RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ZKSCAN2Q63HK3 967 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 KCNT2Q6UVM3 1135 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 CYFIP1Q7L576 1253 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 VWA5B2Q8N398 1253 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 SLC44A3Q8N4M1 653 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 KDF1Q8NAX2 398 aaPredicted RBP8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 SECISBP2LQ93073 1101 aaKnown RBP8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 NACAP1Q9BZK3 213 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 UBA5Q9GZZ9 404 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 TCP11L1Q9NUJ3 509 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 RNF19AQ9NV58 838 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 ZSCAN32Q9NX65 697 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 PCDHB7Q9Y5E2 793 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 TRPV2Q9Y5S1 764 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 SPTA1P02549 2419 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 KDM3AQ9Y4C1 1321 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 RALGAPA1Q6GYQ0 2036 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 LAMA4Q16363 1823 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 SLC35F4A4IF30 521 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 C1QTNF9BB2RNN3 333 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 TBC1D4O60343 1298 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 ZFYP08048 801 aaPredicted RBP8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 C1QTNF9P0C862 333 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 FGFR1P11362 822 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 IBSPP21815 317 aaPredicted RBP8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 STARD6P59095 220 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 SPEM2Q0P670 501 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 TMEM266Q2M3C6 531 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 QRICH1Q2TAL8 776 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 LETM2Q2VYF4 491 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 GPATCH4Q5T3I0 446 aaKnown RBP8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 LRSAM1Q6UWE0 723 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 SV2AQ7L0J3 742 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 SIRT2Q8IXJ6 389 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 SLC39A11Q8N1S5 342 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 GALNT6Q8NCL4 622 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 ATRIPQ8WXE1 791 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 INPP4AQ96PE3 977 aaPredicted RBP8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 DDX23Q9BUQ8 820 aaKnown RBP8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 FAM49AQ9H0Q0 323 aaPredicted RBP8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 BCL11AQ9H165 835 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 RGS18Q9NS28 235 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 EPS15L1Q9UBC2 864 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 ANAPC4Q9UJX5 808 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 MRPL11Q9Y3B7 192 aaKnown RBP8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 IRAK3Q9Y616 596 aa8.25□□□□□ -1.09
PDLIM1-203ENST00000490391 SPATA31C2B4DYI2 1134 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 TM4SF5O14894 197 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 LAMTOR5O43504 91 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 LRP3O75074 770 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 RPLP2P05387 115 aaKnown RBP8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 FAM189BP81408 668 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 MRPS9P82933 396 aaKnown RBP8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 KRT17Q04695 432 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 CSTF1Q05048 431 aaKnown RBP8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 TMEM62Q0P6H9 643 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 NEDD9Q14511 834 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 IER5Q5VY09 327 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 DCLRE1AQ6PJP8 1040 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 UNQ6494/PRO21346Q6UXR6 183 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 C15orf39Q6ZRI6 1047 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 SLC24A5Q71RS6 500 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 ITPRIPQ8IWB1 547 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 ADGRF4Q8IZF3 695 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 AUTS2Q8WXX7 1259 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 FOXJ1Q92949 421 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 ZNF558Q96NG5 402 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 CASD1Q96PB1 797 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 ADAM2Q99965 735 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 CELF4Q9BZC1 486 aaKnown RBP8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 TMEM117Q9H0C3 514 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 ZBP1Q9H171 429 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 SFXN1Q9H9B4 322 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 SLC2A4RGQ9NR83 387 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 C1orf112Q9NSG2 853 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 SPATA6Q9NWH7 488 aaPredicted RBP8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 TMEM161AQ9NX61 479 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 SPG21Q9NZD8 308 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 GMEB2Q9UKD1 530 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 FRMPD4Q14CM0 1322 aa8.24□□□□□ -1.09
PDLIM1-203ENST00000490391 USP9XQ93008 2570 aaPredicted RBP8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 TAF4O00268 1085 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 ANP32CO43423 234 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 RAB11FIP3O75154 756 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 CELA2BP08218 269 aaPredicted RBP8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 TDGF1P13385 188 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 CCND2P30279 289 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 HOXA13P31271 388 aaPredicted RBP8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 TCF7P36402 384 aaPredicted RBP8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 RING1Q06587 406 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 WTAPQ15007 396 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 NONOQ15233 471 aaKnown RBP eCLIP8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 DESI1Q6ICB0 168 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 FAM43BQ6ZT52 329 aaPredicted RBP8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 CABP7Q86V35 215 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 TMEM173Q86WV6 379 aaPredicted RBP8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 TMEM40Q8WWA1 233 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 DDX1Q92499 740 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms