RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 PPM1KQ8N3J5 372 aa6.38□□□□□ -1.39
CCNB3-208ENST00000493507 CISD2Q8N5K1 135 aaKnown RBP6.38□□□□□ -1.39
CCNB3-208ENST00000493507 C2orf69Q8N8R5 385 aa6.38□□□□□ -1.39
CCNB3-208ENST00000493507 CLEC4DQ8WXI8 215 aa6.38□□□□□ -1.39
CCNB3-208ENST00000493507 DDX1Q92499 740 aaKnown RBP6.38□□□□□ -1.39
CCNB3-208ENST00000493507 WNK4Q96J92 1243 aa6.38□□□□□ -1.39
CCNB3-208ENST00000493507 CD244Q9BZW8 370 aa6.38□□□□□ -1.39
CCNB3-208ENST00000493507 PRKRIP1Q9H875 184 aaPredicted RBP6.38□□□□□ -1.39
CCNB3-208ENST00000493507 CABP5Q9NP86 173 aa6.38□□□□□ -1.39
CCNB3-208ENST00000493507 TMOD3Q9NYL9 352 aa6.38□□□□□ -1.39
CCNB3-208ENST00000493507 HSPBP1Q9NZL4 362 aa6.38□□□□□ -1.39
CCNB3-208ENST00000493507 ATP23Q9Y6H3 246 aa6.38□□□□□ -1.39
CCNB3-208ENST00000493507 CARMIL3Q8ND23 1372 aa6.38□□□□□ -1.39
CCNB3-208ENST00000493507 SBF1O95248 1867 aa6.38□□□□□ -1.39
CCNB3-208ENST00000493507 CCDC88AQ3V6T2 1871 aa6.38□□□□□ -1.39
CCNB3-208ENST00000493507 TAF1P21675 1872 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 DDX60Q8IY21 1712 aaKnown RBP6.37□□□□□ -1.39
CCNB3-208ENST00000493507 PXDNLA1KZ92 1463 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 C10orf71Q711Q0 1435 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 ERVV-2B6SEH9 535 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 M0R2C6 588 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 MAN2B1O00754 1011 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 MMP10P09238 476 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 DPEP1P16444 411 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 MC3RP41968 323 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 NEK4P51957 841 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 KCNA10Q16322 511 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 PIK3R6Q5UE93 754 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 CDCA2Q69YH5 1023 aaPredicted RBP6.37□□□□□ -1.39
CCNB3-208ENST00000493507 CNNM4Q6P4Q7 775 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 MCM10Q7L590 875 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 DNAJC10Q8IXB1 793 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 RBM12BQ8IXT5 1001 aaKnown RBP6.37□□□□□ -1.39
CCNB3-208ENST00000493507 AHI1Q8N157 1196 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 SMARCC2Q8TAQ2 1214 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 SH3RF2Q8TEC5 729 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 SMURF1Q9HCE7 757 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 SRP68Q9UHB9 627 aaKnown RBP6.37□□□□□ -1.39
CCNB3-208ENST00000493507 KCTD3Q9Y597 815 aa6.37□□□□□ -1.39
CCNB3-208ENST00000493507 TIAM2Q8IVF5 1701 aa6.36□□□□□ -1.39
CCNB3-208ENST00000493507 MYBBP1AQ9BQG0 1328 aaKnown RBP6.36□□□□□ -1.39
CCNB3-208ENST00000493507 SLC12A8A0AV02 714 aa6.36□□□□□ -1.39
CCNB3-208ENST00000493507 CLASP2O75122 1294 aaKnown RBP6.36□□□□□ -1.39
CCNB3-208ENST00000493507 GLRX3O76003 335 aaKnown RBP6.36□□□□□ -1.39
CCNB3-208ENST00000493507 TOMM70O94826 608 aa6.36□□□□□ -1.39
CCNB3-208ENST00000493507 C8BP07358 591 aa6.36□□□□□ -1.39
CCNB3-208ENST00000493507 FAHP16930 419 aa6.36□□□□□ -1.39
CCNB3-208ENST00000493507 STAT5AP42229 794 aa6.36□□□□□ -1.39
CCNB3-208ENST00000493507 PIP4K2AP48426 406 aaPredicted RBP6.36□□□□□ -1.39
CCNB3-208ENST00000493507 LINC00310P59036 64 aa6.36□□□□□ -1.39
CCNB3-208ENST00000493507 GRIN1Q05586 938 aa6.36□□□□□ -1.39
CCNB3-208ENST00000493507 AMOTQ4VCS5 1084 aa6.36□□□□□ -1.39
CCNB3-208ENST00000493507 PAN2Q504Q3 1202 aaKnown RBP6.36□□□□□ -1.39
CCNB3-208ENST00000493507 BTBD8Q5XKL5 378 aa6.36□□□□□ -1.39
CCNB3-208ENST00000493507 CNKSR3Q6P9H4 555 aa6.36□□□□□ -1.39
CCNB3-208ENST00000493507 TEPPQ6URK8 271 aa6.36□□□□□ -1.39
CCNB3-208ENST00000493507 KIF18BQ86Y91 864 aa6.36□□□□□ -1.39
CCNB3-208ENST00000493507 ZNF496Q96IT1 587 aaPredicted RBP6.36□□□□□ -1.39
CCNB3-208ENST00000493507 ORAI3Q9BRQ5 295 aa6.36□□□□□ -1.39
CCNB3-208ENST00000493507 ZBTB1Q9Y2K1 713 aa6.36□□□□□ -1.39
CCNB3-208ENST00000493507 TELO2Q9Y4R8 837 aa6.36□□□□□ -1.39
CCNB3-208ENST00000493507 CEP350Q5VT06 3117 aa6.36□□□□□ -1.39
CCNB3-208ENST00000493507 HEG1Q9ULI3 1381 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 SOS1Q07889 1333 aaPredicted RBP6.35□□□□□ -1.39
CCNB3-208ENST00000493507 NPIPB6E9PJ23 425 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 LRG1P02750 347 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 LTFP02788 710 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 U2AF1L5P0DN76 240 aaPredicted RBP6.35□□□□□ -1.39
CCNB3-208ENST00000493507 MYCLP1P12525 358 aaPredicted RBP6.35□□□□□ -1.39
CCNB3-208ENST00000493507 GYS1P13807 737 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 PTPN1P18031 435 aaKnown RBP6.35□□□□□ -1.39
CCNB3-208ENST00000493507 CRKLP46109 303 aaKnown RBP6.35□□□□□ -1.39
CCNB3-208ENST00000493507 TGFB2P61812 414 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 U2AF1Q01081 240 aaKnown RBP eCLIP6.35□□□□□ -1.39
CCNB3-208ENST00000493507 DDR1Q08345 913 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 SSPNQ14714 243 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 ZNF124Q15973 351 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 CR1LQ2VPA4 569 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 OTOP1Q7RTM1 612 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 FAM129CQ86XR2 697 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 CCDC146Q8IYE0 955 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 TMEFF1Q8IYR6 380 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 FAM26EQ8N5C1 309 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 CHST14Q8NCH0 376 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 TARS2Q9BW92 718 aaKnown RBP6.35□□□□□ -1.39
CCNB3-208ENST00000493507 BOCQ9BWV1 1114 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 RIC8BQ9NVN3 520 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 MIS18AQ9NYP9 233 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 MAPRE3Q9UPY8 281 aa6.35□□□□□ -1.39
CCNB3-208ENST00000493507 RRP7AQ9Y3A4 280 aaKnown RBP6.35□□□□□ -1.39
CCNB3-208ENST00000493507 FER1L6Q2WGJ9 1857 aa6.34□□□□□ -1.39
CCNB3-208ENST00000493507 SLX4Q8IY92 1834 aa6.34□□□□□ -1.39
CCNB3-208ENST00000493507 SPEF2Q9C093 1822 aa6.34□□□□□ -1.39
CCNB3-208ENST00000493507 A0A1B0GUL6 1792 aa6.34□□□□□ -1.39
CCNB3-208ENST00000493507 COL15A1P39059 1388 aa6.34□□□□□ -1.39
CCNB3-208ENST00000493507 CBX4O00257 560 aa6.34□□□□□ -1.39
CCNB3-208ENST00000493507 HIP1RO75146 1068 aa6.34□□□□□ -1.39
CCNB3-208ENST00000493507 CYP19A1P11511 503 aaPredicted RBP6.34□□□□□ -1.39
CCNB3-208ENST00000493507 PI3P19957 117 aa6.34□□□□□ -1.39
CCNB3-208ENST00000493507 LIMS1P48059 325 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms