RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 MAFBQ9Y5Q3 323 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-213ENST00000505074 ZBTB42B2RXF5 422 aa18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 NT5C1B-RDH14C9J2C7 533 aa18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 CIITAP33076 1130 aa18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 TOB2Q14106 344 aaPredicted RBP18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 LRCH2Q5VUJ6 765 aa18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 GPR149Q86SP6 731 aa18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 TBCKQ8TEA7 893 aa18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 SLC22A17Q8WUG5 538 aa18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 RIN2Q8WYP3 895 aaPredicted RBP18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 TEKT3Q9BXF9 490 aa18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 MRPL9Q9BYD2 267 aaKnown RBP18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 ZBP1Q9H171 429 aa18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 SFXN1Q9H9B4 322 aa18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 ZSWIM6Q9HCJ5 1215 aa18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 SH3GLB2Q9NR46 395 aa18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 DISC1Q9NRI5 854 aa18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 WNT16Q9UBV4 365 aa18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 IRAK3Q9Y616 596 aa18.03■□□□□ 0.48
PDLIM7-213ENST00000505074 MSH4O15457 936 aa18.02■□□□□ 0.48
PDLIM7-213ENST00000505074 TMOD1P28289 359 aa18.02■□□□□ 0.48
PDLIM7-213ENST00000505074 BCAR1P56945 870 aa18.02■□□□□ 0.48
PDLIM7-213ENST00000505074 PRKCEQ02156 737 aa18.02■□□□□ 0.48
PDLIM7-213ENST00000505074 CLLU1OSQ5K130 101 aa18.02■□□□□ 0.48
PDLIM7-213ENST00000505074 EFCAB12Q6NXP0 572 aa18.02■□□□□ 0.48
PDLIM7-213ENST00000505074 PPFIBP1Q86W92 1011 aa18.02■□□□□ 0.48
PDLIM7-213ENST00000505074 LRRC71Q8N4P6 559 aa18.02■□□□□ 0.48
PDLIM7-213ENST00000505074 LENG9Q96B70 501 aa18.02■□□□□ 0.48
PDLIM7-213ENST00000505074 C22orf23Q9BZE7 217 aa18.02■□□□□ 0.48
PDLIM7-213ENST00000505074 NRBP2Q9NSY0 501 aa18.02■□□□□ 0.48
PDLIM7-213ENST00000505074 MAGEB2O15479 319 aa18.01■□□□□ 0.47
PDLIM7-213ENST00000505074 GPR32O75388 356 aa18.01■□□□□ 0.47
PDLIM7-213ENST00000505074 DEXIO95424 95 aa18.01■□□□□ 0.47
PDLIM7-213ENST00000505074 OATP04181 439 aa18.01■□□□□ 0.47
PDLIM7-213ENST00000505074 CFHP08603 1231 aa18.01■□□□□ 0.47
PDLIM7-213ENST00000505074 CTSAP10619 480 aa18.01■□□□□ 0.47
PDLIM7-213ENST00000505074 USP11P51784 963 aa18.01■□□□□ 0.47
PDLIM7-213ENST00000505074 POLGP54098 1239 aaPredicted RBP18.01■□□□□ 0.47
PDLIM7-213ENST00000505074 TBC1D8BQ0IIM8 1120 aa18.01■□□□□ 0.47
PDLIM7-213ENST00000505074 NONOQ15233 471 aaKnown RBP eCLIP18.01■□□□□ 0.47
PDLIM7-213ENST00000505074 HELQQ8TDG4 1101 aa18.01■□□□□ 0.47
PDLIM7-213ENST00000505074 AUTS2Q8WXX7 1259 aa18.01■□□□□ 0.47
PDLIM7-213ENST00000505074 GJA10Q969M2 543 aa18.01■□□□□ 0.47
PDLIM7-213ENST00000505074 ZNF668Q96K58 619 aaPredicted RBP18.01■□□□□ 0.47
PDLIM7-213ENST00000505074 PCDHA4Q9UN74 947 aa18.01■□□□□ 0.47
PDLIM7-213ENST00000505074 DNAH14Q0VDD8 3507 aa18.01■□□□□ 0.47
PDLIM7-213ENST00000505074 KMT2BQ9UMN6 2715 aaPredicted RBP18.01■□□□□ 0.47
PDLIM7-213ENST00000505074 CARNS1A5YM72 827 aa18■□□□□ 0.47
PDLIM7-213ENST00000505074 NARSO43776 548 aaKnown RBP18■□□□□ 0.47
PDLIM7-213ENST00000505074 SFNP31947 248 aa18■□□□□ 0.47
PDLIM7-213ENST00000505074 JAK3P52333 1124 aa18■□□□□ 0.47
PDLIM7-213ENST00000505074 EVCP57679 992 aa18■□□□□ 0.47
PDLIM7-213ENST00000505074 NLRP11P59045 1033 aaKnown RBP18■□□□□ 0.47
PDLIM7-213ENST00000505074 RSPO4Q2I0M5 234 aaPredicted RBP18■□□□□ 0.47
PDLIM7-213ENST00000505074 MIER3Q7Z3K6 550 aa18■□□□□ 0.47
PDLIM7-213ENST00000505074 BLIDQ8IZY5 108 aa18■□□□□ 0.47
PDLIM7-213ENST00000505074 DCLK2Q8N568 766 aa18■□□□□ 0.47
PDLIM7-213ENST00000505074 ZNF274Q96GC6 653 aaPredicted RBP18■□□□□ 0.47
PDLIM7-213ENST00000505074 RIT2Q99578 217 aa18■□□□□ 0.47
PDLIM7-213ENST00000505074 UNC45AQ9H3U1 944 aa18■□□□□ 0.47
PDLIM7-213ENST00000505074 PDRG1Q9NUG6 133 aa18■□□□□ 0.47
PDLIM7-213ENST00000505074 SEPT9Q9UHD8 586 aaPredicted RBP18■□□□□ 0.47
PDLIM7-213ENST00000505074 NCOR2Q9Y618 2525 aa18■□□□□ 0.47
PDLIM7-213ENST00000505074 KRBA1A5PL33 1030 aa17.99■□□□□ 0.47
PDLIM7-213ENST00000505074 EPB41L2O43491 1005 aaKnown RBP17.99■□□□□ 0.47
PDLIM7-213ENST00000505074 ZNF862O60290 1169 aa17.99■□□□□ 0.47
PDLIM7-213ENST00000505074 TDP2O95551 362 aa17.99■□□□□ 0.47
PDLIM7-213ENST00000505074 SP9P0CG40 484 aa17.99■□□□□ 0.47
PDLIM7-213ENST00000505074 UGCGQ16739 394 aa17.99■□□□□ 0.47
PDLIM7-213ENST00000505074 LETM2Q2VYF4 491 aa17.99■□□□□ 0.47
PDLIM7-213ENST00000505074 DDX53Q86TM3 631 aaKnown RBP17.99■□□□□ 0.47
PDLIM7-213ENST00000505074 FEZF2Q8TBJ5 459 aa17.99■□□□□ 0.47
PDLIM7-213ENST00000505074 SLC5A5Q92911 643 aa17.99■□□□□ 0.47
PDLIM7-213ENST00000505074 OTOGLQ3ZCN5 2332 aa17.99■□□□□ 0.47
PDLIM7-213ENST00000505074 CEP250Q9BV73 2442 aa17.99■□□□□ 0.47
PDLIM7-213ENST00000505074 A0A0U1RQF3 1178 aa17.98■□□□□ 0.47
PDLIM7-213ENST00000505074 ZC3H11AO75152 810 aaKnown RBP eCLIP17.98■□□□□ 0.47
PDLIM7-213ENST00000505074 SDHBP21912 280 aa17.98■□□□□ 0.47
PDLIM7-213ENST00000505074 EIF4BP23588 611 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-213ENST00000505074 MTERF2Q49AM1 385 aa17.98■□□□□ 0.47
PDLIM7-213ENST00000505074 SPECC1Q5M775 1068 aa17.98■□□□□ 0.47
PDLIM7-213ENST00000505074 C15orf39Q6ZRI6 1047 aa17.98■□□□□ 0.47
PDLIM7-213ENST00000505074 ZNF710Q8N1W2 664 aa17.98■□□□□ 0.47
PDLIM7-213ENST00000505074 NLRP7Q8WX94 980 aa17.98■□□□□ 0.47
PDLIM7-213ENST00000505074 AIFM3Q96NN9 605 aa17.98■□□□□ 0.47
PDLIM7-213ENST00000505074 TM6SF1Q9BZW5 370 aa17.98■□□□□ 0.47
PDLIM7-213ENST00000505074 TBC1D17Q9HA65 648 aa17.98■□□□□ 0.47
PDLIM7-213ENST00000505074 CA14Q9ULX7 337 aa17.98■□□□□ 0.47
PDLIM7-213ENST00000505074 EPG5Q9HCE0 2579 aa17.98■□□□□ 0.47
PDLIM7-213ENST00000505074 CDKL5O76039 1030 aa17.97■□□□□ 0.47
PDLIM7-213ENST00000505074 Q4G0T1 1027 aa17.97■□□□□ 0.47
PDLIM7-213ENST00000505074 ZNF598Q86UK7 904 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-213ENST00000505074 RSPH1Q8WYR4 309 aa17.97■□□□□ 0.47
PDLIM7-213ENST00000505074 IGSF21Q96ID5 467 aa17.97■□□□□ 0.47
PDLIM7-213ENST00000505074 EMILIN2Q9BXX0 1053 aa17.97■□□□□ 0.47
PDLIM7-213ENST00000505074 DACT1Q9NYF0 836 aa17.97■□□□□ 0.47
PDLIM7-213ENST00000505074 DDX25Q9UHL0 483 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-213ENST00000505074 SIT1Q9Y3P8 196 aa17.97■□□□□ 0.47
PDLIM7-213ENST00000505074 MIA3Q5JRA6 1907 aa17.96■□□□□ 0.47
PDLIM7-213ENST00000505074 EDIL3O43854 480 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms