RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 SAMD4BQ5PRF9 694 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 TTC22Q5TAA0 569 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 SLC2A7Q6PXP3 512 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 DNAJC14Q6Y2X3 702 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 GK5Q6ZS86 529 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 ADCK2Q7Z695 626 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 FAM186BQ8IYM0 893 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 SRBD1Q8N5C6 995 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 RNF217Q8TC41 542 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 FAM200AQ8TCP9 573 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 GPBAR1Q8TDU6 330 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 HSPH1Q92598 858 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 OTUB2Q96DC9 234 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 LGALS12Q96DT0 336 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 ITPKCQ96DU7 683 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 KIRREL1Q96J84 757 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CCDC138Q96M89 665 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 WDR83Q9BRX9 315 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 SLC39A3Q9BRY0 314 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 ROGDIQ9GZN7 287 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CRISPLD1Q9H336 500 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 JPH1Q9HDC5 661 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 PRDM8Q9NQV8 689 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 LIMD1Q9UGP4 676 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 NUFIP1Q9UHK0 495 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 NARFQ9UHQ1 456 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 ITGA11Q9UKX5 1188 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 ODF2LQ9ULJ1 636 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 ING4Q9UNL4 249 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 TBC1D2BQ9UPU7 963 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 NAV2Q8IVL1 2488 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 TRPM7Q96QT4 1865 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 ELOA3CA0A087WX78 387 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 ELOA3DA6NLF2 546 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 U2SURPO15042 1029 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 PPFIA4O75335 1185 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 RASSF9O75901 435 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 CYP2C8P10632 490 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 CKBP12277 381 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ST6GAL1P15907 406 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 GUCY1A2P33402 732 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 MTHFRP42898 656 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 RAB1AP62820 205 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 PRKG2Q13237 762 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ELOA3BQ3SY89 546 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 MUM1L1Q5H9M0 696 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 CACHD1Q5VU97 1274 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 MSL1Q68DK7 614 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 FAM180AQ6UWF9 173 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 BNC2Q6ZN30 1099 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 TTLL7Q6ZT98 887 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 INTS8Q75QN2 995 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 SH3RF1Q7Z6J0 888 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TBC1D1Q86TI0 1168 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 ATP11CQ8NB49 1132 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 LPCAT1Q8NF37 534 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ELOA3Q8NG57 546 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ZSCAN18Q8TBC5 510 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 MICAL1Q8TDZ2 1067 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ZNF384Q8TF68 577 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TADA1Q96BN2 335 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ALKBH8Q96BT7 664 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 ANAPC16Q96DE5 110 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 MYO19Q96H55 970 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 DRC1Q96MC2 740 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 C1orf43Q9BWL3 253 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 STK31Q9BXU1 1019 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TSPYL1Q9H0U9 437 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 RUBCNLQ9H714 662 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 LMAN1LQ9HAT1 526 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ZFP64Q9NPA5 681 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.6□□□□□ -2.15
XRN1-214ENST00000498077 IQSEC3Q9UPP2 1182 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 HIF3AQ9Y2N7 669 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 PCDHB15Q9Y5E8 787 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 COL1A1P02452 1464 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 TTBK1Q5TCY1 1321 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 ARHGEF17Q96PE2 2063 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 SIN3BO75182 1162 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 CRCPO75575 148 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 RECQL4O94761 1208 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 AQP8O94778 261 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 RGS11O94810 467 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 BMP15O95972 392 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 KLKB1P03952 638 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 SLFN14P0C7P3 912 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 KRT10P13645 584 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ZSCAN20P17040 1043 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 WEE1P30291 646 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TRHRP34981 398 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 IREB2P48200 963 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 DYNC1I2Q13409 638 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 SUZ12Q15022 739 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 STXBP4Q6ZWJ1 553 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TMC4Q7Z404 712 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 DPP9Q86TI2 863 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TTC7BQ86TV6 843 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 SLC9B2Q86UD5 537 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 DCP2Q8IU60 420 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 PLEKHM2Q8IWE5 1019 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms