RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 MCM2P49736 904 aa12.61□□□□□ -0.39
BRCA1-222ENST00000493919 SCNN1BP51168 640 aa12.61□□□□□ -0.39
BRCA1-222ENST00000493919 NLRP5P59047 1200 aa12.61□□□□□ -0.39
BRCA1-222ENST00000493919 ENOX2Q16206 610 aaKnown RBP12.61□□□□□ -0.39
BRCA1-222ENST00000493919 INAQ16352 499 aa12.61□□□□□ -0.39
BRCA1-222ENST00000493919 DCLK2Q8N568 766 aa12.61□□□□□ -0.39
BRCA1-222ENST00000493919 ARL6IP6Q8N6S5 226 aa12.61□□□□□ -0.39
BRCA1-222ENST00000493919 IL31RAQ8NI17 732 aa12.61□□□□□ -0.39
BRCA1-222ENST00000493919 TMX3Q96JJ7 454 aa12.61□□□□□ -0.39
BRCA1-222ENST00000493919 PDCD2LQ9BRP1 358 aa12.61□□□□□ -0.39
BRCA1-222ENST00000493919 DDX20Q9UHI6 824 aaKnown RBP12.61□□□□□ -0.39
BRCA1-222ENST00000493919 CORO1CQ9ULV4 474 aaPredicted RBP12.61□□□□□ -0.39
BRCA1-222ENST00000493919 PHF24Q9UPV7 400 aa12.61□□□□□ -0.39
BRCA1-222ENST00000493919 PRPF40AO75400 957 aaKnown RBP12.6□□□□□ -0.39
BRCA1-222ENST00000493919 PENKP01210 267 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-222ENST00000493919 GJB1P08034 283 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 NR3C2P08235 984 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 TROVE2P10155 538 aaKnown RBP eCLIP12.6□□□□□ -0.39
BRCA1-222ENST00000493919 AKR1A1P14550 325 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 EDNRBP24530 442 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 ADCYAP1R1P41586 468 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 DMPKQ09013 629 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 PGM5Q15124 567 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 GALNT15Q8N3T1 639 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 ZBTB8BQ8NAP8 495 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-222ENST00000493919 RASGRP4Q8TDF6 673 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 SHISA4Q96DD7 197 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 ERP27Q96DN0 273 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 EPSTI1Q96J88 318 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 ALG1Q9BT22 464 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 TTC12Q9H892 705 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-222ENST00000493919 TMEM260Q9NX78 707 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 MKL2Q9ULH7 1088 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 hCG_2014768A0A024R1R8 64 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 LINC00854A0A1B0GVQ3 168 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-222ENST00000493919 SLU7O95391 586 aaKnown RBP12.6□□□□□ -0.39
BRCA1-222ENST00000493919 GNA11P29992 359 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 CCND2P30279 289 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 FAM160A1Q05DH4 1040 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 ITIH3Q06033 890 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 STXBP2Q15833 593 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 ZCCHC8Q6NZY4 707 aaKnown RBP12.6□□□□□ -0.39
BRCA1-222ENST00000493919 REXO1Q8N1G1 1221 aaKnown RBP12.6□□□□□ -0.39
BRCA1-222ENST00000493919 KRI1Q8N9T8 703 aaKnown RBP12.6□□□□□ -0.39
BRCA1-222ENST00000493919 WASF1Q92558 559 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 HPS3Q969F9 1004 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 KATNBL1Q9H079 304 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 ZMYND12Q9H0C1 365 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 GLT8D2Q9H1C3 349 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 ZWILCHQ9H900 591 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 VTA1Q9NP79 307 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 PDGFCQ9NRA1 345 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 PAPOLBQ9NRJ5 636 aaKnown RBP12.6□□□□□ -0.39
BRCA1-222ENST00000493919 GJB4Q9NTQ9 266 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 KCNJ14Q9UNX9 436 aa12.6□□□□□ -0.39
BRCA1-222ENST00000493919 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.59□□□□□ -0.39
BRCA1-222ENST00000493919 ESYT2A0FGR8 921 aa12.59□□□□□ -0.39
BRCA1-222ENST00000493919 MGEA5O60502 916 aa12.59□□□□□ -0.39
BRCA1-222ENST00000493919 MSCO60682 206 aa12.59□□□□□ -0.39
BRCA1-222ENST00000493919 TFRCP02786 760 aaKnown RBP12.59□□□□□ -0.39
BRCA1-222ENST00000493919 RARBP10826 455 aa12.59□□□□□ -0.39
BRCA1-222ENST00000493919 FDPSP14324 419 aaKnown RBP12.59□□□□□ -0.39
BRCA1-222ENST00000493919 EN2P19622 333 aaPredicted RBP12.59□□□□□ -0.39
BRCA1-222ENST00000493919 HOXD11P31277 338 aaPredicted RBP12.59□□□□□ -0.39
BRCA1-222ENST00000493919 CFAP58Q5T655 872 aa12.59□□□□□ -0.39
BRCA1-222ENST00000493919 SVIPQ8NHG7 77 aa12.59□□□□□ -0.39
BRCA1-222ENST00000493919 ZFPM2Q8WW38 1151 aa12.59□□□□□ -0.39
BRCA1-222ENST00000493919 CLIP3Q96DZ5 547 aa12.59□□□□□ -0.39
BRCA1-222ENST00000493919 ANO3Q9BYT9 981 aa12.59□□□□□ -0.39
BRCA1-222ENST00000493919 ZHX3Q9H4I2 956 aa12.59□□□□□ -0.39
BRCA1-222ENST00000493919 EHMT1Q9H9B1 1298 aa12.59□□□□□ -0.39
BRCA1-222ENST00000493919 SH3GLB2Q9NR46 395 aa12.59□□□□□ -0.39
BRCA1-222ENST00000493919 FAM184BQ9ULE4 1060 aa12.59□□□□□ -0.39
BRCA1-222ENST00000493919 PCDHA6Q9UN73 950 aa12.59□□□□□ -0.39
BRCA1-222ENST00000493919 PCDHA8Q9Y5H6 950 aa12.59□□□□□ -0.39
BRCA1-222ENST00000493919 ADAMTS3O15072 1205 aa12.58□□□□□ -0.39
BRCA1-222ENST00000493919 ADCY6O43306 1168 aa12.58□□□□□ -0.39
BRCA1-222ENST00000493919 ZEB2O60315 1214 aa12.58□□□□□ -0.39
BRCA1-222ENST00000493919 SGPL1O95470 568 aa12.58□□□□□ -0.39
BRCA1-222ENST00000493919 SKIP12755 728 aa12.58□□□□□ -0.39
BRCA1-222ENST00000493919 CLCN6P51797 869 aa12.58□□□□□ -0.39
BRCA1-222ENST00000493919 KIF11P52732 1056 aa12.58□□□□□ -0.39
BRCA1-222ENST00000493919 PPIDQ08752 370 aaKnown RBP12.58□□□□□ -0.39
BRCA1-222ENST00000493919 AP3B2Q13367 1082 aa12.58□□□□□ -0.39
BRCA1-222ENST00000493919 PDAP1Q13442 181 aaKnown RBP12.58□□□□□ -0.39
BRCA1-222ENST00000493919 SMC1AQ14683 1233 aaKnown RBP12.58□□□□□ -0.39
BRCA1-222ENST00000493919 MAP7D1Q3KQU3 841 aa12.58□□□□□ -0.39
BRCA1-222ENST00000493919 THEMIS2Q5TEJ8 643 aa12.58□□□□□ -0.39
BRCA1-222ENST00000493919 NT5DC4Q86YG4 428 aa12.58□□□□□ -0.39
BRCA1-222ENST00000493919 BRSK2Q8IWQ3 736 aa12.58□□□□□ -0.39
BRCA1-222ENST00000493919 CEP112Q8N8E3 955 aa12.58□□□□□ -0.39
BRCA1-222ENST00000493919 TRIM58Q8NG06 486 aa12.58□□□□□ -0.39
BRCA1-222ENST00000493919 XPNPEP3Q9NQH7 507 aa12.58□□□□□ -0.39
BRCA1-222ENST00000493919 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.58□□□□□ -0.39
BRCA1-222ENST00000493919 FRMPD4Q14CM0 1322 aa12.58□□□□□ -0.4
BRCA1-222ENST00000493919 DYTNA2CJ06 578 aa12.58□□□□□ -0.4
BRCA1-222ENST00000493919 HOXA2O43364 376 aa12.58□□□□□ -0.4
BRCA1-222ENST00000493919 PTGS1P23219 599 aa12.58□□□□□ -0.4
BRCA1-222ENST00000493919 RRM1P23921 792 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms