RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 TMEM87AQ8NBN3 555 aa18.2■□□□□ 0.5
SNX2-205ENST00000506874 PRSS33Q8NF86 280 aa18.2■□□□□ 0.5
SNX2-205ENST00000506874 KIF2CQ99661 725 aa18.2■□□□□ 0.5
SNX2-205ENST00000506874 INO80BQ9C086 356 aaPredicted RBP18.2■□□□□ 0.5
SNX2-205ENST00000506874 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.19■□□□□ 0.5
SNX2-205ENST00000506874 WEE2P0C1S8 567 aa18.19■□□□□ 0.5
SNX2-205ENST00000506874 RBM25P49756 843 aaKnown RBP18.19■□□□□ 0.5
SNX2-205ENST00000506874 NPEPPSP55786 919 aa18.19■□□□□ 0.5
SNX2-205ENST00000506874 BMS1Q14692 1282 aaKnown RBP18.19■□□□□ 0.5
SNX2-205ENST00000506874 PTPN21Q16825 1174 aa18.19■□□□□ 0.5
SNX2-205ENST00000506874 TPRNQ4KMQ1 711 aa18.19■□□□□ 0.5
SNX2-205ENST00000506874 GALNT17Q6IS24 598 aa18.19■□□□□ 0.5
SNX2-205ENST00000506874 CES5AQ6NT32 575 aa18.19■□□□□ 0.5
SNX2-205ENST00000506874 MOXD1Q6UVY6 613 aa18.19■□□□□ 0.5
SNX2-205ENST00000506874 KRT25Q7Z3Z0 450 aa18.19■□□□□ 0.5
SNX2-205ENST00000506874 FBXL6Q8N531 539 aa18.19■□□□□ 0.5
SNX2-205ENST00000506874 GBP3Q9H0R5 595 aa18.19■□□□□ 0.5
SNX2-205ENST00000506874 FAM105AQ9NUU6 356 aa18.19■□□□□ 0.5
SNX2-205ENST00000506874 CCDC194A0A1B0GVG4 234 aa18.18■□□□□ 0.5
SNX2-205ENST00000506874 PFKFB2O60825 505 aa18.18■□□□□ 0.5
SNX2-205ENST00000506874 SKIP12755 728 aa18.18■□□□□ 0.5
SNX2-205ENST00000506874 RNASELQ05823 741 aaKnown RBP18.18■□□□□ 0.5
SNX2-205ENST00000506874 SCRN1Q12765 414 aa18.18■□□□□ 0.5
SNX2-205ENST00000506874 NOMO2Q5JPE7 1267 aa18.18■□□□□ 0.5
SNX2-205ENST00000506874 RARS2Q5T160 578 aaKnown RBP18.18■□□□□ 0.5
SNX2-205ENST00000506874 GLB1LQ6UWU2 654 aa18.18■□□□□ 0.5
SNX2-205ENST00000506874 C12orf76Q8N812 135 aaPredicted RBP18.18■□□□□ 0.5
SNX2-205ENST00000506874 ZNF579Q8NAF0 562 aaKnown RBP18.18■□□□□ 0.5
SNX2-205ENST00000506874 PHOX2BQ99453 314 aa18.18■□□□□ 0.5
SNX2-205ENST00000506874 POMKQ9H5K3 350 aa18.18■□□□□ 0.5
SNX2-205ENST00000506874 NRDE2Q9H7Z3 1164 aa18.18■□□□□ 0.5
SNX2-205ENST00000506874 CYP26B1Q9NR63 512 aa18.18■□□□□ 0.5
SNX2-205ENST00000506874 BMP2KQ9NSY1 1161 aaPredicted RBP18.18■□□□□ 0.5
SNX2-205ENST00000506874 TBC1D13Q9NVG8 400 aa18.18■□□□□ 0.5
SNX2-205ENST00000506874 NR2E1Q9Y466 385 aa18.18■□□□□ 0.5
SNX2-205ENST00000506874 SRGAP2CP0DJJ0 459 aa18.17■□□□□ 0.5
SNX2-205ENST00000506874 QARSP47897 775 aaKnown RBP18.17■□□□□ 0.5
SNX2-205ENST00000506874 KANK3Q6NY19 840 aa18.17■□□□□ 0.5
SNX2-205ENST00000506874 TMEM143Q96AN5 459 aa18.17■□□□□ 0.5
SNX2-205ENST00000506874 ASIC4Q96FT7 647 aa18.17■□□□□ 0.5
SNX2-205ENST00000506874 IGSF21Q96ID5 467 aa18.17■□□□□ 0.5
SNX2-205ENST00000506874 CEP170P1Q96L14 293 aa18.17■□□□□ 0.5
SNX2-205ENST00000506874 JPH2Q9BR39 696 aaPredicted RBP18.17■□□□□ 0.5
SNX2-205ENST00000506874 ZBP1Q9H171 429 aa18.17■□□□□ 0.5
SNX2-205ENST00000506874 ADAM7Q9H2U9 754 aa18.17■□□□□ 0.5
SNX2-205ENST00000506874 UPF2Q9HAU5 1272 aaKnown RBP18.17■□□□□ 0.5
SNX2-205ENST00000506874 VAV3Q9UKW4 847 aa18.17■□□□□ 0.5
SNX2-205ENST00000506874 COL4A3BPQ9Y5P4 624 aa18.17■□□□□ 0.5
SNX2-205ENST00000506874 KMT2EQ8IZD2 1858 aa18.17■□□□□ 0.5
SNX2-205ENST00000506874 C2CD4DB7Z1M9 353 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 MARCH6O60337 910 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 OFD1O75665 1012 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 LARGE1O95461 756 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 GALTP07902 379 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 EPCAMP16422 314 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 RAB27AP51159 221 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 POLGP54098 1239 aaPredicted RBP18.16■□□□□ 0.5
SNX2-205ENST00000506874 VCPP55072 806 aaKnown RBP18.16■□□□□ 0.5
SNX2-205ENST00000506874 ITIH3Q06033 890 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 PPP2R5CQ13362 524 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 ME3Q16798 604 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 DDX53Q86TM3 631 aaKnown RBP18.16■□□□□ 0.5
SNX2-205ENST00000506874 NECAB1Q8N987 351 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 KREMEN2Q8NCW0 462 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 BCL7CQ8WUZ0 217 aaPredicted RBP18.16■□□□□ 0.5
SNX2-205ENST00000506874 SLC7A3Q8WY07 619 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 NECTIN4Q96NY8 510 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 TRAIPQ9BWF2 469 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 IFT122Q9HBG6 1241 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 GJB4Q9NTQ9 266 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 WRAP73Q9P2S5 460 aaPredicted RBP18.16■□□□□ 0.5
SNX2-205ENST00000506874 DNAJB4Q9UDY4 337 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 PCDHB2Q9Y5E7 798 aa18.16■□□□□ 0.5
SNX2-205ENST00000506874 CCNT1O60563 726 aaKnown RBP18.15■□□□□ 0.5
SNX2-205ENST00000506874 PDGFBP01127 241 aaPredicted RBP18.15■□□□□ 0.5
SNX2-205ENST00000506874 CTSAP10619 480 aa18.15■□□□□ 0.5
SNX2-205ENST00000506874 MTHFRP42898 656 aa18.15■□□□□ 0.5
SNX2-205ENST00000506874 SLC11A1P49279 550 aa18.15■□□□□ 0.5
SNX2-205ENST00000506874 PTPN5P54829 565 aa18.15■□□□□ 0.5
SNX2-205ENST00000506874 PIK3AP1Q6ZUJ8 805 aa18.15■□□□□ 0.5
SNX2-205ENST00000506874 NEK8Q86SG6 692 aa18.15■□□□□ 0.5
SNX2-205ENST00000506874 ZNF280BQ86YH2 543 aa18.15■□□□□ 0.5
SNX2-205ENST00000506874 FAM177A1Q8N128 213 aaPredicted RBP18.15■□□□□ 0.5
SNX2-205ENST00000506874 OXER1Q8TDS5 423 aa18.15■□□□□ 0.5
SNX2-205ENST00000506874 PRPF31Q8WWY3 499 aaKnown RBP18.15■□□□□ 0.5
SNX2-205ENST00000506874 PGBD4Q96DM1 585 aa18.15■□□□□ 0.5
SNX2-205ENST00000506874 FAM20AQ96MK3 541 aa18.15■□□□□ 0.5
SNX2-205ENST00000506874 PHF20Q9BVI0 1012 aa18.15■□□□□ 0.5
SNX2-205ENST00000506874 MINDY3Q9H8M7 445 aa18.15■□□□□ 0.5
SNX2-205ENST00000506874 KCNMB3Q9NPA1 279 aa18.15■□□□□ 0.5
SNX2-205ENST00000506874 AGPAT5Q9NUQ2 364 aa18.15■□□□□ 0.5
SNX2-205ENST00000506874 B4GALT3O60512 393 aa18.14■□□□□ 0.49
SNX2-205ENST00000506874 DKC1O60832 514 aaKnown RBP eCLIP18.14■□□□□ 0.49
SNX2-205ENST00000506874 ZNF623O75123 536 aa18.14■□□□□ 0.49
SNX2-205ENST00000506874 CDKL5O76039 1030 aa18.14■□□□□ 0.49
SNX2-205ENST00000506874 SSBP05455 408 aaKnown RBP eCLIP18.14■□□□□ 0.49
SNX2-205ENST00000506874 P4HBP07237 508 aaKnown RBP18.14■□□□□ 0.49
SNX2-205ENST00000506874 TCF15Q12870 199 aa18.14■□□□□ 0.49
SNX2-205ENST00000506874 NCAPH2Q6IBW4 605 aa18.14■□□□□ 0.49
SNX2-205ENST00000506874 AGMOQ6ZNB7 445 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms