RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 ATF7P17544 494 aaPredicted RBP15.83■□□□□ 0.12
HOXC9-202ENST00000504557 LIG1P18858 919 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 KCNA5P22460 613 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 DNAJB1P25685 340 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 RPA1P27694 616 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 FXR2P51116 673 aaKnown RBP eCLIP15.83■□□□□ 0.12
HOXC9-202ENST00000504557 MXD4Q14582 209 aaPredicted RBP15.83■□□□□ 0.12
HOXC9-202ENST00000504557 ECM1Q16610 540 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 RILPL1Q5EBL4 403 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 PADI6Q6TGC4 694 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 DTHD1Q6ZMT9 781 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 LRRC55Q6ZSA7 311 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 MICAL1Q8TDZ2 1067 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 POF1BQ8WVV4 589 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 RAB34Q9BZG1 259 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 GBP3Q9H0R5 595 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 CWH43Q9H720 699 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.83■□□□□ 0.12
HOXC9-202ENST00000504557 AGPAT5Q9NUQ2 364 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 FAM105AQ9NUU6 356 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 DDX19AQ9NUU7 478 aaKnown RBP15.83■□□□□ 0.12
HOXC9-202ENST00000504557 COG5Q9UP83 839 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 PCDHGC5Q9Y5F6 944 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 GLRA2P23416 452 aa15.82■□□□□ 0.12
HOXC9-202ENST00000504557 IRS1P35568 1242 aa15.82■□□□□ 0.12
HOXC9-202ENST00000504557 IL17AQ16552 155 aa15.82■□□□□ 0.12
HOXC9-202ENST00000504557 AAK1Q2M2I8 961 aa15.82■□□□□ 0.12
HOXC9-202ENST00000504557 ZNF598Q86UK7 904 aaKnown RBP15.82■□□□□ 0.12
HOXC9-202ENST00000504557 LRRC43Q8N309 656 aa15.82■□□□□ 0.12
HOXC9-202ENST00000504557 SPPL3Q8TCT6 385 aa15.82■□□□□ 0.12
HOXC9-202ENST00000504557 ADAMTS19Q8TE59 1207 aa15.82■□□□□ 0.12
HOXC9-202ENST00000504557 SYMPKQ92797 1274 aaKnown RBP15.82■□□□□ 0.12
HOXC9-202ENST00000504557 P2RX5Q93086 422 aa15.82■□□□□ 0.12
HOXC9-202ENST00000504557 NECAB3Q96P71 396 aaPredicted RBP15.82■□□□□ 0.12
HOXC9-202ENST00000504557 PLIN2Q99541 437 aa15.82■□□□□ 0.12
HOXC9-202ENST00000504557 APOL6Q9BWW8 343 aa15.82■□□□□ 0.12
HOXC9-202ENST00000504557 BHMT2Q9H2M3 363 aa15.82■□□□□ 0.12
HOXC9-202ENST00000504557 UBE2ZQ9H832 354 aaPredicted RBP15.82■□□□□ 0.12
HOXC9-202ENST00000504557 CLDND1Q9NY35 253 aa15.82■□□□□ 0.12
HOXC9-202ENST00000504557 VWA3AA6NCI4 1184 aa15.81■□□□□ 0.12
HOXC9-202ENST00000504557 E9PMD0 336 aa15.81■□□□□ 0.12
HOXC9-202ENST00000504557 H3BQ06 376 aaPredicted RBP15.81■□□□□ 0.12
HOXC9-202ENST00000504557 FGF18O76093 207 aa15.81■□□□□ 0.12
HOXC9-202ENST00000504557 EOMESO95936 686 aa15.81■□□□□ 0.12
HOXC9-202ENST00000504557 XRCC6P12956 609 aaKnown RBP eCLIP15.81■□□□□ 0.12
HOXC9-202ENST00000504557 LAG3P18627 525 aa15.81■□□□□ 0.12
HOXC9-202ENST00000504557 CA8P35219 290 aa15.81■□□□□ 0.12
HOXC9-202ENST00000504557 GTF2F1P35269 517 aaKnown RBP eCLIP15.81■□□□□ 0.124e-7■■■■■ 30.9
HOXC9-202ENST00000504557 ARL2P36404 184 aa15.81■□□□□ 0.12
HOXC9-202ENST00000504557 PTENP60484 403 aa15.81■□□□□ 0.12
HOXC9-202ENST00000504557 TMEM132AQ24JP5 1023 aa15.81■□□□□ 0.12
HOXC9-202ENST00000504557 KRT79Q5XKE5 535 aa15.81■□□□□ 0.12
HOXC9-202ENST00000504557 FAM43BQ6ZT52 329 aaPredicted RBP15.81■□□□□ 0.12
HOXC9-202ENST00000504557 RBM23Q86U06 439 aaKnown RBP15.81■□□□□ 0.12
HOXC9-202ENST00000504557 CDR2LQ86X02 465 aaPredicted RBP15.81■□□□□ 0.12
HOXC9-202ENST00000504557 CUL9Q8IWT3 2517 aa15.81■□□□□ 0.12
HOXC9-202ENST00000504557 LMAN2LQ9H0V9 348 aa15.81■□□□□ 0.12
HOXC9-202ENST00000504557 DBR1Q9UK59 544 aaKnown RBP15.81■□□□□ 0.12
HOXC9-202ENST00000504557 PCDHB2Q9Y5E7 798 aa15.81■□□□□ 0.12
HOXC9-202ENST00000504557 NT5C1B-RDH14C9J2C7 533 aa15.8■□□□□ 0.12
HOXC9-202ENST00000504557 LAD1O00515 517 aa15.8■□□□□ 0.12
HOXC9-202ENST00000504557 B4GALT5O43286 388 aa15.8■□□□□ 0.12
HOXC9-202ENST00000504557 TSPAN1O60635 241 aa15.8■□□□□ 0.12
HOXC9-202ENST00000504557 ZC3H11AO75152 810 aaKnown RBP eCLIP15.8■□□□□ 0.127e-6■■■■■ 33.7
HOXC9-202ENST00000504557 SSBP05455 408 aaKnown RBP eCLIP15.8■□□□□ 0.12
HOXC9-202ENST00000504557 SKIP12755 728 aa15.8■□□□□ 0.12
HOXC9-202ENST00000504557 RAB27AP51159 221 aa15.8■□□□□ 0.12
HOXC9-202ENST00000504557 RNASELQ05823 741 aaKnown RBP15.8■□□□□ 0.12
HOXC9-202ENST00000504557 CUL4AQ13619 759 aa15.8■□□□□ 0.12
HOXC9-202ENST00000504557 CAMK1Q14012 370 aa15.8■□□□□ 0.12
HOXC9-202ENST00000504557 CLUL1Q15846 466 aa15.8■□□□□ 0.12
HOXC9-202ENST00000504557 KCNT2Q6UVM3 1135 aa15.8■□□□□ 0.12
HOXC9-202ENST00000504557 GLB1LQ6UWU2 654 aa15.8■□□□□ 0.12
HOXC9-202ENST00000504557 ADGRD2Q7Z7M1 963 aa15.8■□□□□ 0.12
HOXC9-202ENST00000504557 IGSF22Q8N9C0 903 aa15.8■□□□□ 0.12
HOXC9-202ENST00000504557 MCPH1Q8NEM0 835 aa15.8■□□□□ 0.12
HOXC9-202ENST00000504557 ZNF558Q96NG5 402 aa15.8■□□□□ 0.12
HOXC9-202ENST00000504557 EIF2AQ9BY44 585 aaKnown RBP15.8■□□□□ 0.12
HOXC9-202ENST00000504557 TRIP11Q15643 1979 aa15.79■□□□□ 0.12
HOXC9-202ENST00000504557 MYH15Q9Y2K3 1946 aa15.79■□□□□ 0.12
HOXC9-202ENST00000504557 HOXA11P31270 313 aaPredicted RBP15.79■□□□□ 0.12
HOXC9-202ENST00000504557 PRPHP41219 470 aa15.79■□□□□ 0.12
HOXC9-202ENST00000504557 ATP2C1P98194 919 aaPredicted RBP15.79■□□□□ 0.12
HOXC9-202ENST00000504557 MBTD1Q05BQ5 628 aa15.79■□□□□ 0.12
HOXC9-202ENST00000504557 NCBP1Q09161 790 aaKnown RBP15.79■□□□□ 0.12
HOXC9-202ENST00000504557 HYAL1Q12794 435 aa15.79■□□□□ 0.12
HOXC9-202ENST00000504557 PDIA5Q14554 519 aa15.79■□□□□ 0.12
HOXC9-202ENST00000504557 NAALADL2Q58DX5 795 aa15.79■□□□□ 0.12
HOXC9-202ENST00000504557 UBXN11Q5T124 520 aa15.79■□□□□ 0.12
HOXC9-202ENST00000504557 PLPP4Q5VZY2 271 aa15.79■□□□□ 0.12
HOXC9-202ENST00000504557 BSNDQ8WZ55 320 aa15.79■□□□□ 0.12
HOXC9-202ENST00000504557 PGBD4Q96DM1 585 aa15.79■□□□□ 0.12
HOXC9-202ENST00000504557 UHRF1Q96T88 793 aaPredicted RBP15.79■□□□□ 0.12
HOXC9-202ENST00000504557 MRPL9Q9BYD2 267 aaKnown RBP15.79■□□□□ 0.12
HOXC9-202ENST00000504557 TRIM6Q9C030 488 aaPredicted RBP15.79■□□□□ 0.12
HOXC9-202ENST00000504557 HES2Q9Y543 173 aa15.79■□□□□ 0.12
HOXC9-202ENST00000504557 K7ELQ4 463 aaPredicted RBP15.78■□□□□ 0.12
HOXC9-202ENST00000504557 LINC01565O15544 149 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 BMP1P13497 986 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 ITGA4P13612 1032 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms