RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 MTA3Q9BTC8 594 aa10.35□□□□□ -0.75
PHF3-208ENST00000506783 TAOK3Q9H2K8 898 aa10.35□□□□□ -0.75
PHF3-208ENST00000506783 KDM3AQ9Y4C1 1321 aa10.35□□□□□ -0.75
PHF3-208ENST00000506783 C10orf76Q5T2E6 689 aa10.35□□□□□ -0.75
PHF3-208ENST00000506783 C11orf70Q9BRQ4 267 aa10.35□□□□□ -0.75
PHF3-208ENST00000506783 FAM213AQ9BRX8 229 aa10.35□□□□□ -0.75
PHF3-208ENST00000506783 MRPL42Q9Y6G3 142 aaKnown RBP10.35□□□□□ -0.75
PHF3-208ENST00000506783 ABCC6O95255 1503 aa10.35□□□□□ -0.75
PHF3-208ENST00000506783 AKAP11Q9UKA4 1901 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 LRRIQ4A6NIV6 560 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 NFIBO00712 420 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 CD19P15391 556 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 KRT15P19012 456 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 COMTP21964 271 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 MDH1P40925 334 aaKnown RBP10.34□□□□□ -0.75
PHF3-208ENST00000506783 IRX4P78413 519 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 MTERF2Q49AM1 385 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 SLC10A5Q5PT55 438 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 APOBEC3HQ6NTF7 200 aaKnown RBP10.34□□□□□ -0.75
PHF3-208ENST00000506783 MICALCLQ6ZW33 695 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.34□□□□□ -0.753e-16■□□□□ 9.8
PHF3-208ENST00000506783 DDX23Q9BUQ8 820 aaKnown RBP10.34□□□□□ -0.75
PHF3-208ENST00000506783 INTS2Q9H0H0 1204 aaKnown RBP10.34□□□□□ -0.75
PHF3-208ENST00000506783 ANAPC7Q9UJX3 599 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 MEIS2O14770 477 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 CHN1P15882 459 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 MUM1L1Q5H9M0 696 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 GKAP1Q5VSY0 366 aaPredicted RBP10.34□□□□□ -0.75
PHF3-208ENST00000506783 BSPRYQ5W0U4 402 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 CCDC137Q6PK04 289 aaKnown RBP10.34□□□□□ -0.75
PHF3-208ENST00000506783 DLK2Q6UY11 383 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 EFCAB13Q8IY85 973 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 SLFN12Q8IYM2 578 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 SLC17A8Q8NDX2 589 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 MYCBPAPQ8TBZ2 947 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 FNBP1Q96RU3 617 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 COA1Q9GZY4 146 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 VPS37BQ9H9H4 285 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 SAMD15Q9P1V8 674 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 CNOT8Q9UFF9 292 aaKnown RBP10.34□□□□□ -0.75
PHF3-208ENST00000506783 L3MBTL1Q9Y468 752 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 FMO5P49326 533 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 MXI1P50539 228 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 FXR2P51116 673 aaKnown RBP eCLIP10.34□□□□□ -0.751e-15■■■□□ 14.9
PHF3-208ENST00000506783 ELOA2Q8IYF1 753 aaPredicted RBP10.34□□□□□ -0.75
PHF3-208ENST00000506783 MMGT1Q8N4V1 131 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 FAM167BQ9BTA0 163 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 RGS17Q9UGC6 210 aaPredicted RBP10.34□□□□□ -0.75
PHF3-208ENST00000506783 ATRNO75882 1429 aa10.34□□□□□ -0.75
PHF3-208ENST00000506783 M0R2N6 131 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 THAP12O43422 761 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 MYL1P05976 194 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 PDIA5Q14554 519 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 SGO2Q562F6 1265 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 ARHGEF19Q8IW93 802 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 ALG3Q92685 438 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 SLC35C1Q96A29 364 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 DNAJC18Q9H819 358 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 LAMA2P24043 3122 aaKnown RBP10.33□□□□□ -0.76
PHF3-208ENST00000506783 PPP4CP60510 307 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 TUBB4BP68371 445 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 CYFIP2Q96F07 1278 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 CEP170P1Q96L14 293 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 NUP85Q9BW27 656 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 SYNCQ9H7C4 482 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 SLC24A3Q9HC58 644 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 SPON1Q9HCB6 807 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 SAE1Q9UBE0 346 aaPredicted RBP10.33□□□□□ -0.76
PHF3-208ENST00000506783 MYH7P12883 1935 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 TARSL2A2RTX5 802 aaKnown RBP10.33□□□□□ -0.76
PHF3-208ENST00000506783 GMNCA6NCL1 334 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 ONECUT3O60422 494 aaPredicted RBP10.33□□□□□ -0.76
PHF3-208ENST00000506783 SPATA31C1P0DKV0 1188 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 KRT10P13645 584 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 MAP2K2P36507 400 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 PPP2R5DQ14738 602 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 TMED2Q15363 201 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 MEI1Q5TIA1 1274 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 RUFY4Q6ZNE9 571 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 ZNF365Q70YC5 407 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 RAPGEF5Q92565 580 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 CRAMP1Q96RY5 1269 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 LARSQ9P2J5 1176 aaKnown RBP10.33□□□□□ -0.76
PHF3-208ENST00000506783 WRAP73Q9P2S5 460 aaPredicted RBP10.33□□□□□ -0.76
PHF3-208ENST00000506783 NXF1Q9UBU9 619 aaKnown RBP10.33□□□□□ -0.76
PHF3-208ENST00000506783 ZNF148Q9UQR1 794 aa10.33□□□□□ -0.76
PHF3-208ENST00000506783 SCN11AQ9UI33 1791 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 LTBP4Q8N2S1 1624 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 EDIL3O43854 480 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 GNA14O95837 355 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 BCRP11274 1271 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 IGBP1P78318 339 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 MKRN3Q13064 507 aaKnown RBP10.32□□□□□ -0.76
PHF3-208ENST00000506783 ATP13A4Q4VNC1 1196 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 PHLDB3Q6NSJ2 640 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 SAMD7Q7Z3H4 446 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 IRF2BP2Q7Z5L9 587 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 C4orf33Q8N1A6 199 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 ARFGAP2Q8N6H7 521 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 IL31RAQ8NI17 732 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms