RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 SDHAP31040 664 aa3.16□□□□□ -1.9
PTPN12-212ENST00000494248 ARID5AQ03989 594 aa3.16□□□□□ -1.9
PTPN12-212ENST00000494248 CRY1Q16526 586 aa3.16□□□□□ -1.9
PTPN12-212ENST00000494248 ATG9BQ674R7 924 aa3.16□□□□□ -1.9
PTPN12-212ENST00000494248 ZNF425Q6IV72 752 aa3.16□□□□□ -1.9
PTPN12-212ENST00000494248 CRELD2Q6UXH1 353 aaPredicted RBP3.16□□□□□ -1.9
PTPN12-212ENST00000494248 LCORLQ8N3X6 602 aa3.16□□□□□ -1.9
PTPN12-212ENST00000494248 CALML6Q8TD86 181 aa3.16□□□□□ -1.9
PTPN12-212ENST00000494248 ST8SIA2Q92186 375 aa3.16□□□□□ -1.9
PTPN12-212ENST00000494248 GCDHQ92947 438 aaPredicted RBP3.16□□□□□ -1.9
PTPN12-212ENST00000494248 NKD2Q969F2 451 aaPredicted RBP3.16□□□□□ -1.9
PTPN12-212ENST00000494248 GFM2Q969S9 779 aaKnown RBP3.16□□□□□ -1.9
PTPN12-212ENST00000494248 COQ10AQ96MF6 247 aa3.16□□□□□ -1.9
PTPN12-212ENST00000494248 KCNH6Q9H252 994 aa3.16□□□□□ -1.9
PTPN12-212ENST00000494248 KCNH7Q9NS40 1196 aa3.16□□□□□ -1.9
PTPN12-212ENST00000494248 KIAA1522Q9P206 1035 aaPredicted RBP3.16□□□□□ -1.9
PTPN12-212ENST00000494248 SFMBT1Q9UHJ3 866 aa3.16□□□□□ -1.9
PTPN12-212ENST00000494248 CCDC66A2RUB6 948 aa3.15□□□□□ -1.91
PTPN12-212ENST00000494248 GOLGA8BA8MQT2 603 aa3.15□□□□□ -1.91
PTPN12-212ENST00000494248 TRIM24O15164 1050 aa3.15□□□□□ -1.91
PTPN12-212ENST00000494248 PPM1GO15355 546 aaPredicted RBP3.15□□□□□ -1.91
PTPN12-212ENST00000494248 H2AFYO75367 372 aaKnown RBP3.15□□□□□ -1.91
PTPN12-212ENST00000494248 C6orf222P0C671 652 aaPredicted RBP3.15□□□□□ -1.91
PTPN12-212ENST00000494248 MPLP40238 635 aa3.15□□□□□ -1.91
PTPN12-212ENST00000494248 FAM214AQ32MH5 1076 aa3.15□□□□□ -1.91
PTPN12-212ENST00000494248 DCAF17Q5H9S7 520 aaPredicted RBP3.15□□□□□ -1.91
PTPN12-212ENST00000494248 FAM47CQ5HY64 1035 aa3.15□□□□□ -1.91
PTPN12-212ENST00000494248 MFSD5Q6N075 450 aa3.15□□□□□ -1.91
PTPN12-212ENST00000494248 FAM9AQ8IZU1 332 aaPredicted RBP3.15□□□□□ -1.91
PTPN12-212ENST00000494248 ZNF384Q8TF68 577 aa3.15□□□□□ -1.91
PTPN12-212ENST00000494248 HNRNPLLQ8WVV9 542 aaKnown RBP3.15□□□□□ -1.91
PTPN12-212ENST00000494248 SLC46A2Q9BY10 475 aa3.15□□□□□ -1.91
PTPN12-212ENST00000494248 TEX101Q9BY14 249 aa3.15□□□□□ -1.91
PTPN12-212ENST00000494248 CPEB1Q9BZB8 566 aaKnown RBP3.15□□□□□ -1.91
PTPN12-212ENST00000494248 PCDHA8Q9Y5H6 950 aa3.15□□□□□ -1.91
PTPN12-212ENST00000494248 B3GALT1Q9Y5Z6 326 aa3.15□□□□□ -1.91
PTPN12-212ENST00000494248 GOLGA6L22H0YM25 854 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 MGST3O14880 152 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 FOXP2O15409 715 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 KLF4O43474 513 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 NCR1O76036 304 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 IPO13O94829 963 aaKnown RBP3.14□□□□□ -1.91
PTPN12-212ENST00000494248 TOX4O94842 621 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 ZFPL1O95159 310 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 CFBP00751 764 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 APOBEC3AP31941 199 aaPredicted RBP3.14□□□□□ -1.91
PTPN12-212ENST00000494248 KLHL22Q53GT1 634 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 CLEC14AQ86T13 490 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 MCF2L2Q86YR7 1114 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 DLG3Q92796 817 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 CAVIN3Q969G5 261 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 ZBTB9Q96C00 473 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 GBP4Q96PP9 640 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 NELL2Q99435 816 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 CDC6Q99741 560 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 FOXB1Q99853 325 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 BCCIPQ9P287 314 aaKnown RBP eCLIP3.14□□□□□ -1.91
PTPN12-212ENST00000494248 DENND2AQ9ULE3 1009 aa3.14□□□□□ -1.91
PTPN12-212ENST00000494248 PIPSLA2A3N6 862 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 ADCY3O60266 1144 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 RECQL4O94761 1208 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 NDUFA10O95299 355 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 VSIG10L2P0DP72 767 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 GYPEP15421 78 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 AVPR1BP47901 424 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 SUMO1P63165 101 aaKnown RBP3.13□□□□□ -1.91
PTPN12-212ENST00000494248 GABREP78334 506 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 GUCY1A3Q02108 690 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 ALDH6A1Q02252 535 aaKnown RBP3.13□□□□□ -1.91
PTPN12-212ENST00000494248 ANKS3Q6ZW76 656 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 BRAPQ7Z569 592 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 RTN4RL1Q86UN2 441 aaPredicted RBP3.13□□□□□ -1.91
PTPN12-212ENST00000494248 PLA2G15Q8NCC3 412 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 HIPK4Q8NE63 616 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 OR5AN1Q8NGI8 311 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 AKIP1Q9NQ31 210 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 SAE1Q9UBE0 346 aaPredicted RBP3.13□□□□□ -1.91
PTPN12-212ENST00000494248 ZNF70Q9UC06 446 aaPredicted RBP3.13□□□□□ -1.91
PTPN12-212ENST00000494248 RCAN3Q9UKA8 241 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 TLK1Q9UKI8 766 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 CHST2Q9Y4C5 530 aa3.13□□□□□ -1.91
PTPN12-212ENST00000494248 WDR91A4D1P6 747 aa3.12□□□□□ -1.91
PTPN12-212ENST00000494248 UNC119BA6NIH7 251 aa3.12□□□□□ -1.91
PTPN12-212ENST00000494248 TRIM38O00635 465 aa3.12□□□□□ -1.91
PTPN12-212ENST00000494248 RASGRP1O95267 797 aa3.12□□□□□ -1.91
PTPN12-212ENST00000494248 SRGAP2CP0DJJ0 459 aa3.12□□□□□ -1.91
PTPN12-212ENST00000494248 HKR1P10072 659 aa3.12□□□□□ -1.91
PTPN12-212ENST00000494248 SPIDRQ14159 915 aa3.12□□□□□ -1.91
PTPN12-212ENST00000494248 ERCC6LQ2NKX8 1250 aa3.12□□□□□ -1.91
PTPN12-212ENST00000494248 BEAN1Q3B7T3 259 aa3.12□□□□□ -1.91
PTPN12-212ENST00000494248 CATSPEREQ5SY80 951 aa3.12□□□□□ -1.91
PTPN12-212ENST00000494248 APBB1IPQ7Z5R6 666 aaPredicted RBP3.12□□□□□ -1.91
PTPN12-212ENST00000494248 ASB10Q8WXI3 467 aa3.12□□□□□ -1.91
PTPN12-212ENST00000494248 FOXRED1Q96CU9 486 aaPredicted RBP3.12□□□□□ -1.91
PTPN12-212ENST00000494248 FAM193BQ96PV7 902 aaPredicted RBP3.12□□□□□ -1.91
PTPN12-212ENST00000494248 ADAM2Q99965 735 aa3.12□□□□□ -1.91
PTPN12-212ENST00000494248 TINF2Q9BSI4 451 aa3.12□□□□□ -1.91
PTPN12-212ENST00000494248 SPATA9Q9BWV2 254 aa3.12□□□□□ -1.91
PTPN12-212ENST00000494248 CELF4Q9BZC1 486 aaKnown RBP3.12□□□□□ -1.91
PTPN12-212ENST00000494248 HAPLN2Q9GZV7 340 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms