RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 HSPBP1Q9NZL4 362 aa11.89□□□□□ -0.51
COL2A1-208ENST00000493991 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL2A1-208ENST00000493991 PCDHA10Q9Y5I2 948 aa11.89□□□□□ -0.51
COL2A1-208ENST00000493991 PGRMC1O00264 195 aaKnown RBP11.88□□□□□ -0.51
COL2A1-208ENST00000493991 SMARCA1P28370 1054 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 DHX9Q08211 1270 aaKnown RBP11.88□□□□□ -0.51
COL2A1-208ENST00000493991 SMAD1Q15797 465 aaKnown RBP11.88□□□□□ -0.51
COL2A1-208ENST00000493991 SLC18A3Q16572 532 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 BRDTQ58F21 947 aaPredicted RBP11.88□□□□□ -0.51
COL2A1-208ENST00000493991 FAM47CQ5HY64 1035 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 DPP9Q86TI2 863 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 POLR3FQ9H1D9 316 aaPredicted RBP11.88□□□□□ -0.51
COL2A1-208ENST00000493991 AGPAT3Q9NRZ7 376 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 STIM2Q9P246 746 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 FOXN3O00409 490 aaPredicted RBP11.88□□□□□ -0.51
COL2A1-208ENST00000493991 MYZAPP0CAP1 466 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 TMEM62Q0P6H9 643 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 BSPRYQ5W0U4 402 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 RHPN2Q8IUC4 686 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 SYCE1Q8N0S2 351 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 DHX38Q92620 1227 aaKnown RBP11.88□□□□□ -0.51
COL2A1-208ENST00000493991 KAT5Q92993 513 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 IWS1Q96ST2 819 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 TMEM206Q9H813 350 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 RNF19AQ9NV58 838 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 CD2APQ9Y5K6 639 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 STK24Q9Y6E0 443 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 TAF1P21675 1872 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 ATP9AO75110 1047 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 PSAPP07602 524 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 LMNB1P20700 586 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 MAPK4P31152 587 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 ARHGAP25P42331 645 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 CARSP49589 748 aaKnown RBP11.88□□□□□ -0.51
COL2A1-208ENST00000493991 PSMC5P62195 406 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 CNTN2Q02246 1040 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 TKFCQ3LXA3 575 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 KIAA1755Q5JYT7 1200 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 CYP4F22Q6NT55 531 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 PPP4R3CPQ6ZMV5 832 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 ELOA2Q8IYF1 753 aaPredicted RBP11.88□□□□□ -0.51
COL2A1-208ENST00000493991 C7orf31Q8N865 590 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 THOC1Q96FV9 657 aaKnown RBP11.88□□□□□ -0.51
COL2A1-208ENST00000493991 DNAJC7Q99615 494 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 LBHD1Q9BQE6 289 aaPredicted RBP11.88□□□□□ -0.51
COL2A1-208ENST00000493991 TBK1Q9UHD2 729 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 ROBO1Q9Y6N7 1651 aa11.88□□□□□ -0.51
COL2A1-208ENST00000493991 PON1P27169 355 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 KCNJ1P48048 391 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 KCNJ6P48051 423 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 MFAP3P55082 362 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 MIIPQ5JXC2 388 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 KLHDC7AQ5VTJ3 777 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 RSRC2Q7L4I2 434 aaKnown RBP11.87□□□□□ -0.51
COL2A1-208ENST00000493991 TRIM50Q86XT4 487 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 RPGRIP1Q96KN7 1286 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 TARS2Q9BW92 718 aaKnown RBP11.87□□□□□ -0.51
COL2A1-208ENST00000493991 MLXIPLQ9NP71 852 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 MTRF1LQ9UGC7 380 aaKnown RBP11.87□□□□□ -0.51
COL2A1-208ENST00000493991 ANAPC7Q9UJX3 599 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 ZNF233A6NK53 670 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 PDE2AO00408 941 aaPredicted RBP11.87□□□□□ -0.51
COL2A1-208ENST00000493991 DKC1O60832 514 aaKnown RBP eCLIP11.87□□□□□ -0.51
COL2A1-208ENST00000493991 LACTBP83111 547 aaPredicted RBP11.87□□□□□ -0.51
COL2A1-208ENST00000493991 HDLBPQ00341 1268 aaKnown RBP11.87□□□□□ -0.51
COL2A1-208ENST00000493991 STXBP2Q15833 593 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 SYCP2LQ5T4T6 812 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 MMS22LQ6ZRQ5 1243 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 OTOP1Q7RTM1 612 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 SYTL5Q8TDW5 730 aaPredicted RBP11.87□□□□□ -0.51
COL2A1-208ENST00000493991 MICAL1Q8TDZ2 1067 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 CPA5Q8WXQ8 436 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 ARL8AQ96BM9 186 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 GMCL1Q96IK5 515 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 JPH1Q9HDC5 661 aaPredicted RBP11.87□□□□□ -0.51
COL2A1-208ENST00000493991 TBC1D22BQ9NU19 505 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 REXO2Q9Y3B8 237 aaKnown RBP11.87□□□□□ -0.51
COL2A1-208ENST00000493991 BZW2Q9Y6E2 419 aaKnown RBP11.87□□□□□ -0.51
COL2A1-208ENST00000493991 DAPK3O43293 454 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 CNGA1P29973 690 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 ADCY8P40145 1251 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 IRAK1P51617 712 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 TUBB4BP68371 445 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 ORC1Q13415 861 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 ARSHQ5FYA8 562 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 MIS18BP1Q6P0N0 1132 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 INTS8Q75QN2 995 aaKnown RBP11.87□□□□□ -0.51
COL2A1-208ENST00000493991 ZNF571Q7Z3V5 609 aaPredicted RBP11.87□□□□□ -0.51
COL2A1-208ENST00000493991 TRIM51Q9BSJ1 452 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 TSKSQ9UJT2 592 aa11.87□□□□□ -0.51
COL2A1-208ENST00000493991 WDR46O15213 610 aaKnown RBP11.86□□□□□ -0.51
COL2A1-208ENST00000493991 GGPS1O95749 300 aa11.86□□□□□ -0.51
COL2A1-208ENST00000493991 ITGB5P18084 799 aa11.86□□□□□ -0.51
COL2A1-208ENST00000493991 CALRP27797 417 aaKnown RBP11.86□□□□□ -0.51
COL2A1-208ENST00000493991 NT5C2P49902 561 aa11.86□□□□□ -0.51
COL2A1-208ENST00000493991 PPP2R5DQ14738 602 aa11.86□□□□□ -0.51
COL2A1-208ENST00000493991 RNF25Q96BH1 459 aaPredicted RBP11.86□□□□□ -0.51
COL2A1-208ENST00000493991 IQCDQ96DY2 449 aa11.86□□□□□ -0.51
COL2A1-208ENST00000493991 TEX13BQ9BXU2 312 aa11.86□□□□□ -0.51
COL2A1-208ENST00000493991 NRBP2Q9NSY0 501 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms