RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 TCF25Q9BQ70 676 aa9.78□□□□□ -0.84
NUP50-217ENST00000491860 FDXACB1Q9BRP7 624 aaPredicted RBP9.78□□□□□ -0.84
NUP50-217ENST00000491860 LARP6Q9BRS8 491 aaKnown RBP9.78□□□□□ -0.84
NUP50-217ENST00000491860 LXNQ9BS40 222 aa9.78□□□□□ -0.84
NUP50-217ENST00000491860 PHF7Q9BWX1 381 aaPredicted RBP9.78□□□□□ -0.84
NUP50-217ENST00000491860 FAM105AQ9NUU6 356 aa9.78□□□□□ -0.84
NUP50-217ENST00000491860 CLEC1BQ9P126 229 aa9.78□□□□□ -0.84
NUP50-217ENST00000491860 PCDHA12Q9UN75 941 aa9.78□□□□□ -0.84
NUP50-217ENST00000491860 TECTAO75443 2155 aa9.78□□□□□ -0.84
NUP50-217ENST00000491860 KMT2EQ8IZD2 1858 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 EML1O00423 815 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 LINC01565O15544 149 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 NEMFO60524 1076 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 ERLIN2O94905 339 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 CSPG5O95196 566 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 LYPLA2O95372 231 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 XRCC6P12956 609 aaKnown RBP eCLIP9.77□□□□□ -0.85
NUP50-217ENST00000491860 GTF2F1P35269 517 aaKnown RBP eCLIP9.77□□□□□ -0.85
NUP50-217ENST00000491860 RNASELQ05823 741 aaKnown RBP9.77□□□□□ -0.85
NUP50-217ENST00000491860 ITIH3Q06033 890 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 POU5F1BQ06416 359 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 ORC2Q13416 577 aaPredicted RBP9.77□□□□□ -0.85
NUP50-217ENST00000491860 CBX2Q14781 532 aaPredicted RBP9.77□□□□□ -0.85
NUP50-217ENST00000491860 CLUL1Q15846 466 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 CALCRLQ16602 461 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 CLLU1OSQ5K130 101 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 PLPP4Q5VZY2 271 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 NCAPH2Q6IBW4 605 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 PPFIBP1Q86W92 1011 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 RNF135Q8IUD6 432 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 HACE1Q8IYU2 909 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 SLC39A11Q8N1S5 342 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 HELQQ8TDG4 1101 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 HAS1Q92839 578 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 GJA10Q969M2 543 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 NLRP4Q96MN2 994 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 NECTIN4Q96NY8 510 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 MTRQ99707 1265 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 IFT122Q9HBG6 1241 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 AGPAT5Q9NUQ2 364 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 RNF19AQ9NV58 838 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 DZANK1Q9NVP4 752 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 MUTYHQ9UIF7 546 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 IRAK3Q9Y616 596 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 CFAP54Q96N23 3096 aa9.77□□□□□ -0.85
NUP50-217ENST00000491860 LOC730098B7Z3J9 87 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 DGAT1O75907 488 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 GLP2RO95838 553 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 NEK4P51957 841 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 BCAR1P56945 870 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 ERVFC1P60507 584 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 FOXK2Q01167 660 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 DRP2Q13474 957 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 KCNC3Q14003 757 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 EMC2Q15006 297 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 XKR9Q5GH70 373 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 NOMO2Q5JPE7 1267 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 CES5AQ6NT32 575 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 ANKRD54Q6NXT1 300 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 ELMSAN1Q6PJG2 1045 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 LRRC55Q6ZSA7 311 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 TRIM67Q6ZTA4 783 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 DDX53Q86TM3 631 aaKnown RBP9.76□□□□□ -0.85
NUP50-217ENST00000491860 POTEDQ86YR6 584 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 MRPL43Q8N983 215 aaKnown RBP9.76□□□□□ -0.85
NUP50-217ENST00000491860 PRPF31Q8WWY3 499 aaKnown RBP9.76□□□□□ -0.85
NUP50-217ENST00000491860 SUSD6Q92537 303 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 ZNF668Q96K58 619 aaPredicted RBP9.76□□□□□ -0.85
NUP50-217ENST00000491860 FAM193BQ96PV7 902 aaPredicted RBP9.76□□□□□ -0.85
NUP50-217ENST00000491860 PHOX2BQ99453 314 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 TMEM175Q9BSA9 504 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 NFKBIZQ9BYH8 718 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 ANKEF1Q9NU02 776 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 DPP7Q9UHL4 492 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 BARX2Q9UMQ3 279 aaPredicted RBP9.76□□□□□ -0.85
NUP50-217ENST00000491860 SSX2IPQ9Y2D8 614 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 NR2E1Q9Y466 385 aa9.76□□□□□ -0.85
NUP50-217ENST00000491860 USP15Q9Y4E8 981 aaPredicted RBP9.76□□□□□ -0.85
NUP50-217ENST00000491860 ZMYM2Q9UBW7 1377 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 ARID2Q68CP9 1835 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 TMEM221A6NGB7 291 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 M0R296 226 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 PER2O15055 1255 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 ZC3H11AO75152 810 aaKnown RBP eCLIP9.75□□□□□ -0.85
NUP50-217ENST00000491860 NR1I2O75469 434 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 SLITRK3O94933 977 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 CTDNEP1O95476 244 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 NCLP19338 710 aaKnown RBP9.75□□□□□ -0.85
NUP50-217ENST00000491860 FGFR4P22455 802 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 TECP42680 631 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 MTHFRP42898 656 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 NPEPPSP55786 919 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 SPIRE1Q08AE8 756 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 LAMTOR4Q0VGL1 99 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 ME3Q16798 604 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 PLA2G4FQ68DD2 849 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 NOTUMQ6P988 496 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 MRPL10Q7Z7H8 261 aaKnown RBP9.75□□□□□ -0.85
NUP50-217ENST00000491860 FERMT3Q86UX7 667 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 IFNLR1Q8IU57 520 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms