RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 PPHLN1Q8NEY8 458 aaKnown RBP9.94□□□□□ -0.82
SNX13-212ENST00000498463 TTLL11Q8NHH1 800 aa9.94□□□□□ -0.82
SNX13-212ENST00000498463 GCC1Q96CN9 775 aa9.94□□□□□ -0.82
SNX13-212ENST00000498463 PAGR1Q9BTK6 254 aa9.94□□□□□ -0.82
SNX13-212ENST00000498463 AP5M1Q9H0R1 490 aa9.94□□□□□ -0.82
SNX13-212ENST00000498463 MTG2Q9H4K7 406 aa9.94□□□□□ -0.82
SNX13-212ENST00000498463 ZMAT3Q9HA38 289 aaKnown RBP9.94□□□□□ -0.82
SNX13-212ENST00000498463 EVLQ9UI08 416 aaPredicted RBP9.94□□□□□ -0.82
SNX13-212ENST00000498463 SCOCQ9UIL1 159 aa9.94□□□□□ -0.82
SNX13-212ENST00000498463 PALD1Q9ULE6 856 aa9.94□□□□□ -0.82
SNX13-212ENST00000498463 PCDHGB2Q9Y5G2 931 aa9.94□□□□□ -0.82
SNX13-212ENST00000498463 POM121BA6NF01 834 aa9.93□□□□□ -0.82
SNX13-212ENST00000498463 GLI4P10075 376 aa9.93□□□□□ -0.82
SNX13-212ENST00000498463 TSHRP16473 764 aa9.93□□□□□ -0.82
SNX13-212ENST00000498463 RPL17P18621 184 aaKnown RBP9.93□□□□□ -0.82
SNX13-212ENST00000498463 MC4RP32245 332 aa9.93□□□□□ -0.82
SNX13-212ENST00000498463 MAPK9P45984 424 aa9.93□□□□□ -0.82
SNX13-212ENST00000498463 THEMIS2Q5TEJ8 643 aa9.93□□□□□ -0.82
SNX13-212ENST00000498463 ZSCAN18Q8TBC5 510 aaPredicted RBP9.93□□□□□ -0.82
SNX13-212ENST00000498463 ARL8AQ96BM9 186 aa9.93□□□□□ -0.82
SNX13-212ENST00000498463 TBATAQ96M53 351 aa9.93□□□□□ -0.82
SNX13-212ENST00000498463 ADI1Q9BV57 179 aa9.93□□□□□ -0.82
SNX13-212ENST00000498463 OSBPL1AQ9BXW6 950 aa9.93□□□□□ -0.82
SNX13-212ENST00000498463 ARMT1Q9H993 441 aa9.93□□□□□ -0.82
SNX13-212ENST00000498463 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.93□□□□□ -0.82
SNX13-212ENST00000498463 USP18Q9UMW8 372 aa9.93□□□□□ -0.82
SNX13-212ENST00000498463 SIT1Q9Y3P8 196 aa9.93□□□□□ -0.82
SNX13-212ENST00000498463 M0R3H8 397 aa9.92□□□□□ -0.82
SNX13-212ENST00000498463 FOXN3O00409 490 aaPredicted RBP9.92□□□□□ -0.82
SNX13-212ENST00000498463 SLC16A6O15403 523 aa9.92□□□□□ -0.82
SNX13-212ENST00000498463 SGSM2O43147 1006 aa9.92□□□□□ -0.82
SNX13-212ENST00000498463 MAPK10P53779 464 aa9.92□□□□□ -0.82
SNX13-212ENST00000498463 ICA1Q05084 483 aa9.92□□□□□ -0.82
SNX13-212ENST00000498463 BLMHQ13867 455 aa9.92□□□□□ -0.82
SNX13-212ENST00000498463 CCDC38Q502W7 563 aa9.92□□□□□ -0.82
SNX13-212ENST00000498463 LCE2AQ5TA79 106 aaPredicted RBP9.92□□□□□ -0.82
SNX13-212ENST00000498463 BTNL9Q6UXG8 535 aa9.92□□□□□ -0.82
SNX13-212ENST00000498463 LIX1LQ8IVB5 337 aa9.92□□□□□ -0.82
SNX13-212ENST00000498463 NUP43Q8NFH3 380 aa9.92□□□□□ -0.82
SNX13-212ENST00000498463 GREM2Q9H772 168 aa9.92□□□□□ -0.82
SNX13-212ENST00000498463 UCKL1Q9NWZ5 548 aa9.92□□□□□ -0.82
SNX13-212ENST00000498463 STAP2Q9UGK3 403 aa9.92□□□□□ -0.82
SNX13-212ENST00000498463 PCDHB1Q9Y5F3 818 aa9.92□□□□□ -0.82
SNX13-212ENST00000498463 GSPT1P15170 499 aaKnown RBP9.91□□□□□ -0.82
SNX13-212ENST00000498463 CASP2P42575 452 aa9.91□□□□□ -0.82
SNX13-212ENST00000498463 TECP42680 631 aa9.91□□□□□ -0.82
SNX13-212ENST00000498463 DBPQ10586 325 aaPredicted RBP9.91□□□□□ -0.82
SNX13-212ENST00000498463 KRBA2Q6ZNG9 492 aa9.91□□□□□ -0.82
SNX13-212ENST00000498463 MILR1Q7Z6M3 343 aa9.91□□□□□ -0.82
SNX13-212ENST00000498463 TTC7BQ86TV6 843 aa9.91□□□□□ -0.82
SNX13-212ENST00000498463 TMTC2Q8N394 836 aa9.91□□□□□ -0.82
SNX13-212ENST00000498463 NETO2Q8NC67 525 aa9.91□□□□□ -0.82
SNX13-212ENST00000498463 GLB1L3Q8NCI6 653 aaPredicted RBP9.91□□□□□ -0.82
SNX13-212ENST00000498463 ARRDC4Q8NCT1 418 aa9.91□□□□□ -0.82
SNX13-212ENST00000498463 OR2I1PQ8NGU4 316 aa9.91□□□□□ -0.82
SNX13-212ENST00000498463 NSUN6Q8TEA1 469 aaKnown RBP9.91□□□□□ -0.82
SNX13-212ENST00000498463 GAB3Q8WWW8 586 aa9.91□□□□□ -0.82
SNX13-212ENST00000498463 SKA1Q96BD8 255 aa9.91□□□□□ -0.82
SNX13-212ENST00000498463 ZC3H10Q96K80 434 aaKnown RBP9.91□□□□□ -0.82
SNX13-212ENST00000498463 EIF2AK1Q9BQI3 630 aaKnown RBP9.91□□□□□ -0.82
SNX13-212ENST00000498463 C14orf93Q9H972 538 aaKnown RBP9.91□□□□□ -0.82
SNX13-212ENST00000498463 PCDHB6Q9Y5E3 794 aa9.91□□□□□ -0.82
SNX13-212ENST00000498463 PCDHA13Q9Y5I0 950 aa9.91□□□□□ -0.82
SNX13-212ENST00000498463 LRRC14BA6NHZ5 514 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 ADAMTS3O15072 1205 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 PHGDHO43175 533 aaKnown RBP9.9□□□□□ -0.82
SNX13-212ENST00000498463 OPHN1O60890 802 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 MPIG6BO95866 241 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 LDHCP07864 332 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 HSP90AA1P07900 732 aaKnown RBP9.9□□□□□ -0.82
SNX13-212ENST00000498463 ZGLP1P0C6A0 271 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 FAHP16930 419 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 PRKCAP17252 672 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 DDIT3P35638 169 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 PPP3CAQ08209 521 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 MGAT2Q10469 447 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 NFIAQ12857 509 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 NOGQ13253 232 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 PMS2P11Q13670 270 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 KIR3DS1Q14943 382 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 NOLC1Q14978 699 aaKnown RBP eCLIP9.9□□□□□ -0.82
SNX13-212ENST00000498463 NR0B2Q15466 257 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 PPP4R3AQ6IN85 833 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 GALNT18Q6P9A2 607 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 GAREM2Q75VX8 874 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 CDYL2Q8N8U2 506 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 IL17REQ8NFR9 667 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 ASB11Q8WXH4 323 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 ANKS1AQ92625 1134 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 RPGRQ92834 1020 aaKnown RBP9.9□□□□□ -0.82
SNX13-212ENST00000498463 MTFMTQ96DP5 389 aaKnown RBP9.9□□□□□ -0.82
SNX13-212ENST00000498463 TMEM41AQ96HV5 264 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 DBNDD2Q9BQY9 259 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 PLCD4Q9BRC7 762 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 INO80BQ9C086 356 aaPredicted RBP9.9□□□□□ -0.82
SNX13-212ENST00000498463 KIAA1586Q9HCI6 787 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 ACSL6Q9UKU0 697 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 SYNPO2Q9UMS6 1093 aa9.9□□□□□ -0.82
SNX13-212ENST00000498463 A0A1W2PQJ5 194 aa9.89□□□□□ -0.83
SNX13-212ENST00000498463 NFIBO00712 420 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms