507215 GIMAP7Q8NHV1 300 aa8□□□□□ -1.13
NR1I3-224ENST00000507215 DDX24Q9GZR7 859 aaKnown RBP eCLIP8□□□□□ -1.13
NR1I3-224ENST00000507215 NKX2-4Q9H2Z4 354 aa8□□□□□ -1.13
NR1I3-224ENST00000507215 ZNF287Q9HBT7 754 aa8□□□□□ -1.13
NR1I3-224ENST00000507215 LMCD1Q9NZU5 365 aa8□□□□□ -1.13
NR1I3-224ENST00000507215 ZC3H7BQ9UGR2 993 aaKnown RBP8□□□□□ -1.13
NR1I3-224ENST00000507215 PRRC2BQ5JSZ5 2229 aaKnown RBP7.99□□□□□ -1.13
NR1I3-224ENST00000507215 LOC102724159A0A0B4J2E5 919 aa7.99□□□□□ -1.13
NR1I3-224ENST00000507215 ASB14A6NK59 587 aa7.99□□□□□ -1.13
NR1I3-224ENST00000507215 GRXCR1A8MXD5 290 aa7.99□□□□□ -1.13
NR1I3-224ENST00000507215 PRR33A8MZF0 331 aa7.99□□□□□ -1.13
NR1I3-224ENST00000507215 CYP26A1O43174 497 aa7.99□□□□□ -1.13
NR1I3-224ENST00000507215 ACRP10323 421 aa7.99□□□□□ -1.13
NR1I3-224ENST00000507215 TRIM27P14373 513 aa7.99□□□□□ -1.13
NR1I3-224ENST00000507215 PDE6AP16499 860 aa7.99□□□□□ -1.13
NR1I3-224ENST00000507215 OXCT1P55809 520 aa7.99□□□□□ -1.13
NR1I3-224ENST00000507215 CYP27A1Q02318 531 aa7.99□□□□□ -1.13
NR1I3-224ENST00000507215 ITGA7Q13683 1181 aa7.99□□□□□ -1.13
NR1I3-224ENST00000507215 PWP2Q15269 919 aaKnown RBP7.99□□□□□ -1.13
NR1I3-224ENST00000507215 CYP27C1Q4G0S4 372 aa7.99□□□□□ -1.13
NR1I3-224ENST00000507215 LETMD1Q6P1Q0 360 aa7.99□□□□□ -1.13
NR1I3-224ENST00000507215 C16orf86Q6ZW13 317 aa7.99□□□□□ -1.13
NR1I3-224ENST00000507215 CDH24Q86UP0 819 aa7.99□□□□□ -1.13
NR1I3-224ENST00000507215 SIAH1Q8IUQ4 282 aa7.99□□□□□ -1.13
NR1I3-224ENST00000507215 REXO1Q8N1G1 1221 aaKnown RBP7.99□□□□□ -1.13
NR1I3-224ENST00000507215 ANKRD35Q8N283 1001 aa7.99□□□□□ -1.13
NR1I3-224ENST00000507215 REPS2Q8NFH8 660 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms