RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 HEATR3Q7Z4Q2 680 aa10.15□□□□□ -0.78
COPS4-204ENST00000506443 GPR149Q86SP6 731 aa10.15□□□□□ -0.78
COPS4-204ENST00000506443 CABP7Q86V35 215 aa10.15□□□□□ -0.78
COPS4-204ENST00000506443 TEX2Q8IWB9 1127 aa10.15□□□□□ -0.78
COPS4-204ENST00000506443 METTL13Q8N6R0 699 aa10.15□□□□□ -0.78
COPS4-204ENST00000506443 RUFY2Q8WXA3 655 aa10.15□□□□□ -0.78
COPS4-204ENST00000506443 TMEM87BQ96K49 555 aa10.15□□□□□ -0.78
COPS4-204ENST00000506443 RPP25Q9BUL9 199 aaKnown RBP10.15□□□□□ -0.78
COPS4-204ENST00000506443 GBP3Q9H0R5 595 aa10.15□□□□□ -0.78
COPS4-204ENST00000506443 ZNF302Q9NR11 478 aa10.15□□□□□ -0.78
COPS4-204ENST00000506443 USTQ9Y2C2 406 aa10.15□□□□□ -0.78
COPS4-204ENST00000506443 RBM8AQ9Y5S9 174 aaKnown RBP10.15□□□□□ -0.78
COPS4-204ENST00000506443 ZFYVE26Q68DK2 2539 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 CCDC69A6NI79 296 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 RIOK3O14730 519 aaKnown RBP10.14□□□□□ -0.79
COPS4-204ENST00000506443 CNPP09543 421 aaKnown RBP10.14□□□□□ -0.79
COPS4-204ENST00000506443 CALM1P0DP23 149 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 CALM2P0DP24 149 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 CALM3P0DP25 149 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 PRKCSHP14314 528 aaPredicted RBP10.14□□□□□ -0.79
COPS4-204ENST00000506443 SREBF1P36956 1147 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 ATXN1P54253 815 aaKnown RBP10.14□□□□□ -0.79
COPS4-204ENST00000506443 UGCGQ16739 394 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 FAM160B1Q5W0V3 765 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 PDXDC2PQ6P474 469 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 CASC1Q6TDU7 716 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 NFXL1Q6ZNB6 911 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 NIPA1Q7RTP0 329 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 SGMS1Q86VZ5 419 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 ZNF280BQ86YH2 543 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 ABI1Q8IZP0 508 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 EXOC6Q8TAG9 804 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 RUBCNQ92622 972 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 TMEM169Q96HH4 297 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 IGSF21Q96ID5 467 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 B3GALT6Q96L58 329 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 RTP3Q9BQQ7 232 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 SH2D3AQ9BRG2 576 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 LRRC2Q9BYS8 371 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 NRDE2Q9H7Z3 1164 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 SFXN1Q9H9B4 322 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 PARD6AQ9NPB6 346 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 MAN1C1Q9NR34 630 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 TBC1D13Q9NVG8 400 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 DZANK1Q9NVP4 752 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 MTF2Q9Y483 593 aaPredicted RBP10.14□□□□□ -0.79
COPS4-204ENST00000506443 IRAK3Q9Y616 596 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 FRYQ5TBA9 3013 aa10.14□□□□□ -0.79
COPS4-204ENST00000506443 ATRXP46100 2492 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 A0A0U1RQF3 1178 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 C2CD2LO14523 706 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 HOXA2O43364 376 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 CYP3A4P08684 503 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 SPATA31D3P0C874 917 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 CTSAP10619 480 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 EIF4BP23588 611 aaKnown RBP10.13□□□□□ -0.79
COPS4-204ENST00000506443 GBP2P32456 591 aaPredicted RBP10.13□□□□□ -0.79
COPS4-204ENST00000506443 CLCN4P51793 760 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 ST3GAL2Q16842 350 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 LETM2Q2VYF4 491 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 TSSK4Q6SA08 328 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 SPATA31D4Q6ZUB0 917 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 TAS1R1Q7RTX1 841 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 BBXQ8WY36 941 aaPredicted RBP10.13□□□□□ -0.79
COPS4-204ENST00000506443 GJA10Q969M2 543 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 KLHL5Q96PQ7 755 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 ANO3Q9BYT9 981 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 ARHGEF3Q9NR81 526 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 AKT3Q9Y243 479 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 SLC12A7Q9Y666 1083 aa10.13□□□□□ -0.79
COPS4-204ENST00000506443 V9GY48 417 aaPredicted RBP10.13□□□□□ -0.79
COPS4-204ENST00000506443 CLUHO75153 1309 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 CNTNAP5Q8WYK1 1306 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 SMCO2A6NFE2 343 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 IPO5O00410 1097 aaKnown RBP10.12□□□□□ -0.79
COPS4-204ENST00000506443 MAGEB2O15479 319 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 ZNF862O60290 1169 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 GALTP07902 379 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 NCLP19338 710 aaKnown RBP10.12□□□□□ -0.79
COPS4-204ENST00000506443 RFX1P22670 979 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 GPC3P51654 580 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 NAPAP54920 295 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 NECTIN1Q15223 517 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 LPAL2Q16609 132 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 EFCAB12Q6NXP0 572 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 PPP1R18Q6NYC8 613 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 MIS18BP1Q6P0N0 1132 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 GET4Q7L5D6 327 aaPredicted RBP10.12□□□□□ -0.79
COPS4-204ENST00000506443 OTOP3Q7RTS5 596 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 PLA2G4DQ86XP0 818 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 SLC44A3Q8N4M1 653 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 ZNF707Q96C28 371 aaPredicted RBP10.12□□□□□ -0.79
COPS4-204ENST00000506443 LSG1Q9H089 658 aaKnown RBP10.12□□□□□ -0.79
COPS4-204ENST00000506443 FAM217BQ9NTX9 383 aaPredicted RBP10.12□□□□□ -0.79
COPS4-204ENST00000506443 MARCH5Q9NX47 278 aa10.12□□□□□ -0.79
COPS4-204ENST00000506443 NOTCH4Q99466 2003 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 COL4A2P08572 1712 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.11□□□□□ -0.79
COPS4-204ENST00000506443 SLC27A2O14975 620 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 EDIL3O43854 480 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms