RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 HS2ST1Q7LGA3 356 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 PPFIBP1Q86W92 1011 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 IFNLR1Q8IU57 520 aaPredicted RBP7.45□□□□□ -1.22
MSH5-217ENST00000494458 TMTC1Q8IUR5 882 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 REXO1L1PQ8IX06 675 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 DHX37Q8IY37 1157 aaKnown RBP7.45□□□□□ -1.22
MSH5-217ENST00000494458 BAP1Q92560 729 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 COPS5Q92905 334 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 EEF2KMTQ96G04 330 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 MFSD14AQ96MC6 490 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 SPATA33Q96N06 139 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 BAG1Q99933 345 aaPredicted RBP7.45□□□□□ -1.22
MSH5-217ENST00000494458 NFKBIZQ9BYH8 718 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 IKZF4Q9H2S9 585 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 ZHX3Q9H4I2 956 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 ZFYVE28Q9HCC9 887 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 ABHD10Q9NUJ1 306 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 SLC5A4Q9NY91 659 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.45□□□□□ -1.22
MSH5-217ENST00000494458 ARMCX3Q9UH62 379 aaPredicted RBP7.45□□□□□ -1.22
MSH5-217ENST00000494458 CPA4Q9UI42 421 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 MYO6Q9UM54 1294 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 DAAM1Q9Y4D1 1078 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 ADGRA3Q8IWK6 1321 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 PLXNB2O15031 1838 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 ARID2Q68CP9 1835 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 K7ENM7 598 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 KIAA0391O15091 583 aaKnown RBP7.44□□□□□ -1.22
MSH5-217ENST00000494458 SLC16A4O15374 487 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 P4HA2O15460 535 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 LCA5LO95447 670 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 ALDH1A1P00352 501 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 AFPP02771 609 aaKnown RBP7.44□□□□□ -1.22
MSH5-217ENST00000494458 SMPD1P17405 629 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 CTGFP29279 349 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 KRT9P35527 623 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 TAF1CQ15572 869 aaPredicted RBP7.44□□□□□ -1.22
MSH5-217ENST00000494458 ASTE1Q2TB18 679 aaPredicted RBP7.44□□□□□ -1.22
MSH5-217ENST00000494458 ZNF484Q5JVG2 852 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 FKBP15Q5T1M5 1219 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 FAM102BQ5T8I3 360 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 DPP9Q86TI2 863 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 KSR1Q8IVT5 923 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 LMO3Q8TAP4 145 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 ASAP3Q8TDY4 903 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 SOCS4Q8WXH5 440 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 ZIC5Q96T25 663 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 JPH2Q9BR39 696 aaPredicted RBP7.44□□□□□ -1.22
MSH5-217ENST00000494458 SH2D3AQ9BRG2 576 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 CCDC113Q9H0I3 377 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 GANQ9H2C0 597 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 AZI2Q9H6S1 392 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 KMT5AQ9NQR1 393 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 AGPAT5Q9NUQ2 364 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 ERAP1Q9NZ08 941 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 SEPT9Q9UHD8 586 aaPredicted RBP7.44□□□□□ -1.22
MSH5-217ENST00000494458 EXOC7Q9UPT5 735 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 LUC7L2Q9Y383 392 aaKnown RBP7.44□□□□□ -1.22
MSH5-217ENST00000494458 COQ4Q9Y3A0 265 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.44□□□□□ -1.22
MSH5-217ENST00000494458 DOCK5Q9H7D0 1870 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 PLXNA1Q9UIW2 1896 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 PHLPP2Q6ZVD8 1323 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 COL1A2P08123 1366 aa7.44□□□□□ -1.22
MSH5-217ENST00000494458 MYH9P35579 1960 aaKnown RBP7.43□□□□□ -1.22
MSH5-217ENST00000494458 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.43□□□□□ -1.22
MSH5-217ENST00000494458 DENND3A2RUS2 1198 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 ANKRD63C9JTQ0 380 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 HAS3O00219 553 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 ABLIM1O14639 778 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 EPHB6O15197 1021 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 CLIC2O15247 247 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 ASAP2O43150 1006 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 ADCY6O43306 1168 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 ADCY3O60266 1144 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 LGALS2P05162 132 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 EPB41P11171 864 aaKnown RBP7.43□□□□□ -1.22
MSH5-217ENST00000494458 PON1P27169 355 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 HOXC8P31273 242 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 ADCYAP1R1P41586 468 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 KLK7P49862 253 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 TERF1P54274 439 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 SOX10P56693 466 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 ADAM17P78536 824 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 POU5F1Q01860 360 aaKnown RBP7.43□□□□□ -1.22
MSH5-217ENST00000494458 GOLGA8FQ08AF8 430 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 GOLGA8DPQ0D2H9 430 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 CRHR2Q13324 411 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 MXD4Q14582 209 aaPredicted RBP7.43□□□□□ -1.22
MSH5-217ENST00000494458 MTERF2Q49AM1 385 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 CCDC40Q4G0X9 1142 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 KLHDC7AQ5VTJ3 777 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 TRIM65Q6PJ69 517 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 CYP26C1Q6V0L0 522 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 RAD9BQ6WBX8 426 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 ZPBP2Q6X784 338 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 INTS8Q75QN2 995 aaKnown RBP7.43□□□□□ -1.22
MSH5-217ENST00000494458 FAM186BQ8IYM0 893 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 XXYLT1Q8NBI6 393 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 TMC2Q8TDI7 906 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms