RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 RINT1Q6NUQ1 792 aa15.93■□□□□ 0.14
SCAP-213ENST00000494938 CABP7Q86V35 215 aa15.93■□□□□ 0.14
SCAP-213ENST00000494938 KCTD17Q8N5Z5 321 aa15.93■□□□□ 0.14
SCAP-213ENST00000494938 LRRC15Q8TF66 581 aa15.93■□□□□ 0.14
SCAP-213ENST00000494938 USP28Q96RU2 1077 aa15.93■□□□□ 0.14
SCAP-213ENST00000494938 TYW1Q9NV66 732 aaKnown RBP15.93■□□□□ 0.14
SCAP-213ENST00000494938 LMCD1Q9NZU5 365 aa15.93■□□□□ 0.14
SCAP-213ENST00000494938 FBXO2Q9UK22 296 aaPredicted RBP15.93■□□□□ 0.14
SCAP-213ENST00000494938 SRPRBQ9Y5M8 271 aaKnown RBP15.93■□□□□ 0.14
SCAP-213ENST00000494938 COL4A6Q14031 1691 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 REV3LO60673 3130 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 INO80B-WBP1J3KQ70 363 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 SLC26A4O43511 780 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 TSPAN1O60635 241 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 CEBPZQ03701 1054 aaKnown RBP15.92■□□□□ 0.14
SCAP-213ENST00000494938 GPM6BQ13491 265 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 SLC39A14Q15043 492 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 PCBP1Q15365 356 aaKnown RBP eCLIP15.92■□□□□ 0.14
SCAP-213ENST00000494938 CLLU1OSQ5K130 101 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 CDCA2Q69YH5 1023 aaPredicted RBP15.92■□□□□ 0.14
SCAP-213ENST00000494938 USP49Q70CQ1 688 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 MRPL10Q7Z7H8 261 aaKnown RBP15.92■□□□□ 0.14
SCAP-213ENST00000494938 DAW1Q8N136 415 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 SYT2Q8N9I0 419 aaPredicted RBP15.92■□□□□ 0.14
SCAP-213ENST00000494938 RNF169Q8NCN4 708 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 PPM1EQ8WY54 764 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 RUSC1Q9BVN2 902 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 TMEM117Q9H0C3 514 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 CSRNP2Q9H175 543 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 FZD8Q9H461 694 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 CWH43Q9H720 699 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 FAM105AQ9NUU6 356 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 HCSTQ9UBK5 93 aa15.92■□□□□ 0.14
SCAP-213ENST00000494938 MORC2Q9Y6X9 1032 aaPredicted RBP15.92■□□□□ 0.14
SCAP-213ENST00000494938 GBF1Q92538 1859 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 LRRIQ4A6NIV6 560 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 MEIS3P2A8K0S8 358 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 GTPBP6O43824 516 aaPredicted RBP15.91■□□□□ 0.14
SCAP-213ENST00000494938 HSP90AA1P07900 732 aaKnown RBP15.91■□□□□ 0.14
SCAP-213ENST00000494938 PLA2G4BP0C869 781 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 SKIP12755 728 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 PDIA4P13667 645 aaKnown RBP15.91■□□□□ 0.14
SCAP-213ENST00000494938 AXLP30530 894 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 CTNNB1P35222 781 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 UBA7P41226 1012 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 SLC12A3P55017 1021 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 PKP1Q13835 747 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 ARSHQ5FYA8 562 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 FOXD4L5Q5VV16 416 aaPredicted RBP15.91■□□□□ 0.14
SCAP-213ENST00000494938 FOXD4L4Q8WXT5 416 aaPredicted RBP15.91■□□□□ 0.14
SCAP-213ENST00000494938 KIFAP3Q92845 792 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 LPPQ93052 612 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 CPB2Q96IY4 423 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 EPSTI1Q96J88 318 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 CLIC6Q96NY7 704 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 PLVAPQ9BX97 442 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 NT5C3AQ9H0P0 336 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 TFIP11Q9UBB9 837 aaKnown RBP15.91■□□□□ 0.14
SCAP-213ENST00000494938 PLAGL2Q9UPG8 496 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 RWDD3Q9Y3V2 267 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 PCDHB2Q9Y5E7 798 aa15.91■□□□□ 0.14
SCAP-213ENST00000494938 UNC80Q8N2C7 3258 aa15.9■□□□□ 0.14
SCAP-213ENST00000494938 TTLL13PA6NNM8 815 aa15.9■□□□□ 0.14
SCAP-213ENST00000494938 GRM6O15303 877 aa15.9■□□□□ 0.14
SCAP-213ENST00000494938 B4GALT5O43286 388 aa15.9■□□□□ 0.14
SCAP-213ENST00000494938 HOXA2O43364 376 aa15.9■□□□□ 0.14
SCAP-213ENST00000494938 OFD1O75665 1012 aa15.9■□□□□ 0.14
SCAP-213ENST00000494938 ZSCAN22P10073 491 aaPredicted RBP15.9■□□□□ 0.14
SCAP-213ENST00000494938 ARF4P18085 180 aaPredicted RBP15.9■□□□□ 0.14
SCAP-213ENST00000494938 NAMPTP43490 491 aa15.9■□□□□ 0.14
SCAP-213ENST00000494938 NASPP49321 788 aaPredicted RBP15.9■□□□□ 0.14
SCAP-213ENST00000494938 MAPK7Q13164 816 aa15.9■□□□□ 0.14
SCAP-213ENST00000494938 FAM187BQ17R55 369 aa15.9■□□□□ 0.14
SCAP-213ENST00000494938 LONRF3Q496Y0 759 aa15.9■□□□□ 0.14
SCAP-213ENST00000494938 SPECC1Q5M775 1068 aa15.9■□□□□ 0.14
SCAP-213ENST00000494938 SLC17A8Q8NDX2 589 aa15.9■□□□□ 0.14
SCAP-213ENST00000494938 HELQQ8TDG4 1101 aa15.9■□□□□ 0.14
SCAP-213ENST00000494938 EIF2AQ9BY44 585 aaKnown RBP15.9■□□□□ 0.14
SCAP-213ENST00000494938 CCSER1Q9C0I3 900 aa15.9■□□□□ 0.14
SCAP-213ENST00000494938 PRDM6Q9NQX0 595 aa15.9■□□□□ 0.14
SCAP-213ENST00000494938 BLOC1S4Q9NUP1 217 aa15.9■□□□□ 0.14
SCAP-213ENST00000494938 A0A1B0GUA9 196 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 SFI1A8K8P3 1242 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 HIP1RO75146 1068 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 ERLIN2O94905 339 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 GUCY2CP25092 1073 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 NCBP1Q09161 790 aaKnown RBP15.89■□□□□ 0.13
SCAP-213ENST00000494938 CAMK1Q14012 370 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 KARSQ15046 597 aaKnown RBP15.89■□□□□ 0.13
SCAP-213ENST00000494938 NAALADL2Q58DX5 795 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 PPP4R3CPQ6ZMV5 832 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 AGMOQ6ZNB7 445 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 MICALL1Q8N3F8 863 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 KLHL23Q8NBE8 558 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 LINC00301Q8NCQ3 95 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 SMG8Q8ND04 991 aaKnown RBP15.89■□□□□ 0.13
SCAP-213ENST00000494938 SPPL3Q8TCT6 385 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 P2RX5Q93086 422 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 MRPL38Q96DV4 380 aaKnown RBP15.89■□□□□ 0.13
SCAP-213ENST00000494938 KIFC3Q9BVG8 833 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms