RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 NR6A1Q15406 480 aa17.1■□□□□ 0.33
TNRC18-210ENST00000497663 EFCAB12Q6NXP0 572 aa17.1■□□□□ 0.33
TNRC18-210ENST00000497663 RUFY3Q7L099 469 aa17.1■□□□□ 0.33
TNRC18-210ENST00000497663 TBCKQ8TEA7 893 aa17.1■□□□□ 0.33
TNRC18-210ENST00000497663 TNPO1Q92973 898 aaKnown RBP17.1■□□□□ 0.33
TNRC18-210ENST00000497663 MSLNLQ96KJ4 702 aa17.1■□□□□ 0.33
TNRC18-210ENST00000497663 CEP89Q96ST8 783 aa17.1■□□□□ 0.33
TNRC18-210ENST00000497663 DISC1Q9NRI5 854 aa17.1■□□□□ 0.33
TNRC18-210ENST00000497663 BARX2Q9UMQ3 279 aaPredicted RBP17.1■□□□□ 0.33
TNRC18-210ENST00000497663 PCDHB7Q9Y5E2 793 aa17.1■□□□□ 0.33
TNRC18-210ENST00000497663 DENND3A2RUS2 1198 aa17.09■□□□□ 0.33
TNRC18-210ENST00000497663 RPLP2P05387 115 aaKnown RBP17.09■□□□□ 0.33
TNRC18-210ENST00000497663 STAG3L1P0CL83 205 aa17.09■□□□□ 0.33
TNRC18-210ENST00000497663 GNA11P29992 359 aa17.09■□□□□ 0.33
TNRC18-210ENST00000497663 SMAD2Q15796 467 aaKnown RBP17.09■□□□□ 0.33
TNRC18-210ENST00000497663 SLC24A5Q71RS6 500 aa17.09■□□□□ 0.33
TNRC18-210ENST00000497663 SMAP1Q8IYB5 467 aaPredicted RBP17.09■□□□□ 0.33
TNRC18-210ENST00000497663 ARMC2Q8NEN0 867 aa17.09■□□□□ 0.33
TNRC18-210ENST00000497663 SAMM50Q9Y512 469 aa17.09■□□□□ 0.33
TNRC18-210ENST00000497663 FNDC1Q4ZHG4 1894 aaPredicted RBP17.09■□□□□ 0.33
TNRC18-210ENST00000497663 WDFY4Q6ZS81 3184 aa17.08■□□□□ 0.33
TNRC18-210ENST00000497663 WDR64B1ANS9 1081 aa17.08■□□□□ 0.32
TNRC18-210ENST00000497663 PSMD10O75832 226 aa17.08■□□□□ 0.32
TNRC18-210ENST00000497663 NLRP5P59047 1200 aa17.08■□□□□ 0.32
TNRC18-210ENST00000497663 AKAP17AQ02040 695 aaKnown RBP17.08■□□□□ 0.32
TNRC18-210ENST00000497663 MCM6Q14566 821 aa17.08■□□□□ 0.32
TNRC18-210ENST00000497663 TARBP2Q15633 366 aaKnown RBP17.08■□□□□ 0.32
TNRC18-210ENST00000497663 B3GNT9Q6UX72 402 aa17.08■□□□□ 0.32
TNRC18-210ENST00000497663 ADHFE1Q8IWW8 467 aa17.08■□□□□ 0.32
TNRC18-210ENST00000497663 COLGALT1Q8NBJ5 622 aa17.08■□□□□ 0.32
TNRC18-210ENST00000497663 CCDC12Q8WUD4 166 aaPredicted RBP17.08■□□□□ 0.32
TNRC18-210ENST00000497663 CASD1Q96PB1 797 aa17.08■□□□□ 0.32
TNRC18-210ENST00000497663 KCNJ14Q9UNX9 436 aa17.08■□□□□ 0.32
TNRC18-210ENST00000497663 AKT3Q9Y243 479 aa17.08■□□□□ 0.32
TNRC18-210ENST00000497663 GPR182O15218 404 aa17.07■□□□□ 0.32
TNRC18-210ENST00000497663 SLC37A4O43826 429 aa17.07■□□□□ 0.32
TNRC18-210ENST00000497663 FGF18O76093 207 aa17.07■□□□□ 0.32
TNRC18-210ENST00000497663 GPC3P51654 580 aa17.07■□□□□ 0.32
TNRC18-210ENST00000497663 CLLU1OSQ5K130 101 aa17.07■□□□□ 0.32
TNRC18-210ENST00000497663 LRCH2Q5VUJ6 765 aa17.07■□□□□ 0.32
TNRC18-210ENST00000497663 EFHBQ8N7U6 833 aa17.07■□□□□ 0.32
TNRC18-210ENST00000497663 MUTYHQ9UIF7 546 aa17.07■□□□□ 0.32
TNRC18-210ENST00000497663 CD207Q9UJ71 328 aa17.07■□□□□ 0.32
TNRC18-210ENST00000497663 CDH22Q9UJ99 828 aa17.07■□□□□ 0.32
TNRC18-210ENST00000497663 PCDHA4Q9UN74 947 aa17.07■□□□□ 0.32
TNRC18-210ENST00000497663 WDR81Q562E7 1941 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 EML1O00423 815 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 FSCN2O14926 492 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 GAS7O60861 476 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 ATF7P17544 494 aaPredicted RBP17.06■□□□□ 0.32
TNRC18-210ENST00000497663 PSMA5P28066 241 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 NDUFV1P49821 464 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 USP11P51784 963 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 SMAD4Q13485 552 aaKnown RBP17.06■□□□□ 0.32
TNRC18-210ENST00000497663 Q4G0T1 1027 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 NAALADL2Q58DX5 795 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 SPOUT1Q5T280 376 aaKnown RBP17.06■□□□□ 0.32
TNRC18-210ENST00000497663 KSR1Q8IVT5 923 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 CCDC148Q8NFR7 591 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 ETNPPLQ8TBG4 499 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 FEZF2Q8TBJ5 459 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 FAM122AQ96E09 287 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 MBOAT7Q96N66 472 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 ATP6V0A4Q9HBG4 840 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 C1orf112Q9NSG2 853 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 TMEM161AQ9NX61 479 aa17.06■□□□□ 0.32
TNRC18-210ENST00000497663 MYH9P35579 1960 aaKnown RBP17.06■□□□□ 0.32
TNRC18-210ENST00000497663 HIDE1A8MVS5 230 aa17.05■□□□□ 0.32
TNRC18-210ENST00000497663 DCXO43602 365 aa17.05■□□□□ 0.32
TNRC18-210ENST00000497663 NCK2O43639 380 aa17.05■□□□□ 0.32
TNRC18-210ENST00000497663 REC8O95072 547 aa17.05■□□□□ 0.32
TNRC18-210ENST00000497663 EYA4O95677 639 aa17.05■□□□□ 0.32
TNRC18-210ENST00000497663 SSRP1Q08945 709 aaKnown RBP17.05■□□□□ 0.32
TNRC18-210ENST00000497663 LONRF3Q496Y0 759 aa17.05■□□□□ 0.32
TNRC18-210ENST00000497663 MTERF2Q49AM1 385 aa17.05■□□□□ 0.32
TNRC18-210ENST00000497663 EARS2Q5JPH6 523 aaKnown RBP17.05■□□□□ 0.32
TNRC18-210ENST00000497663 ECHDC2Q86YB7 292 aa17.05■□□□□ 0.32
TNRC18-210ENST00000497663 BLIDQ8IZY5 108 aa17.05■□□□□ 0.32
TNRC18-210ENST00000497663 RNF169Q8NCN4 708 aa17.05■□□□□ 0.32
TNRC18-210ENST00000497663 BICD2Q8TD16 824 aa17.05■□□□□ 0.32
TNRC18-210ENST00000497663 RIT2Q99578 217 aa17.05■□□□□ 0.32
TNRC18-210ENST00000497663 TEKT3Q9BXF9 490 aa17.05■□□□□ 0.32
TNRC18-210ENST00000497663 SH3GLB2Q9NR46 395 aa17.05■□□□□ 0.32
TNRC18-210ENST00000497663 WRAP73Q9P2S5 460 aaPredicted RBP17.05■□□□□ 0.32
TNRC18-210ENST00000497663 PRKAG3Q9UGI9 489 aa17.05■□□□□ 0.32
TNRC18-210ENST00000497663 TECTAO75443 2155 aa17.04■□□□□ 0.32
TNRC18-210ENST00000497663 CYP3A7-CYP3A51PA0A087WV96 503 aa17.04■□□□□ 0.32
TNRC18-210ENST00000497663 MEIS3P2A8K0S8 358 aa17.04■□□□□ 0.32
TNRC18-210ENST00000497663 MAGEB2O15479 319 aa17.04■□□□□ 0.32
TNRC18-210ENST00000497663 DARSP14868 501 aaKnown RBP17.04■□□□□ 0.32
TNRC18-210ENST00000497663 EIF4BP23588 611 aaKnown RBP17.04■□□□□ 0.32
TNRC18-210ENST00000497663 CYP3A7P24462 503 aa17.04■□□□□ 0.32
TNRC18-210ENST00000497663 SCRN1Q12765 414 aa17.04■□□□□ 0.32
TNRC18-210ENST00000497663 INF2Q27J81 1249 aa17.04■□□□□ 0.32
TNRC18-210ENST00000497663 PLPP4Q5VZY2 271 aa17.04■□□□□ 0.32
TNRC18-210ENST00000497663 PLA2G4FQ68DD2 849 aa17.04■□□□□ 0.32
TNRC18-210ENST00000497663 MCTP2Q6DN12 878 aa17.04■□□□□ 0.32
TNRC18-210ENST00000497663 MIER3Q7Z3K6 550 aa17.04■□□□□ 0.32
TNRC18-210ENST00000497663 ZNF598Q86UK7 904 aaKnown RBP17.04■□□□□ 0.32
TNRC18-210ENST00000497663 RNF135Q8IUD6 432 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms