RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 USP49Q70CQ1 688 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 MAATS1Q7Z4T9 603 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 FBXO33Q7Z6M2 555 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 TXNRD3Q86VQ6 643 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 CCDC65Q8IXS2 484 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 SRBD1Q8N5C6 995 aaKnown RBP6.43□□□□□ -1.38
CLDND1-213ENST00000506927 SPATA4Q8NEY3 305 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 BCAS4Q8TDM0 211 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 ASAP3Q8TDY4 903 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 AENQ8WTP8 325 aaKnown RBP6.43□□□□□ -1.38
CLDND1-213ENST00000506927 MED15Q96RN5 788 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 SH3GL2Q99962 352 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 MXD3Q9BW11 206 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 BHLHE41Q9C0J9 482 aaPredicted RBP6.43□□□□□ -1.38
CLDND1-213ENST00000506927 ZMYND12Q9H0C1 365 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 BLZF1Q9H2G9 400 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 NDST4Q9H3R1 872 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 SH2D4AQ9H788 454 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 CEP72Q9P209 647 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 SOX13Q9UN79 622 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 NIP7Q9Y221 180 aaKnown RBP eCLIP6.43□□□□□ -1.38
CLDND1-213ENST00000506927 CCDC88AQ3V6T2 1871 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 CASZ1Q86V15 1759 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 A0A087X0B3 334 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 GOLGA6L10A0A0M3HER8 536 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 LRRIQ3A6PVS8 624 aaPredicted RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 METTL12A8MUP2 240 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 RBAK-RBAKDNI3L0D1 243 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 NDUFAB1O14561 156 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 FANCGO15287 622 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 PRKAB2O43741 272 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 CCNT1O60563 726 aaKnown RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 PRPF6O94906 941 aaKnown RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 PLEKHA8P1O95397 391 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 SYF2O95926 243 aaKnown RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 ATP1A1P05023 1023 aaKnown RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 RPL13P26373 211 aaKnown RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 CD68P34810 354 aaPredicted RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 IREB2P48200 963 aaKnown RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 IRAK1P51617 712 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 KIF11P52732 1056 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 MRPL12P52815 198 aaKnown RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 NAPAP54920 295 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 EIF3BP55884 814 aaKnown RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 HERVK_113P62684 666 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 TFAP4Q01664 338 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 SUSD4Q5VX71 490 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 STXBP4Q6ZWJ1 553 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 BRINP3Q76B58 766 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 SND1Q7KZF4 910 aaKnown RBP eCLIP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 HEATR3Q7Z4Q2 680 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 C2CD5Q86YS7 1000 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 SMYD4Q8IYR2 804 aaPredicted RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 MYOCDQ8IZQ8 938 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 C4orf32Q8N8J7 132 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 NOA1Q8NC60 698 aaKnown RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 ERMNQ8TAM6 284 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 SDR42E1Q8WUS8 393 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 WFDC12Q8WWY7 111 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 BSNDQ8WZ55 320 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 ALKBH8Q96BT7 664 aaKnown RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 RUNDC3BQ96NL0 473 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 OSBPL9Q96SU4 736 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 MMS19Q96T76 1030 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 CHP1Q99653 195 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 PAGR1Q9BTK6 254 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 FAM129AQ9BZQ8 928 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 TRIM9Q9C026 710 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 TTYH3Q9C0H2 523 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 MRPL18Q9H0U6 180 aaKnown RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 MMRN2Q9H8L6 949 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 CNOT10Q9H9A5 744 aaKnown RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 METTL14Q9HCE5 456 aaKnown RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 DCP1AQ9NPI6 582 aaPredicted RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 PLCB1Q9NQ66 1216 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 TPSG1Q9NRR2 321 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 GEMIN8Q9NWZ8 242 aaKnown RBP6.42□□□□□ -1.38
CLDND1-213ENST00000506927 KCNK4Q9NYG8 393 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 LRWD1Q9UFC0 647 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 INTUQ9ULD6 942 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 PCDHA6Q9UN73 950 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 LEMD3Q9Y2U8 911 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 PCDHA8Q9Y5H6 950 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 MYH13Q9UKX3 1938 aa6.42□□□□□ -1.38
CLDND1-213ENST00000506927 LAMB1P07942 1786 aa6.41□□□□□ -1.38
CLDND1-213ENST00000506927 COL14A1Q05707 1796 aaKnown RBP6.41□□□□□ -1.38
CLDND1-213ENST00000506927 MAST2Q6P0Q8 1798 aa6.41□□□□□ -1.38
CLDND1-213ENST00000506927 ITGB4P16144 1822 aa6.41□□□□□ -1.38
CLDND1-213ENST00000506927 CICQ96RK0 1608 aaPredicted RBP6.41□□□□□ -1.38
CLDND1-213ENST00000506927 MACROD2A1Z1Q3 448 aa6.41□□□□□ -1.38
CLDND1-213ENST00000506927 GCOM1H8Y6P7 765 aaPredicted RBP6.41□□□□□ -1.38
CLDND1-213ENST00000506927 CETN3O15182 167 aa6.41□□□□□ -1.38
CLDND1-213ENST00000506927 SART1O43290 800 aaKnown RBP6.41□□□□□ -1.38
CLDND1-213ENST00000506927 ADAM23O75077 832 aa6.41□□□□□ -1.38
CLDND1-213ENST00000506927 PRDM1O75626 825 aa6.41□□□□□ -1.38
CLDND1-213ENST00000506927 FLOT1O75955 427 aa6.41□□□□□ -1.38
CLDND1-213ENST00000506927 ALX3O95076 343 aa6.41□□□□□ -1.38
CLDND1-213ENST00000506927 LDHBP07195 334 aaKnown RBP6.41□□□□□ -1.38
CLDND1-213ENST00000506927 MYZAPP0CAP1 466 aa6.41□□□□□ -1.38
CLDND1-213ENST00000506927 HSPA6P17066 643 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms