RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	COL6A3	P12111	3177 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810		H3BQV1	296 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	RBAK-RBAKDN	I3L0D1	243 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	RFXAP	O00287	272 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	ZNF862	O60290	1169 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	P4HB	P07237	508 aa	Known RBP	11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	VARS	P26640	1264 aa	Known RBP	11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	MCM7	P33993	719 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	CTNNB1	P35222	781 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	TXK	P42681	527 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	CRYBB1	P53674	252 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	NLRP11	P59045	1033 aa	Known RBP	11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	ST3GAL1	Q11201	340 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	BTG3	Q14201	252 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	EARS2	Q5JPH6	523 aa	Known RBP	11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	SPOUT1	Q5T280	376 aa	Known RBP	11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	PLA2G4F	Q68DD2	849 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	MCTP1	Q6DN14	999 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	KIAA0319L	Q8IZA0	1049 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	TOP1MT	Q969P6	601 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	ZNF668	Q96K58	619 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	CEP170P1	Q96L14	293 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	SAMD11	Q96NU1	681 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	AGO3	Q9H9G7	860 aa	Known RBP	11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	GMPR2	Q9P2T1	348 aa	Known RBP	11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	VAV3	Q9UKW4	847 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	PCDHA12	Q9UN75	941 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	COL4A6	Q14031	1691 aa		11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK11A-222	ENST00000498810	TMEM150B	A6NC51	233 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	ZBTB42	B2RXF5	422 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	EDIL3	O43854	480 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	ARHGEF15	O94989	841 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	ZSCAN20	P17040	1043 aa	Predicted RBP	11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	MCM2	P49736	904 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	GRB10	Q13322	594 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	ADGRE1	Q14246	886 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	EPHA7	Q15375	998 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	PTPRO	Q16827	1216 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	PAN2	Q504Q3	1202 aa	Known RBP	11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	OTUD6A	Q7L8S5	288 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	NPAS4	Q8IUM7	802 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	TPH2	Q8IWU9	490 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	EXOC8	Q8IYI6	725 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	TNFRSF25	Q93038	417 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	DYDC2	Q96IM9	177 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	SH2D3A	Q9BRG2	576 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	C17orf80	Q9BSJ5	609 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	FOXP1	Q9H334	677 aa	Predicted RBP	11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	TTC12	Q9H892	705 aa	Predicted RBP	11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	C1orf112	Q9NSG2	853 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	THEG	Q9P2T0	379 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	NOC2L	Q9Y3T9	749 aa	Known RBP	11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	RWDD3	Q9Y3V2	267 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	PCDHB7	Q9Y5E2	793 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	CDH23	Q9H251	3354 aa		11.92	□□□□□ -0.5
CDK11A-222	ENST00000498810	EPOP	A6NHQ4	379 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	EML1	O00423	815 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	ENPP3	O14638	875 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	CSPG5	O95196	566 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	SFPQ	P23246	707 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	YWHAB	P31946	246 aa	Known RBP	11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	ERVK-21	P61565	698 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	HTRA4	P83105	476 aa	Predicted RBP	11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	CTTN	Q14247	550 aa	Known RBP	11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	XKR9	Q5GH70	373 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	TTC38	Q5R3I4	469 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	RHPN2	Q8IUC4	686 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	ABI1	Q8IZP0	508 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	ERMN	Q8TAM6	284 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	NEK9	Q8TD19	979 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	NLRP4	Q96MN2	994 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	KIF2C	Q99661	725 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	ADAM2	Q99965	735 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	FAM117A	Q9C073	453 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	ZSWIM4	Q9H7M6	989 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	ERVK-5	Q9HDB9	667 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	CYP26B1	Q9NR63	512 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	ST3GAL5	Q9UNP4	418 aa		11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.91	□□□□□ -0.5
CDK11A-222	ENST00000498810	OR52Z1	P0C646	297 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	RFC5	P40937	340 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	SARS	P49591	514 aa	Known RBP	11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	GPC3	P51654	580 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	CDC42EP1	Q00587	391 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	SPRED2	Q7Z698	418 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	FAM228A	Q86W67	206 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	NOSTRIN	Q8IVI9	506 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	TMEM192	Q8IY95	271 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	RNF169	Q8NCN4	708 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	FBXO18	Q8NFZ0	1043 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	TMEM40	Q8WWA1	233 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	LINC01599	Q8WXQ3	324 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	HAS1	Q92839	578 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	TBC1D32	Q96NH3	1257 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	NIFK	Q9BYG3	293 aa	Known RBP	11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	INO80B	Q9C086	356 aa	Predicted RBP	11.9	□□□□□ -0.5

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